CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.48

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.48 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.48noncoding210G210Tnoncoding210210210GT20630.959535
AY.48noncoding241C241Tnoncoding241241241CT20810.967907
AY.48ORF1ab/nsp2129P129LP309Lnonsyn119011911192cCacTa19280.896744
AY.48ORF1ab/nsp2154G154GG334Gsyn126512661267ggCggT19460.905116
AY.48ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT21340.992558
AY.48ORF1ab/nsp3822P822LP1640Lnonsyn518351845185cCtcTt20250.94186
AY.48ORF1ab/nsp4217D217ND2980Nnonsyn920392049205GatAat17600.818605
AY.48ORF1ab/nsp4375F375SF3138Snonsyn967796789679tTctCc17500.813953
AY.48ORF1ab/nsp5A-B115L115LL3378Lsyn103971039810399ttAttG14720.684651
AY.48ORF1ab/nsp5A-B272L272LL3535Lsyn108681086910870CtgTtg14640.68093
AY.48ORF1ab/nsp611H11QH3580Qnonsyn110031100411005caCcaA17050.793023
AY.48ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt21460.99814
AY.48ORF1ab/nsp13420E420EE5744Esyn174941749517496gaAgaG17540.815814
AY.48ORF1ab/nsp15A1-B259K259RK6711Rnonsyn203952039620397aAgaGg16860.784186
AY.48S19T19Rnonsyn216172161821619aCaaGa21070.98
AY.48S77K77Tnonsyn217912179221793aAgaCg14680.682791
AY.48S142G142Dnonsyn219862198721988gGtgAt12760.593488
AY.48S156E156deldel220282202922030GAG---18670.868372
AY.48S157F157deldel220312203222033TTC---18670.868372
AY.48S158R158Gnonsyn220342203522036AgaGga18720.870698
AY.48S452L452Rnonsyn229162291722918cTgcGg20300.944186
AY.48S478T478Knonsyn229942299522996aCaaAa20430.950233
AY.48S614D614Gnonsyn234022340323404gAtgGt21490.999535
AY.48S681P681Rnonsyn236032360423605cCtcGt21470.998605
AY.48S950D950Nnonsyn244102441124412GatAat20860.970233
AY.48ORF3a26S26Lnonsyn254682546925470tCatTa21450.997674
AY.48M82I82Tnonsyn267662676726768aTcaCc21470.998605
AY.48ORF7a82V82Anonsyn276372763827639gTtgCt17440.811163
AY.48ORF7a120T120Inonsyn277512775227753aCaaTa18450.85814
AY.48ORF819E19Xnonsyn279482794927950GaaTaa16170.752093
AY.48ORF8120F120Fsyn282512825228253ttCttT17340.806512
AY.48noncoding28271A28271-noncoding282712827128271A-20540.955349
AY.48N63D63Gnonsyn284602846128462gAcgGc21150.983721
AY.48N203R203Mnonsyn288802888128882aGgaTg21360.993488
AY.48N377D377Ynonsyn294022940329404GatTat19890.925116
AY.48noncoding29742G29742Tnoncoding297422974229742GT19140.890233