CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.31

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.31 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.31noncoding210G210Tnoncoding210210210GT541
AY.31noncoding241C241Tnoncoding241241241CT541
AY.31ORF1ab/nsp2129P129LP309Lnonsyn119011911192cCacTa500.925926
AY.31ORF1ab/nsp2154G154GG334Gsyn126512661267ggCggT530.981481
AY.31ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT541
AY.31ORF1ab/nsp3196M196TM1014Tnonsyn330533063307aTgaCg420.777778
AY.31ORF1ab/nsp3460F460FF1278Fsyn409740984099ttCttT290.537037
AY.31ORF1ab/nsp3736D736DD1554Dsyn492549264927gaCgaT290.537037
AY.31ORF1ab/nsp3822P822LP1640Lnonsyn518351845185cCtcTt530.981481
AY.31ORF1ab/nsp31274H1274YH2092Ynonsyn653965406541CacTac480.888889
AY.31ORF1ab/nsp4446A446VA3209Vnonsyn989098919892gCtgTt530.981481
AY.31ORF1ab/nsp6149V149AV3718Anonsyn114171141811419gTtgCt530.981481
AY.31ORF1ab/nsp987Y87YY4227Ysyn129441294512946taTtaC530.981481
AY.31ORF1ab/nsp12274D274DD4666Dsyn142601426114262gaCgaT430.796296
AY.31ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt541
AY.31ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt541
AY.31ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa541
AY.31ORF1ab/nsp13166S166LS5490Lnonsyn167321673316734tCatTa290.537037
AY.31ORF1ab/nsp13365E365DE5689Dnonsyn173291733017331gaGgaT541
AY.31ORF1ab/nsp15A1-B214L214LL6666Lsyn202602026120262ttAttG520.962963
AY.31ORF1ab/nsp15A1-B234H234YH6686Ynonsyn203202032120322CatTat530.981481
AY.31S19T19Rnonsyn216172161821619aCaaGa541
AY.31S142G142Dnonsyn219862198721988gGtgAt320.592593
AY.31S156E156deldel220282202922030GAG---460.851852
AY.31S157F157deldel220312203222033TTC---460.851852
AY.31S158R158Gnonsyn220342203522036AgaGga460.851852
AY.31S452L452Rnonsyn229162291722918cTgcGg530.981481
AY.31S478T478Knonsyn229942299522996aCaaAa530.981481
AY.31S614D614Gnonsyn234022340323404gAtgGt541
AY.31S640S640Pnonsyn234802348123482TctCct420.777778
AY.31S681P681Rnonsyn236032360423605cCtcGt541
AY.31S950D950Nnonsyn244102441124412GatAat490.907407
AY.31S1061V1061Vsyn247432474424745gtCgtT470.87037
AY.31S1104V1104Lnonsyn248722487324874GtaTta420.777778
AY.31ORF3a26S26Lnonsyn254682546925470tCatTa541
AY.31ORF3a166S166Lnonsyn258882588925890tCatTa290.537037
AY.31ORF3a169I169Isyn258972589825899atTatC290.537037
AY.31M82I82Tnonsyn267662676726768aTcaCc541
AY.31ORF7a82V82Anonsyn276372763827639gTtgCt520.962963
AY.31ORF7a116L116Fnonsyn277392774027741CtcTtc520.962963
AY.31ORF7a120T120Inonsyn277512775227753aCaaTa530.981481
AY.31ORF8119D119deldel282482824928250GAT---520.962963
AY.31ORF8120F120deldel282512825228253TTC---520.962963
AY.31noncoding28271A28271-noncoding282712827128271A-520.962963
AY.31N63D63Gnonsyn284602846128462gAcgGc530.981481
AY.31N203R203Mnonsyn288802888128882aGgaTg541
AY.31N362T362Inonsyn293572935829359aCaaTa400.740741
AY.31N377D377Ynonsyn294022940329404GatTat541
AY.31N385R385Knonsyn294262942729428aGaaAa530.981481
AY.31noncoding29742G29742Tnoncoding297422974229742GT510.944444