CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.4.2.1

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.4.2.1 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.4.2.1noncoding210G210Tnoncoding210210210GT64500.960965
AY.4.2.1noncoding241C241Tnoncoding241241241CT65290.972735
AY.4.2.1ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT67070.999255
AY.4.2.1ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct66600.992253
AY.4.2.1ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa64900.966925
AY.4.2.1ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct65380.974076
AY.4.2.1ORF1ab/nsp31711A1711VA2529Vnonsyn785078517852gCtgTt65240.97199
AY.4.2.1ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT66720.994041
AY.4.2.1ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta66740.994338
AY.4.2.1ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc66720.994041
AY.4.2.1ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct66680.993445
AY.4.2.1ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG66610.992402
AY.4.2.1ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt67030.998659
AY.4.2.1ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt64060.95441
AY.4.2.1ORF1ab/nsp12760D760DD5152Dsyn157181571915720gaCgaT57580.857867
AY.4.2.1ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa67080.999404
AY.4.2.1ORF1ab/nsp13268N268NN5592Nsyn170381703917040aaTaaC65650.978099
AY.4.2.1ORF1ab/nsp14A2-B216C216CC6141Csyn186851868618687tgCtgT57540.857271
AY.4.2.1ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt66730.99419
AY.4.2.1S19T19Rnonsyn216172161821619aCaaGa67010.998361
AY.4.2.1S36V36Fnonsyn216682166921670GttTtt66130.98525
AY.4.2.1S95T95Inonsyn218452184621847aCtaTt49320.734803
AY.4.2.1S142G142Dnonsyn219862198721988gGtgAt46280.689511
AY.4.2.1S145Y145Hnonsyn219952199621997TacCac56100.835816
AY.4.2.1S156E156deldel220282202922030GAG---64550.96171
AY.4.2.1S157F157deldel220312203222033TTC---64530.961412
AY.4.2.1S158R158Gnonsyn220342203522036AgaGga64440.960072
AY.4.2.1S222A222Vnonsyn222262222722228gCtgTt57130.851162
AY.4.2.1S452L452Rnonsyn229162291722918cTgcGg66220.986591
AY.4.2.1S478T478Knonsyn229942299522996aCaaAa66240.986889
AY.4.2.1S614D614Gnonsyn234022340323404gAtgGt67121
AY.4.2.1S681P681Rnonsyn236032360423605cCtcGt66950.997467
AY.4.2.1S950D950Nnonsyn244102441124412GatAat66800.995232
AY.4.2.1ORF3a26S26Lnonsyn254682546925470tCatTa67080.999404
AY.4.2.1ORF3a74S74Ssyn256122561325614tcCtcT57450.85593
AY.4.2.1M82I82Tnonsyn267662676726768aTcaCc66890.996573
AY.4.2.1ORF7a82V82Anonsyn276372763827639gTtgCt60670.903903
AY.4.2.1ORF7a120T120Inonsyn277512775227753aCaaTa65330.973331
AY.4.2.1ORF7b40T40Inonsyn278732787427875aCtaTt66260.987187
AY.4.2.1ORF8119D119deldel282482824928250GAT---66390.989124
AY.4.2.1ORF8120F120deldel282512825228253TTC---66370.988826
AY.4.2.1noncoding28271A28271-noncoding282712827128271A-65490.975715
AY.4.2.1N63D63Gnonsyn284602846128462gAcgGc66960.997616
AY.4.2.1N202S202Inonsyn288772887828879aGtaTt57990.863975
AY.4.2.1N203R203Mnonsyn288802888128882aGgaTg66400.989273
AY.4.2.1N215G215Cnonsyn289162891728918GgtTgt66210.986442
AY.4.2.1N377D377Ynonsyn294022940329404GatTat66820.99553
AY.4.2.1noncoding29742G29742Tnoncoding297422974229742GT65120.970203