CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.39

Use the dropdown lists below to filter the mutations displayed in the table, click the 'Refresh Table' to update.

LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.39 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


Click column headings to re-sort, enter criteria into the 'Search' box to filter data.

LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.39noncoding210G210Tnoncoding210210210GT380820.941063
AY.39noncoding241C241Tnoncoding241241241CT381050.941631
AY.39ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT399030.986063
AY.39ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct399290.986705
AY.39ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa396900.980799
AY.39ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct358900.886895
AY.39ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT398780.985445
AY.39ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta395720.977883
AY.39ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc398210.984036
AY.39ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct399130.98631
AY.39ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG399690.987694
AY.39ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt402020.993451
AY.39ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt403030.995947
AY.39ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa400860.990585
AY.39ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt398830.985568
AY.39ORF1ab/nsp16238Q238HQ7036Hnonsyn213702137121372caGcaT253300.625942
AY.39S19T19Rnonsyn216172161821619aCaaGa377160.932019
AY.39S95T95Inonsyn218452184621847aCtaTt235210.581239
AY.39S156E156deldel220282202922030GAG---337120.833074
AY.39S157F157deldel220312203222033TTC---337160.833173
AY.39S158R158Gnonsyn220342203522036AgaGga336590.831764
AY.39S452L452Rnonsyn229162291722918cTgcGg367370.907826
AY.39S478T478Knonsyn229942299522996aCaaAa368960.911755
AY.39S614D614Gnonsyn234022340323404gAtgGt403440.99696
AY.39S681P681Rnonsyn236032360423605cCtcGt401980.993353
AY.39S950D950Nnonsyn244102441124412GatAat389790.963229
AY.39ORF3a26S26Lnonsyn254682546925470tCatTa402720.995181
AY.39M82I82Tnonsyn267662676726768aTcaCc403140.996219
AY.39ORF7a71V71Inonsyn276042760527606GtaAta232110.573578
AY.39ORF7a82V82Anonsyn276372763827639gTtgCt252330.623545
AY.39ORF7a120T120Inonsyn277512775227753aCaaTa290480.717819
AY.39ORF7b40T40Inonsyn278732787427875aCtaTt392410.969704
AY.39ORF8119D119deldel282482824928250GAT---395490.977315
AY.39ORF8120F120deldel282512825228253TTC---395370.977018
AY.39noncoding28271A28271-noncoding282712827128271A-392800.970667
AY.39N63D63Gnonsyn284602846128462gAcgGc394570.975041
AY.39N203R203Mnonsyn288802888128882aGgaTg402120.993699
AY.39N215G215Cnonsyn289162891728918GgtTgt395740.977933
AY.39N377D377Ynonsyn294022940329404GatTat371740.918625
AY.39noncoding29742G29742Tnoncoding297422974229742GT352870.871994