CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.52

Use the dropdown lists below to filter the mutations displayed in the table, click the 'Refresh Table' to update.

LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.52 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


Click column headings to re-sort, enter criteria into the 'Search' box to filter data.

LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.52noncoding210G210Tnoncoding210210210GT11140.907166
AY.52noncoding241C241Tnoncoding241241241CT11330.922638
AY.52ORF1ab/nsp2129P129LP309Lnonsyn119011911192cCacTa8370.681596
AY.52ORF1ab/nsp2154G154GG334Gsyn126512661267ggCggT8380.68241
AY.52ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT12080.983713
AY.52ORF1ab/nsp3822P822LP1640Lnonsyn518351845185cCtcTt8200.667752
AY.52ORF1ab/nsp4446A446VA3209Vnonsyn989098919892gCtgTt8220.669381
AY.52ORF1ab/nsp6149V149AV3718Anonsyn114171141811419gTtgCt9200.749186
AY.52ORF1ab/nsp987Y87YY4227Ysyn129441294512946taTtaC8230.670195
AY.52ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt12160.990228
AY.52ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt11690.951954
AY.52ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa10010.815147
AY.52ORF1ab/nsp14A2-B46P46LP5971Lnonsyn181751817618177cCtcTt7630.621336
AY.52ORF1ab/nsp15A1-B214L214LL6666Lsyn202602026120262ttAttG7320.596091
AY.52S19T19Rnonsyn216172161821619aCaaGa9300.757329
AY.52S156E156deldel220282202922030GAG---8180.666124
AY.52S157F157deldel220312203222033TTC---8160.664495
AY.52S158R158Gnonsyn220342203522036AgaGga8220.669381
AY.52S452L452Rnonsyn229162291722918cTgcGg9950.810261
AY.52S478T478Knonsyn229942299522996aCaaAa10010.815147
AY.52S614D614Gnonsyn234022340323404gAtgGt12230.995928
AY.52S681P681Rnonsyn236032360423605cCtcGt12240.996743
AY.52S950D950Nnonsyn244102441124412GatAat11820.962541
AY.52S1141L1141Wnonsyn249832498424985tTgtGg7260.591205
AY.52ORF3a26S26Lnonsyn254682546925470tCatTa12210.9943
AY.52ORF3a99A99Asyn256872568825689gcTgcC7360.599349
AY.52E62V62Fnonsyn264282642926430GttTtt7390.601792
AY.52M82I82Tnonsyn267662676726768aTcaCc12210.9943
AY.52M112F112Fsyn268562685726858ttCttT9020.734528
AY.52ORF7a82V82Anonsyn276372763827639gTtgCt8350.679967
AY.52ORF7a116L116Fnonsyn277392774027741CtcTtc7010.570847
AY.52ORF7a120T120Inonsyn277512775227753aCaaTa8470.689739
AY.52ORF8119D119deldel282482824928250GAT---10460.851792
AY.52ORF8120F120deldel282512825228253TTC---10460.851792
AY.52noncoding28271A28271-noncoding282712827128271A-10680.869707
AY.52N49T49Inonsyn284182841928420aCtaTt6660.542345
AY.52N63D63Gnonsyn284602846128462gAcgGc11900.969055
AY.52N203R203Mnonsyn288802888128882aGgaTg9070.738599
AY.52N377D377Ynonsyn294022940329404GatTat9510.77443
AY.52noncoding29742G29742Tnoncoding297422974229742GT9980.812704