CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.46.1

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.46.1 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.46.1noncoding210G210Tnoncoding210210210GT9160.940452
AY.46.1noncoding241C241Tnoncoding241241241CT9150.939425
AY.46.1ORF1ab/nsp2278K278NK458Nnonsyn163716381639aaAaaC6610.678645
AY.46.1ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT9690.994867
AY.46.1ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct9530.978439
AY.46.1ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa9530.978439
AY.46.1ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct9330.957906
AY.46.1ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT9580.983573
AY.46.1ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta8420.864476
AY.46.1ORF1ab/nsp4417L417LL3180Lsyn980398049805CtgTtg6420.659138
AY.46.1ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc9460.971253
AY.46.1ORF1ab/nsp62A2VA3571Vnonsyn109761097710978gCagTa6840.702259
AY.46.1ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct9590.9846
AY.46.1ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG9500.975359
AY.46.1ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt9670.992813
AY.46.1ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt9720.997947
AY.46.1ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa9650.99076
AY.46.1ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt9450.970226
AY.46.1S19T19Rnonsyn216172161821619aCaaGa9480.973306
AY.46.1S142G142Dnonsyn219862198721988gGtgAt6410.658111
AY.46.1S156E156deldel220282202922030GAG---9430.968172
AY.46.1S157F157deldel220312203222033TTC---9430.968172
AY.46.1S158R158Gnonsyn220342203522036AgaGga9400.965092
AY.46.1S452L452Rnonsyn229162291722918cTgcGg9500.975359
AY.46.1S478T478Knonsyn229942299522996aCaaAa9530.978439
AY.46.1S614D614Gnonsyn234022340323404gAtgGt9610.986653
AY.46.1S681P681Rnonsyn236032360423605cCtcGt9710.99692
AY.46.1S950D950Nnonsyn244102441124412GatAat9550.980493
AY.46.1ORF3a26S26Lnonsyn254682546925470tCatTa9710.99692
AY.46.1ORF3a94L94Pnonsyn256722567325674cTtcCt6820.700205
AY.46.1M82I82Tnonsyn267662676726768aTcaCc8400.862423
AY.46.1ORF7a82V82Anonsyn276372763827639gTtgCt7880.809035
AY.46.1ORF7a120T120Inonsyn277512775227753aCaaTa8910.914784
AY.46.1ORF7b40T40Inonsyn278732787427875aCtaTt9620.98768
AY.46.1ORF8119D119deldel282482824928250GAT---9670.992813
AY.46.1ORF8120F120deldel282512825228253TTC---9650.99076
AY.46.1noncoding28271A28271-noncoding282712827128271A-9560.98152
AY.46.1N63D63Gnonsyn284602846128462gAcgGc9650.99076
AY.46.1N203R203Mnonsyn288802888128882aGgaTg9710.99692
AY.46.1N215G215Cnonsyn289162891728918GgtTgt9650.99076
AY.46.1N377D377Ynonsyn294022940329404GatTat9590.9846
AY.46.1noncoding29742G29742Tnoncoding297422974229742GT9120.936345