CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.5.2

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.5.2 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.5.2noncoding210G210Tnoncoding210210210GT4020.990148
AY.5.2noncoding241C241Tnoncoding241241241CT4020.990148
AY.5.2ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT4061
AY.5.2ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct4030.992611
AY.5.2ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa3960.975369
AY.5.2ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct3970.977833
AY.5.2ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT4020.990148
AY.5.2ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta4020.990148
AY.5.2ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc4061
AY.5.2ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct4050.997537
AY.5.2ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG4020.990148
AY.5.2ORF1ab/nsp893T93IT4035Inonsyn123681236912370aCtaTt3940.970443
AY.5.2ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt4010.987685
AY.5.2ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt4061
AY.5.2ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa4061
AY.5.2ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt4050.997537
AY.5.2S19T19Rnonsyn216172161821619aCaaGa4040.995074
AY.5.2S156E156deldel220282202922030GAG---3740.921182
AY.5.2S157F157deldel220312203222033TTC---3580.881773
AY.5.2S158R158Gnonsyn220342203522036AgaGga3740.921182
AY.5.2S452L452Rnonsyn229162291722918cTgcGg3910.963054
AY.5.2S478T478Knonsyn229942299522996aCaaAa4000.985222
AY.5.2S614D614Gnonsyn234022340323404gAtgGt4061
AY.5.2S681P681Rnonsyn236032360423605cCtcGt4061
AY.5.2S950D950Nnonsyn244102441124412GatAat3970.977833
AY.5.2S1122V1122Vsyn249262492724928gtGgtT4061
AY.5.2ORF3a26S26Lnonsyn254682546925470tCatTa3940.970443
AY.5.2ORF3a60S60Ssyn255702557125572tcCtcT3920.965517
AY.5.2M82I82Tnonsyn267662676726768aTcaCc4061
AY.5.2ORF7a71V71Inonsyn276042760527606GtaAta2750.67734
AY.5.2ORF7a82V82Anonsyn276372763827639gTtgCt3820.940887
AY.5.2ORF7a120T120Inonsyn277512775227753aCaaTa3890.958128
AY.5.2ORF7b40T40Inonsyn278732787427875aCtaTt4000.985222
AY.5.2ORF8119D119deldel282482824928250GAT---4020.990148
AY.5.2ORF8120F120deldel282512825228253TTC---4020.990148
AY.5.2noncoding28271A28271-noncoding282712827128271A-3660.901478
AY.5.2N63D63Gnonsyn284602846128462gAcgGc4030.992611
AY.5.2N203R203Mnonsyn288802888128882aGgaTg4050.997537
AY.5.2N215G215Cnonsyn289162891728918GgtTgt4040.995074
AY.5.2N327S327Lnonsyn292522925329254tCgtTg4050.997537
AY.5.2N377D377Ynonsyn294022940329404GatTat4050.997537
AY.5.2noncoding29742G29742Tnoncoding297422974229742GT3960.975369