CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.7.1

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LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.7.1 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.7.1noncoding210G210Tnoncoding210210210GT88040.992224
AY.7.1noncoding241C241Tnoncoding241241241CT88060.992449
AY.7.1ORF1ab/nsp375L75LL893Lsyn294229432944ctGctA88340.995605
AY.7.1ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT88600.998535
AY.7.1ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct88530.997746
AY.7.1ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa88350.995717
AY.7.1ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct87280.983658
AY.7.1ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT88560.998084
AY.7.1ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta88360.99583
AY.7.1ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc88550.997971
AY.7.1ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct88570.998197
AY.7.1ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG88500.997408
AY.7.1ORF1ab/nsp6131V131VV3700Vsyn113631136411365gtGgtT88360.99583
AY.7.1ORF1ab/nsp911Q11HQ4151Hnonsyn127161271712718caGcaT86840.978699
AY.7.1ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt88630.998873
AY.7.1ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt88650.999098
AY.7.1ORF1ab/nsp12814S814SS5206Ssyn158801588115882tcTtcG86630.976333
AY.7.1ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa88680.999436
AY.7.1ORF1ab/nsp14A2-B212R212RR6137Rsyn186731867418675agAagG88710.999775
AY.7.1ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt88490.997295
AY.7.1S19T19Rnonsyn216172161821619aCaaGa88000.991773
AY.7.1S142G142Dnonsyn219862198721988gGtgAt60960.687028
AY.7.1S156E156deldel220282202922030GAG---84590.953342
AY.7.1S157F157deldel220312203222033TTC---84470.951989
AY.7.1S158R158Gnonsyn220342203522036AgaGga84430.951538
AY.7.1S452L452Rnonsyn229162291722918cTgcGg87640.987716
AY.7.1S478T478Knonsyn229942299522996aCaaAa87770.989181
AY.7.1S614D614Gnonsyn234022340323404gAtgGt88690.999549
AY.7.1S681P681Rnonsyn236032360423605cCtcGt88560.998084
AY.7.1S950D950Nnonsyn244102441124412GatAat86600.975995
AY.7.1ORF3a26S26Lnonsyn254682546925470tCatTa88650.999098
AY.7.1M82I82Tnonsyn267662676726768aTcaCc88731
AY.7.1ORF7a58C58Fnonsyn275652756627567tGctTc80560.907923
AY.7.1ORF7a79A79Dnonsyn276282762927630gCcgAc81740.921222
AY.7.1ORF7a82V82Anonsyn276372763827639gTtgCt82650.931478
AY.7.1ORF7a120T120Inonsyn277512775227753aCaaTa82980.935197
AY.7.1ORF7b40T40Inonsyn278732787427875aCtaTt88460.996957
AY.7.1ORF8119D119deldel282482824928250GAT---87880.99042
AY.7.1ORF8120F120deldel282512825228253TTC---87810.989631
AY.7.1noncoding28271A28271-noncoding282712827128271A-86970.980165
AY.7.1N63D63Gnonsyn284602846128462gAcgGc86980.980277
AY.7.1N203R203Mnonsyn288802888128882aGgaTg88470.99707
AY.7.1N215G215Cnonsyn289162891728918GgtTgt88230.994365
AY.7.1N377D377Ynonsyn294022940329404GatTat88090.992787
AY.7.1noncoding29742G29742Tnoncoding297422974229742GT68810.775499