CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.4.2

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.4.2 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.4.2noncoding210G210Tnoncoding210210210GT444140.963281
AY.4.2noncoding241C241Tnoncoding241241241CT449130.974104
AY.4.2ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT460880.999588
AY.4.2ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct460840.999501
AY.4.2ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa447160.969831
AY.4.2ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct456450.98998
AY.4.2ORF1ab/nsp31711A1711VA2529Vnonsyn785078517852gCtgTt461071
AY.4.2ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT460910.999653
AY.4.2ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta460540.99885
AY.4.2ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc460860.999545
AY.4.2ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct460660.999111
AY.4.2ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG459550.996703
AY.4.2ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt460200.998113
AY.4.2ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt441440.957425
AY.4.2ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa460880.999588
AY.4.2ORF1ab/nsp13268N268NN5592Nsyn170381703917040aaTaaC460960.999761
AY.4.2ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt460940.999718
AY.4.2S19T19Rnonsyn216172161821619aCaaGa460580.998937
AY.4.2S95T95Inonsyn218452184621847aCtaTt420070.911076
AY.4.2S142G142Dnonsyn219862198721988gGtgAt392950.852257
AY.4.2S145Y145Hnonsyn219952199621997TacCac456540.990175
AY.4.2S156E156deldel220282202922030GAG---453170.982866
AY.4.2S157F157deldel220312203222033TTC---453080.982671
AY.4.2S158R158Gnonsyn220342203522036AgaGga453050.982606
AY.4.2S222A222Vnonsyn222262222722228gCtgTt460480.99872
AY.4.2S452L452Rnonsyn229162291722918cTgcGg456920.990999
AY.4.2S478T478Knonsyn229942299522996aCaaAa456970.991108
AY.4.2S614D614Gnonsyn234022340323404gAtgGt460980.999805
AY.4.2S681P681Rnonsyn236032360423605cCtcGt460790.999393
AY.4.2S950D950Nnonsyn244102441124412GatAat458450.994318
AY.4.2ORF3a26S26Lnonsyn254682546925470tCatTa460670.999132
AY.4.2ORF3a74S74Ssyn256122561325614tcCtcT458070.993493
AY.4.2M82I82Tnonsyn267662676726768aTcaCc459770.99718
AY.4.2ORF7a82V82Anonsyn276372763827639gTtgCt451970.980263
AY.4.2ORF7a120T120Inonsyn277512775227753aCaaTa457870.99306
AY.4.2ORF7b40T40Inonsyn278732787427875aCtaTt459000.99551
AY.4.2ORF8119D119deldel282482824928250GAT---457720.992734
AY.4.2ORF8120F120deldel282512825228253TTC---457630.992539
AY.4.2noncoding28271A28271-noncoding282712827128271A-453940.984536
AY.4.2N63D63Gnonsyn284602846128462gAcgGc459700.997029
AY.4.2N203R203Mnonsyn288802888128882aGgaTg460210.998135
AY.4.2N215G215Cnonsyn289162891728918GgtTgt459470.99653
AY.4.2N377D377Ynonsyn294022940329404GatTat460080.997853
AY.4.2noncoding29742G29742Tnoncoding297422974229742GT444340.963715