CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.99.1

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.99.1 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.99.1noncoding210G210Tnoncoding210210210GT6190.96118
AY.99.1noncoding241C241Tnoncoding241241241CT6200.962733
AY.99.1ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT6441
AY.99.1ORF1ab/nsp3273I273VI1091Vnonsyn353635373538AtaGta6160.956522
AY.99.1ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct6400.993789
AY.99.1ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa6380.990683
AY.99.1ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct6300.978261
AY.99.1ORF1ab/nsp31791L1791FL2609Fnonsyn809080918092CtcTtc3270.507764
AY.99.1ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT6150.954969
AY.99.1ORF1ab/nsp4147T147IT2910Inonsyn899389948995aCaaTa6080.944099
AY.99.1ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta6230.967391
AY.99.1ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc5860.909938
AY.99.1ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct6380.990683
AY.99.1ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG6400.993789
AY.99.1ORF1ab/nsp1064D64DD4317Dsyn132141321513216gaTgaC6170.958075
AY.99.1ORF1ab/nsp10125G125CG4378Cnonsyn133971339813399GgtTgt3260.506211
AY.99.1ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt6400.993789
AY.99.1ORF1ab/nsp12600N600NN4992Nsyn152381523915240aaCaaT6130.951863
AY.99.1ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt6430.998447
AY.99.1ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa6430.998447
AY.99.1ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt6340.984472
AY.99.1S19T19Rnonsyn216172161821619aCaaGa6360.987578
AY.99.1S156E156deldel220282202922030GAG---5730.889752
AY.99.1S157F157deldel220312203222033TTC---5730.889752
AY.99.1S158R158Gnonsyn220342203522036AgaGga5720.888199
AY.99.1S452L452Rnonsyn229162291722918cTgcGg5990.930124
AY.99.1S478T478Knonsyn229942299522996aCaaAa6040.937888
AY.99.1S614D614Gnonsyn234022340323404gAtgGt6441
AY.99.1S681P681Rnonsyn236032360423605cCtcGt6400.993789
AY.99.1S950D950Nnonsyn244102441124412GatAat6200.962733
AY.99.1ORF3a26S26Lnonsyn254682546925470tCatTa6400.993789
AY.99.1M82I82Tnonsyn267662676726768aTcaCc6441
AY.99.1ORF7a82V82Anonsyn276372763827639gTtgCt6230.967391
AY.99.1ORF7a120T120Inonsyn277512775227753aCaaTa6300.978261
AY.99.1ORF7b40T40Inonsyn278732787427875aCtaTt6310.979814
AY.99.1ORF8106E106Xnonsyn282092821028211GaaTaa3450.535714
AY.99.1ORF8119D119deldel282482824928250GAT---6160.956522
AY.99.1ORF8120F120deldel282512825228253TTC---6160.956522
AY.99.1noncoding28271A28271-noncoding282712827128271A-6070.942547
AY.99.1N63D63Gnonsyn284602846128462gAcgGc6320.981366
AY.99.1N203R203Mnonsyn288802888128882aGgaTg6430.998447
AY.99.1N215G215Cnonsyn289162891728918GgtTgt6390.992236
AY.99.1N377D377Ynonsyn294022940329404GatTat6350.986025
AY.99.1noncoding29543G29543Tnoncoding295432954329543GT3470.53882
AY.99.1noncoding29742G29742Tnoncoding297422974229742GT6220.965839