CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.42

Use the dropdown lists below to filter the mutations displayed in the table, click the 'Refresh Table' to update.

LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.42 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


Click column headings to re-sort, enter criteria into the 'Search' box to filter data.

LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.42noncoding210G210Tnoncoding210210210GT239030.96162
AY.42noncoding241C241Tnoncoding241241241CT239680.964235
AY.42ORF1ab/nsp2485V485IV665Inonsyn225822592260GtcAtc195460.786338
AY.42ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT247570.995977
AY.42ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct247190.994448
AY.42ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa245610.988092
AY.42ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct238070.957758
AY.42ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT247540.995856
AY.42ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta245330.986965
AY.42ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc246240.990626
AY.42ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct247470.995575
AY.42ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG247140.994247
AY.42ORF1ab/nsp777D77DD3936Dsyn120711207212073gaCgaT220400.886672
AY.42ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt247450.995494
AY.42ORF1ab/nsp12599H599HH4991Hsyn152351523615237caCcaT209550.843022
AY.42ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt244630.984149
AY.42ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa247660.996339
AY.42ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt246220.990546
AY.42S19T19Rnonsyn216172161821619aCaaGa235600.947822
AY.42S95T95Inonsyn218452184621847aCtaTt181530.730297
AY.42S156E156deldel220282202922030GAG---217510.875045
AY.42S157F157deldel220312203222033TTC---217030.873114
AY.42S158R158Gnonsyn220342203522036AgaGga216910.872631
AY.42S452L452Rnonsyn229162291722918cTgcGg239620.963994
AY.42S478T478Knonsyn229942299522996aCaaAa240860.968983
AY.42S614D614Gnonsyn234022340323404gAtgGt248110.998149
AY.42S681P681Rnonsyn236032360423605cCtcGt247640.996259
AY.42S950D950Nnonsyn244102441124412GatAat233170.938046
AY.42ORF3a26S26Lnonsyn254682546925470tCatTa247620.996178
AY.42ORF3a160Y160Ysyn258702587125872taCtaT202820.815947
AY.42M82I82Tnonsyn267662676726768aTcaCc247940.997466
AY.42ORF7a82V82Anonsyn276372763827639gTtgCt230120.925775
AY.42ORF7a120T120Inonsyn277512775227753aCaaTa233720.940258
AY.42ORF7b40T40Inonsyn278732787427875aCtaTt245550.987851
AY.42ORF8119D119deldel282482824928250GAT---240870.969023
AY.42ORF8120F120deldel282512825228253TTC---240760.96858
AY.42noncoding28271A28271-noncoding282712827128271A-231390.930885
AY.42N63D63Gnonsyn284602846128462gAcgGc234970.945287
AY.42N203R203Mnonsyn288802888128882aGgaTg245580.987971
AY.42N215G215Cnonsyn289162891728918GgtTgt244230.98254
AY.42N377D377Ynonsyn294022940329404GatTat242060.97381
AY.42noncoding29742G29742Tnoncoding297422974229742GT228170.917931