CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.88

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.88 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.88noncoding210G210Tnoncoding210210210GT11010.973475
AY.88noncoding241C241Tnoncoding241241241CT11070.97878
AY.88ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT11240.993811
AY.88ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct11080.979664
AY.88ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa10770.952255
AY.88ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct10770.952255
AY.88ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT11060.977896
AY.88ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta11010.973475
AY.88ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc11030.975243
AY.88ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct11000.972591
AY.88ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG10630.939876
AY.88ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt11250.994695
AY.88ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt11110.982317
AY.88ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa11240.993811
AY.88ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt10940.967286
AY.88ORF1ab/nsp1617M17IM6815Inonsyn207072070820709atGatT9270.819629
AY.88S19T19Rnonsyn216172161821619aCaaGa11090.980548
AY.88S156E156deldel220282202922030GAG---9180.811671
AY.88S157F157deldel220312203222033TTC---9130.80725
AY.88S158R158Gnonsyn220342203522036AgaGga9110.805482
AY.88S452L452Rnonsyn229162291722918cTgcGg10990.971706
AY.88S478T478Knonsyn229942299522996aCaaAa11050.977011
AY.88S614D614Gnonsyn234022340323404gAtgGt11300.999116
AY.88S681P681Rnonsyn236032360423605cCtcGt11240.993811
AY.88S950D950Nnonsyn244102441124412GatAat10710.94695
AY.88ORF3a26S26Lnonsyn254682546925470tCatTa11280.997347
AY.88M82I82Tnonsyn267662676726768aTcaCc11311
AY.88ORF7a82V82Anonsyn276372763827639gTtgCt9100.804598
AY.88ORF7a120T120Inonsyn277512775227753aCaaTa9330.824934
AY.88ORF7b40T40Inonsyn278732787427875aCtaTt10870.961096
AY.88ORF8119D119deldel282482824928250GAT---10880.961981
AY.88ORF8120F120deldel282512825228253TTC---10880.961981
AY.88noncoding28271A28271-noncoding282712827128271A-10050.888594
AY.88N63D63Gnonsyn284602846128462gAcgGc11090.980548
AY.88N151P151Snonsyn287242872528726CctTct10700.946065
AY.88N203R203Mnonsyn288802888128882aGgaTg11240.993811
AY.88N215G215Cnonsyn289162891728918GgtTgt11030.975243
AY.88N377D377Ynonsyn294022940329404GatTat11050.977011
AY.88noncoding29742G29742Tnoncoding297422974229742GT10520.93015