CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.116

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.116 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.116noncoding210G210Tnoncoding210210210GT33380.95727
AY.116noncoding241C241Tnoncoding241241241CT33420.958417
AY.116ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT34620.992831
AY.116ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct33560.962432
AY.116ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa33420.958417
AY.116ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct32920.944078
AY.116ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT34440.987668
AY.116ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta25030.717809
AY.116ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc34230.981646
AY.116ORF1ab/nsp5A-B213I213VI3476Vnonsyn106911069210693AtaGta22360.641239
AY.116ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct33810.969601
AY.116ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG33370.956983
AY.116ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt34400.986521
AY.116ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt34260.982506
AY.116ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa34440.987668
AY.116ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt34440.987668
AY.116S19T19Rnonsyn216172161821619aCaaGa34360.985374
AY.116S95T95Inonsyn218452184621847aCtaTt19900.570691
AY.116S156E156deldel220282202922030GAG---27000.774305
AY.116S157F157deldel220312203222033TTC---27000.774305
AY.116S158R158Gnonsyn220342203522036AgaGga27010.774591
AY.116S452L452Rnonsyn229162291722918cTgcGg34020.975624
AY.116S478T478Knonsyn229942299522996aCaaAa34180.980212
AY.116S614D614Gnonsyn234022340323404gAtgGt34080.977344
AY.116S681P681Rnonsyn236032360423605cCtcGt34540.990536
AY.116S950D950Nnonsyn244102441124412GatAat32680.937195
AY.116ORF3a26S26Lnonsyn254682546925470tCatTa34610.992544
AY.116M82I82Tnonsyn267662676726768aTcaCc34800.997993
AY.116ORF7a82V82Anonsyn276372763827639gTtgCt32330.927158
AY.116ORF7a120T120Inonsyn277512775227753aCaaTa33270.954115
AY.116ORF7b40T40Inonsyn278732787427875aCtaTt34090.977631
AY.116ORF8119D119deldel282482824928250GAT---31870.913966
AY.116ORF8120F120deldel282512825228253TTC---31840.913106
AY.116noncoding28271A28271-noncoding282712827128271A-22200.63665
AY.116N63D63Gnonsyn284602846128462gAcgGc34180.980212
AY.116N203R203Mnonsyn288802888128882aGgaTg34430.987382
AY.116N215G215Cnonsyn289162891728918GgtTgt33530.961572
AY.116N377D377Ynonsyn294022940329404GatTat33760.968167
AY.116noncoding29742G29742Tnoncoding297422974229742GT32730.938629