CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.4.1

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.4.1 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.4.1noncoding210G210Tnoncoding210210210GT12570.926991
AY.4.1noncoding241C241Tnoncoding241241241CT12880.949853
AY.4.1ORF1ab/nsp2634T634IT814Inonsyn270527062707aCaaTa13520.99705
AY.4.1ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT13561
AY.4.1ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct13430.990413
AY.4.1ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa13490.994838
AY.4.1ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct13380.986726
AY.4.1ORF1ab/nsp31711A1711VA2529Vnonsyn785078517852gCtgTt13561
AY.4.1ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT13550.999263
AY.4.1ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta13530.997788
AY.4.1ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc13561
AY.4.1ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct13561
AY.4.1ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG13561
AY.4.1ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt13520.99705
AY.4.1ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt13430.990413
AY.4.1ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa13561
AY.4.1ORF1ab/nsp13268N268NN5592Nsyn170381703917040aaTaaC13540.998525
AY.4.1ORF1ab/nsp14A2-B296Y296YY6221Ysyn189251892618927taTtaC13540.998525
AY.4.1ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt13561
AY.4.1ORF1ab/nsp15A1-B252I252LI6704Lnonsyn203742037520376AttCtt13540.998525
AY.4.1S19T19Rnonsyn216172161821619aCaaGa13520.99705
AY.4.1S95T95Inonsyn218452184621847aCtaTt11060.815634
AY.4.1S142G142Dnonsyn219862198721988gGtgAt9910.730826
AY.4.1S156E156deldel220282202922030GAG---12760.941003
AY.4.1S157F157deldel220312203222033TTC---12770.94174
AY.4.1S158R158Gnonsyn220342203522036AgaGga12760.941003
AY.4.1S446G446Vnonsyn228982289922900gGtgTt13340.983776
AY.4.1S452L452Rnonsyn229162291722918cTgcGg13360.985251
AY.4.1S478T478Knonsyn229942299522996aCaaAa13340.983776
AY.4.1S614D614Gnonsyn234022340323404gAtgGt13561
AY.4.1S681P681Rnonsyn236032360423605cCtcGt13530.997788
AY.4.1S950D950Nnonsyn244102441124412GatAat13530.997788
AY.4.1ORF3a26S26Lnonsyn254682546925470tCatTa13530.997788
AY.4.1M82I82Tnonsyn267662676726768aTcaCc13561
AY.4.1ORF7a82V82Anonsyn276372763827639gTtgCt13440.99115
AY.4.1ORF7a120T120Inonsyn277512775227753aCaaTa13450.991888
AY.4.1ORF7b40T40Inonsyn278732787427875aCtaTt13550.999263
AY.4.1ORF8119D119deldel282482824928250GAT---13470.993363
AY.4.1ORF8120F120deldel282512825228253TTC---13460.992625
AY.4.1noncoding28271A28271-noncoding282712827128271A-12230.901917
AY.4.1N63D63Gnonsyn284602846128462gAcgGc13500.995575
AY.4.1N203R203Mnonsyn288802888128882aGgaTg13520.99705
AY.4.1N215G215Cnonsyn289162891728918GgtTgt13460.992625
AY.4.1N377D377Ynonsyn294022940329404GatTat13561
AY.4.1noncoding29742G29742Tnoncoding297422974229742GT12760.941003