CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.41

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.41 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.41noncoding210G210Tnoncoding210210210GT33170.975015
AY.41noncoding241C241Tnoncoding241241241CT33290.978542
AY.41ORF1ab/nsp2339G339SG519Snonsyn182018211822GgtAgt27570.810406
AY.41ORF1ab/nsp2489K489NK669Nnonsyn227022712272aaGaaT27490.808054
AY.41ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT33850.995003
AY.41ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct33670.989712
AY.41ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa33720.991182
AY.41ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct33080.972369
AY.41ORF1ab/nsp31739A1739AA2557Asyn793479357936gcGgcT27970.822163
AY.41ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT33770.992651
AY.41ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta32670.960317
AY.41ORF1ab/nsp4222R222RR2985Rsyn921892199220agGagA25150.739271
AY.41ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc33720.991182
AY.41ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct33770.992651
AY.41ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG33780.992945
AY.41ORF1ab/nsp1291K91RK4483Rnonsyn137111371213713aAgaGg27810.81746
AY.41ORF1ab/nsp12227P227SP4619Snonsyn141191412014121CcaTca30190.887419
AY.41ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt33650.989124
AY.41ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt33950.997942
AY.41ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa33940.997648
AY.41ORF1ab/nsp13334I334VI5658Vnonsyn172361723717238AtaGta28080.825397
AY.41ORF1ab/nsp14A2-B119A119VA6044Vnonsyn183941839518396gCtgTt28060.824809
AY.41ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt33680.990006
AY.41S19T19Rnonsyn216172161821619aCaaGa33620.988242
AY.41S156E156deldel220282202922030GAG---31160.915932
AY.41S157F157deldel220312203222033TTC---30870.907407
AY.41S158R158Gnonsyn220342203522036AgaGga30850.90682
AY.41S262A262Snonsyn223462234722348GctTct26410.776308
AY.41S452L452Rnonsyn229162291722918cTgcGg33600.987654
AY.41S477S477Inonsyn229912299222993aGcaTc27290.802175
AY.41S478T478Knonsyn229942299522996aCaaAa33620.988242
AY.41S614D614Gnonsyn234022340323404gAtgGt34010.999706
AY.41S681P681Rnonsyn236032360423605cCtcGt33540.985891
AY.41S950D950Nnonsyn244102441124412GatAat31160.915932
AY.41S1167G1167Vnonsyn250612506225063gGtgTt29360.863022
AY.41ORF3a26S26Lnonsyn254682546925470tCatTa33920.997061
AY.41M82I82Tnonsyn267662676726768aTcaCc33970.99853
AY.41ORF7a82V82Anonsyn276372763827639gTtgCt32910.967372
AY.41ORF7a120T120Inonsyn277512775227753aCaaTa33130.973839
AY.41ORF7b40T40Inonsyn278732787427875aCtaTt33520.985303
AY.41ORF8119D119deldel282482824928250GAT---32610.958554
AY.41ORF8120F120deldel282512825228253TTC---32600.95826
AY.41noncoding28271A28271-noncoding282712827128271A-28400.834803
AY.41N63D63Gnonsyn284602846128462gAcgGc29840.877131
AY.41N203R203Mnonsyn288802888128882aGgaTg33600.987654
AY.41N215G215Cnonsyn289162891728918GgtTgt33270.977954
AY.41N377D377Ynonsyn294022940329404GatTat33650.989124
AY.41noncoding29742G29742Tnoncoding297422974229742GT31500.925926