CoV-GLUE Mutations

CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = B.6.2

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LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage:

ORF:

Mutation type:

Min count:

Min prop:

Lineage = B.6.2 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5

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Lineage	ORF	CodonNum	Mutation	ORF1ab	MutType	C1	C2	C3	RefCodon	MutCodon	Count	Proportion
B.6.2	ORF1ab/nsp3	1198	T1198K	T2016K	nonsyn	6311	6312	6313	aCa	aAa	16	1
B.6.2	ORF1ab/nsp6	37	L37F	L3606F	nonsyn	11081	11082	11083	ttG	ttT	15	0.9375
B.6.2	ORF1ab/nsp10	102	T102I	T4355I	nonsyn	13328	13329	13330	aCt	aTt	16	1
B.6.2	ORF1ab/nsp12	97	A97V	A4489V	nonsyn	13729	13730	13731	gCt	gTt	16	1
B.6.2	ORF1ab/nsp16	55	N55N	N6853N	syn	20821	20822	20823	aaC	aaT	16	1
B.6.2	S	789	Y789Y		syn	23927	23928	23929	taC	taT	16	1
B.6.2	M	29	L29F		nonsyn	26607	26608	26609	Ctt	Ttt	16	1
B.6.2	N	13	P13L		nonsyn	28310	28311	28312	cCc	cTc	16	1
B.6.2	N	271	T271T		syn	29084	29085	29086	acA	acT	16	1
B.6.2	N	315	F315F		syn	29216	29217	29218	ttC	ttT	16	1

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.