CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.9.2.1

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LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.9.2.1 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.9.2.1noncoding210G210Tnoncoding210210210GT4980.98419
AY.9.2.1noncoding241C241Tnoncoding241241241CT4990.986166
AY.9.2.1ORF1ab/nsp2128S128SS308Ssyn118711881189tcAtcC5061
AY.9.2.1ORF1ab/nsp2308V308VV488Vsyn172717281729gtGgtA5061
AY.9.2.1ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT5061
AY.9.2.1ORF1ab/nsp3822P822LP1640Lnonsyn518351845185cCtcTt5061
AY.9.2.1ORF1ab/nsp3955T955TT1773Tsyn558255835584acAacG4820.952569
AY.9.2.1ORF1ab/nsp31145L1145LL1963Lsyn615261536154TtaCta5061
AY.9.2.1ORF1ab/nsp4446A446VA3209Vnonsyn989098919892gCtgTt5061
AY.9.2.1ORF1ab/nsp637L37FL3606Fnonsyn110811108211083ttGttT5061
AY.9.2.1ORF1ab/nsp6149V149AV3718Anonsyn114171141811419gTtgCt5061
AY.9.2.1ORF1ab/nsp6181T181IT3750Inonsyn115131151411515aCtaTt5061
AY.9.2.1ORF1ab/nsp9112L112LL4252Lsyn130191302013021CtaTta5061
AY.9.2.1ORF1ab/nsp12197R197QR4589Qnonsyn140291403014031cGacAa5061
AY.9.2.1ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt5061
AY.9.2.1ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt5061
AY.9.2.1ORF1ab/nsp12884Y884YY5276Ysyn160901609116092taCtaT5061
AY.9.2.1ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa5061
AY.9.2.1ORF1ab/nsp14A2-B16T16IT5941Inonsyn180851808618087aCtaTt5040.996047
AY.9.2.1S19T19Rnonsyn216172161821619aCaaGa5061
AY.9.2.1S142G142Dnonsyn219862198721988gGtgAt3880.766798
AY.9.2.1S156E156deldel220282202922030GAG---4730.934783
AY.9.2.1S157F157deldel220312203222033TTC---4730.934783
AY.9.2.1S158R158Gnonsyn220342203522036AgaGga4730.934783
AY.9.2.1S222A222Vnonsyn222262222722228gCtgTt4970.982213
AY.9.2.1S410I410Isyn227902279122792atCatT5061
AY.9.2.1S452L452Rnonsyn229162291722918cTgcGg5050.998024
AY.9.2.1S478T478Knonsyn229942299522996aCaaAa5061
AY.9.2.1S614D614Gnonsyn234022340323404gAtgGt5061
AY.9.2.1S681P681Rnonsyn236032360423605cCtcGt5061
AY.9.2.1S950D950Nnonsyn244102441124412GatAat5061
AY.9.2.1ORF3a26S26Lnonsyn254682546925470tCatTa5061
AY.9.2.1M82I82Tnonsyn267662676726768aTcaCc5061
AY.9.2.1ORF7a82V82Anonsyn276372763827639gTtgCt5050.998024
AY.9.2.1ORF7a120T120Inonsyn277512775227753aCaaTa5050.998024
AY.9.2.1ORF8119D119deldel282482824928250GAT---5061
AY.9.2.1ORF8120F120deldel282512825228253TTC---5061
AY.9.2.1noncoding28271A28271-noncoding282712827128271A-5040.996047
AY.9.2.1N63D63Gnonsyn284602846128462gAcgGc5061
AY.9.2.1N203R203Mnonsyn288802888128882aGgaTg5061
AY.9.2.1N377D377Ynonsyn294022940329404GatTat5061
AY.9.2.1noncoding29742G29742Tnoncoding297422974229742GT5061