CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.54

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.54 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.54noncoding193C193Tnoncoding193193193CT90400.861937
AY.54noncoding210G210Tnoncoding210210210GT102100.973494
AY.54noncoding241C241Tnoncoding241241241CT101380.966629
AY.54ORF1ab/nsp2129P129LP309Lnonsyn119011911192cCacTa99670.950324
AY.54ORF1ab/nsp2154G154GG334Gsyn126512661267ggCggT100520.958429
AY.54ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT104010.991705
AY.54ORF1ab/nsp3822P822LP1640Lnonsyn518351845185cCtcTt99230.946129
AY.54ORF1ab/nsp4446A446VA3209Vnonsyn989098919892gCtgTt100600.959191
AY.54ORF1ab/nsp6149V149AV3718Anonsyn114171141811419gTtgCt100410.95738
AY.54ORF1ab/nsp987Y87YY4227Ysyn129441294512946taTtaC99810.951659
AY.54ORF1ab/nsp12249R249RR4641Rsyn141851418614187agGagA98250.936785
AY.54ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt104550.996854
AY.54ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt103550.987319
AY.54ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa104040.991991
AY.54ORF1ab/nsp14A2-B46P46LP5971Lnonsyn181751817618177cCtcTt98950.943459
AY.54ORF1ab/nsp14A2-B374S374FS6299Fnonsyn191591916019161tCttTt99750.951087
AY.54ORF1ab/nsp15A1-B214L214LL6666Lsyn202602026120262ttAttG95900.914378
AY.54S19T19Rnonsyn216172161821619aCaaGa102590.978166
AY.54S142G142Dnonsyn219862198721988gGtgAt55180.526125
AY.54S156E156deldel220282202922030GAG---92490.881865
AY.54S157F157deldel220312203222033TTC---92520.882151
AY.54S158R158Gnonsyn220342203522036AgaGga92800.884821
AY.54S452L452Rnonsyn229162291722918cTgcGg100750.960622
AY.54S478T478Knonsyn229942299522996aCaaAa101250.965389
AY.54S614D614Gnonsyn234022340323404gAtgGt104810.999333
AY.54S681P681Rnonsyn236032360423605cCtcGt104570.997044
AY.54S950D950Nnonsyn244102441124412GatAat101560.968345
AY.54ORF3a26S26Lnonsyn254682546925470tCatTa104740.998665
AY.54ORF3a138P138Psyn258042580525806ccAccG95290.908562
AY.54M82I82Tnonsyn267662676726768aTcaCc103370.985603
AY.54ORF7a82V82Anonsyn276372763827639gTtgCt97720.931732
AY.54ORF7a116L116Fnonsyn277392774027741CtcTtc92440.881388
AY.54ORF7a120T120Inonsyn277512775227753aCaaTa98230.936594
AY.54ORF8119D119deldel282482824928250GAT---99660.950229
AY.54ORF8120F120deldel282512825228253TTC---100010.953566
AY.54noncoding28271A28271-noncoding282712827128271A-99190.945748
AY.54N63D63Gnonsyn284602846128462gAcgGc100500.958238
AY.54N203R203Mnonsyn288802888128882aGgaTg104090.992468
AY.54N377D377Ynonsyn294022940329404GatTat101380.966629
AY.54noncoding29742G29742Tnoncoding297422974229742GT94090.897121