CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.90

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.90 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.90noncoding210G210Tnoncoding210210210GT13640.933607
AY.90noncoding241C241Tnoncoding241241241CT13880.950034
AY.90ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT14611
AY.90ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct14490.991786
AY.90ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa14330.980835
AY.90ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct14260.976044
AY.90ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT13770.942505
AY.90ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta13710.938398
AY.90ORF1ab/nsp4233V233IV2996Inonsyn925192529253GttAtt12350.845311
AY.90ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc14490.991786
AY.90ORF1ab/nsp637L37FL3606Fnonsyn110811108211083ttGttT12690.868583
AY.90ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct14480.991102
AY.90ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG14470.990418
AY.90ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt14530.994524
AY.90ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt14420.986995
AY.90ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa14611
AY.90ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt14490.991786
AY.90S19T19Rnonsyn216172161821619aCaaGa14550.995893
AY.90S142G142Dnonsyn219862198721988gGtgAt11300.773443
AY.90S156E156deldel220282202922030GAG---13520.925394
AY.90S157F157deldel220312203222033TTC---13520.925394
AY.90S158R158Gnonsyn220342203522036AgaGga13510.924709
AY.90S452L452Rnonsyn229162291722918cTgcGg14290.978097
AY.90S478T478Knonsyn229942299522996aCaaAa14280.977413
AY.90S614D614Gnonsyn234022340323404gAtgGt14611
AY.90S681P681Rnonsyn236032360423605cCtcGt14611
AY.90S950D950Nnonsyn244102441124412GatAat14540.995209
AY.90ORF3a26S26Lnonsyn254682546925470tCatTa14600.999316
AY.90ORF3a180S180Fnonsyn259302593125932tCttTt12810.876797
AY.90M66V66Vsyn267182671926720gtGgtA12490.854894
AY.90M82I82Tnonsyn267662676726768aTcaCc14611
AY.90ORF7a82V82Anonsyn276372763827639gTtgCt14240.974675
AY.90ORF7a120T120Inonsyn277512775227753aCaaTa14300.978782
AY.90ORF7b40T40Inonsyn278732787427875aCtaTt14480.991102
AY.90ORF833V33Fnonsyn279902799127992GttTtt14040.960986
AY.90ORF8119D119deldel282482824928250GAT---14530.994524
AY.90ORF8120F120deldel282512825228253TTC---14510.993155
AY.90noncoding28271A28271-noncoding282712827128271A-14190.971253
AY.90N63D63Gnonsyn284602846128462gAcgGc14580.997947
AY.90N154N154Nsyn287332873428735aaTaaC13000.889802
AY.90N203R203Mnonsyn288802888128882aGgaTg14590.998631
AY.90N215G215Cnonsyn289162891728918GgtTgt14400.985626
AY.90N377D377Ynonsyn294022940329404GatTat14540.995209
AY.90noncoding29742G29742Tnoncoding297422974229742GT14320.980151