CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.5.4

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.5.4 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.5.4noncoding210G210Tnoncoding210210210GT34960.967349
AY.5.4noncoding241C241Tnoncoding241241241CT34940.966796
AY.5.4ORF1ab/nsp2129P129LP309Lnonsyn119011911192cCacTa26170.724128
AY.5.4ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT35460.981184
AY.5.4ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct35410.979801
AY.5.4ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa34680.959602
AY.5.4ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct34190.946043
AY.5.4ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT35500.982291
AY.5.4ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta34940.966796
AY.5.4ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc35520.982844
AY.5.4ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct35510.982568
AY.5.4ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG35210.974267
AY.5.4ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt35940.994466
AY.5.4ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt35700.987825
AY.5.4ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa35910.993636
AY.5.4ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt35490.982014
AY.5.4S19T19Rnonsyn216172161821619aCaaGa35650.986442
AY.5.4S156E156deldel220282202922030GAG---33050.914499
AY.5.4S157F157deldel220312203222033TTC---30970.856945
AY.5.4S158R158Gnonsyn220342203522036AgaGga30890.854732
AY.5.4S452L452Rnonsyn229162291722918cTgcGg34500.954621
AY.5.4S478T478Knonsyn229942299522996aCaaAa35050.96984
AY.5.4S614D614Gnonsyn234022340323404gAtgGt36090.998616
AY.5.4S681P681Rnonsyn236032360423605cCtcGt36010.996403
AY.5.4S950D950Nnonsyn244102441124412GatAat31110.860819
AY.5.4S1122V1122Vsyn249262492724928gtGgtT29120.805755
AY.5.4ORF3a26S26Lnonsyn254682546925470tCatTa35930.994189
AY.5.4M82I82Tnonsyn267662676726768aTcaCc34900.965689
AY.5.4ORF7a82V82Anonsyn276372763827639gTtgCt33860.936912
AY.5.4ORF7a120T120Inonsyn277512775227753aCaaTa34230.94715
AY.5.4ORF7b40T40Inonsyn278732787427875aCtaTt34980.967903
AY.5.4ORF8119D119deldel282482824928250GAT---29600.819037
AY.5.4ORF8120F120deldel282512825228253TTC---29450.814887
AY.5.4noncoding28271A28271-noncoding282712827128271A-28580.790814
AY.5.4N63D63Gnonsyn284602846128462gAcgGc34950.967072
AY.5.4N203R203Mnonsyn288802888128882aGgaTg35810.990869
AY.5.4N215G215Cnonsyn289162891728918GgtTgt35320.97731
AY.5.4N327S327Lnonsyn292522925329254tCgtTg29210.808246
AY.5.4N377D377Ynonsyn294022940329404GatTat35500.982291
AY.5.4noncoding29742G29742Tnoncoding297422974229742GT33990.940509