CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.49

Use the dropdown lists below to filter the mutations displayed in the table, click the 'Refresh Table' to update.

LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.49 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


Click column headings to re-sort, enter criteria into the 'Search' box to filter data.

LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.49noncoding210G210Tnoncoding210210210GT3010.961661
AY.49noncoding241C241Tnoncoding241241241CT3030.968051
AY.49ORF1ab/nsp2129P129LP309Lnonsyn119011911192cCacTa2590.827476
AY.49ORF1ab/nsp2154G154GG334Gsyn126512661267ggCggT2730.872204
AY.49ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT3110.99361
AY.49ORF1ab/nsp3822P822LP1640Lnonsyn518351845185cCtcTt2710.865815
AY.49ORF1ab/nsp31018Y1018YY1836Ysyn577157725773taTtaC2070.661342
AY.49ORF1ab/nsp4446A446VA3209Vnonsyn989098919892gCtgTt2810.897764
AY.49ORF1ab/nsp5A-B260A260AA3523Asyn108321083310834gcCgcT2060.658147
AY.49ORF1ab/nsp6149V149AV3718Anonsyn114171141811419gTtgCt2760.881789
AY.49ORF1ab/nsp987Y87YY4227Ysyn129441294512946taTtaC2730.872204
AY.49ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt3070.980831
AY.49ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt3110.99361
AY.49ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa3131
AY.49ORF1ab/nsp14A2-B46P46LP5971Lnonsyn181751817618177cCtcTt2400.766773
AY.49ORF1ab/nsp15A1-B214L214LL6666Lsyn202602026120262ttAttG2550.814696
AY.49S19T19Rnonsyn216172161821619aCaaGa3000.958466
AY.49S142G142Dnonsyn219862198721988gGtgAt1810.578275
AY.49S156E156deldel220282202922030GAG---2190.699681
AY.49S157F157deldel220312203222033TTC---2190.699681
AY.49S158R158Gnonsyn220342203522036AgaGga2200.702875
AY.49S452L452Rnonsyn229162291722918cTgcGg2960.945687
AY.49S478T478Knonsyn229942299522996aCaaAa2910.929712
AY.49S493Q493Enonsyn230392304023041CaaGaa2030.648562
AY.49S614D614Gnonsyn234022340323404gAtgGt3080.984026
AY.49S681P681Rnonsyn236032360423605cCtcGt3110.99361
AY.49S854K854Nnonsyn241222412324124aaGaaT2080.664537
AY.49S950D950Nnonsyn244102441124412GatAat2990.955272
AY.49ORF3a26S26Lnonsyn254682546925470tCatTa2860.913738
AY.49ORF3a27D27deldel254712547225473GAT---2140.683706
AY.49ORF3a28F28deldel254742547525476TTT---2160.690096
AY.49ORF3a29V29deldel254772547825479GTT---2130.680511
AY.49ORF3a240P240Snonsyn261102611126112CctTct2080.664537
AY.49M82I82Tnonsyn267662676726768aTcaCc3090.98722
AY.49ORF7a82V82Anonsyn276372763827639gTtgCt2070.661342
AY.49ORF7a116L116Fnonsyn277392774027741CtcTtc2240.715655
AY.49ORF7a120T120Inonsyn277512775227753aCaaTa2490.795527
AY.49ORF829Q29Lnonsyn279782797927980cAacTa2090.667732
AY.49ORF8119D119deldel282482824928250GAT---2350.750799
AY.49ORF8120F120deldel282512825228253TTC---2350.750799
AY.49noncoding28271A28271-noncoding282712827128271A-2150.686901
AY.49N63D63Gnonsyn284602846128462gAcgGc3090.98722
AY.49N203R203Mnonsyn288802888128882aGgaTg3131
AY.49N377D377Ynonsyn294022940329404GatTat2710.865815
AY.49noncoding29742G29742Tnoncoding297422974229742GT2780.888179