CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.3

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LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.3 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.3noncoding210G210Tnoncoding210210210GT982190.976924
AY.3noncoding241C241Tnoncoding241241241CT982450.977183
AY.3ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT996370.991028
AY.3ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct1002480.997106
AY.3ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa994590.989258
AY.3ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct962450.95729
AY.3ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT1002290.996917
AY.3ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta1000630.995266
AY.3ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc1000040.994679
AY.3ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct1002410.997036
AY.3ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG1001980.996608
AY.3ORF1ab/nsp6162I162VI3731Vnonsyn114561145711458AttGtt1003560.99818
AY.3ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt1000360.994997
AY.3ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt1002630.997255
AY.3ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa1002220.996847
AY.3ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt1002080.996708
AY.3S19T19Rnonsyn216172161821619aCaaGa991580.986264
AY.3S142G142Dnonsyn219862198721988gGtgAt566050.563015
AY.3S156E156deldel220282202922030GAG---925180.92022
AY.3S157F157deldel220312203222033TTC---925080.920121
AY.3S158R158Gnonsyn220342203522036AgaGga926340.921374
AY.3S452L452Rnonsyn229162291722918cTgcGg973560.968341
AY.3S478T478Knonsyn229942299522996aCaaAa976580.971344
AY.3S574D574Dsyn232822328323284gaTgaC597350.594148
AY.3S614D614Gnonsyn234022340323404gAtgGt1004450.999065
AY.3S681P681Rnonsyn236032360423605cCtcGt1002530.997155
AY.3S950D950Nnonsyn244102441124412GatAat983040.97777
AY.3S1259D1259Dsyn253372533825339gaCgaT597780.594575
AY.3ORF3a26S26Lnonsyn254682546925470tCatTa1003680.998299
AY.3M82I82Tnonsyn267662676726768aTcaCc1004770.999383
AY.3ORF7a82V82Anonsyn276372763827639gTtgCt946020.940948
AY.3ORF7a120T120Inonsyn277512775227753aCaaTa955410.950288
AY.3ORF7b40T40Inonsyn278732787427875aCtaTt998800.993445
AY.3ORF8119D119deldel282482824928250GAT---982000.976735
AY.3ORF8120F120deldel282512825228253TTC---982890.977621
AY.3noncoding28271A28271-noncoding282712827128271A-981990.976725
AY.3N63D63Gnonsyn284602846128462gAcgGc996810.991466
AY.3N203R203Mnonsyn288802888128882aGgaTg952580.947473
AY.3N215G215Cnonsyn289162891728918GgtTgt949260.944171
AY.3N259R259Rsyn290482904929050cgGcgA1001970.996598
AY.3N377D377Ynonsyn294022940329404GatTat983410.978138
AY.3N412S412Ssyn295072950829509agCagT978020.972777
AY.3noncoding29742G29742Tnoncoding297422974229742GT625210.621858