CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.39.1

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.39.1 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.39.1ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT248240.983362
AY.39.1ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct250150.990929
AY.39.1ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa245990.974449
AY.39.1ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct247730.981342
AY.39.1ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT250880.99382
AY.39.1ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta251120.994771
AY.39.1ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc249800.989542
AY.39.1ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct251700.997069
AY.39.1ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG251230.995207
AY.39.1ORF1ab/nsp1214V14VV4406Vsyn134801348113482gtAgtG251080.994613
AY.39.1ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt252050.998455
AY.39.1ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt251540.996435
AY.39.1ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa252140.998812
AY.39.1ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt251330.995603
AY.39.1ORF1ab/nsp16238Q238HQ7036Hnonsyn213702137121372caGcaT246910.978094
AY.39.1S19T19Rnonsyn216172161821619aCaaGa247600.980827
AY.39.1S95T95Inonsyn218452184621847aCtaTt139310.551854
AY.39.1S156E156deldel220282202922030GAG---226620.897718
AY.39.1S157F157deldel220312203222033TTC---226720.898114
AY.39.1S158R158Gnonsyn220342203522036AgaGga226430.896966
AY.39.1S452L452Rnonsyn229162291722918cTgcGg245390.972073
AY.39.1S478T478Knonsyn229942299522996aCaaAa244460.968389
AY.39.1S614D614Gnonsyn234022340323404gAtgGt251340.995643
AY.39.1S681P681Rnonsyn236032360423605cCtcGt251440.996039
AY.39.1S950D950Nnonsyn244102441124412GatAat249800.989542
AY.39.1ORF3a26S26Lnonsyn254682546925470tCatTa248050.98261
AY.39.1M82I82Tnonsyn267662676726768aTcaCc252050.998455
AY.39.1ORF7a71V71Inonsyn276042760527606GtaAta242100.95904
AY.39.1ORF7a72K72deldel276072760827609AAA---165100.654017
AY.39.1ORF7a73H73deldel276102761127612CAC---165180.654334
AY.39.1ORF7a74V74deldel276132761427615GTC---165170.654294
AY.39.1ORF7a75Y75deldel276162761727618TAT---165100.654017
AY.39.1ORF7a76Q76deldel276192762027621CAG---165020.6537
AY.39.1ORF7a77L77del2del276222762327624TTa--a164660.652274
AY.39.1ORF7a82V82Anonsyn276372763827639gTtgCt245270.971597
AY.39.1ORF7a120T120Inonsyn277512775227753aCaaTa246830.977777
AY.39.1ORF7b40T40Inonsyn278732787427875aCtaTt251120.994771
AY.39.1ORF8119D119deldel282482824928250GAT---250650.992909
AY.39.1ORF8120F120deldel282512825228253TTC---250590.992672
AY.39.1noncoding28271A28271-noncoding282712827128271A-232600.921407
AY.39.1N63D63Gnonsyn284602846128462gAcgGc250210.991166
AY.39.1N203R203Mnonsyn288802888128882aGgaTg250350.991721
AY.39.1N215G215Cnonsyn289162891728918GgtTgt248380.983917
AY.39.1N377D377Ynonsyn294022940329404GatTat250200.991127