CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AY.109

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Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AY.109 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AY.109noncoding210G210Tnoncoding210210210GT12670.93713
AY.109noncoding241C241Tnoncoding241241241CT12820.948225
AY.109ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT13310.984467
AY.109ORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct13330.985947
AY.109ORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa13060.965976
AY.109ORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct12900.954142
AY.109ORF1ab/nsp4144D144DD2907Dsyn898489858986gaCgaT13330.985947
AY.109ORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta13280.982249
AY.109ORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc13400.991124
AY.109ORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct13420.992604
AY.109ORF1ab/nsp6120V120VV3689Vsyn113301133111332gtAgtG13290.982988
AY.109ORF1ab/nsp6208Q208RQ3777Rnonsyn115941159511596cAgcGg13100.968935
AY.109ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt13350.987426
AY.109ORF1ab/nsp12466I466VI4858Vnonsyn148361483714838AtcGtc9680.715976
AY.109ORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt13360.988166
AY.109ORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa13470.996302
AY.109ORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt13390.990385
AY.109S19T19Rnonsyn216172161821619aCaaGa13190.975592
AY.109S95T95Inonsyn218452184621847aCtaTt10710.79216
AY.109S142G142Dnonsyn219862198721988gGtgAt8130.601331
AY.109S156E156deldel220282202922030GAG---12070.892751
AY.109S157F157deldel220312203222033TTC---12110.89571
AY.109S158R158Gnonsyn220342203522036AgaGga12050.891272
AY.109S452L452Rnonsyn229162291722918cTgcGg13000.961538
AY.109S478T478Knonsyn229942299522996aCaaAa13020.963018
AY.109S614D614Gnonsyn234022340323404gAtgGt13521
AY.109S681P681Rnonsyn236032360423605cCtcGt13350.987426
AY.109S950D950Nnonsyn244102441124412GatAat13140.971893
AY.109ORF3a26S26Lnonsyn254682546925470tCatTa13330.985947
AY.109M82I82Tnonsyn267662676726768aTcaCc13510.99926
AY.109ORF7a52N52Nsyn275472754827549aaCaaT9840.727811
AY.109ORF7a82V82Anonsyn276372763827639gTtgCt10850.802515
AY.109ORF7a120T120Inonsyn277512775227753aCaaTa12540.927515
AY.109ORF7b40T40Inonsyn278732787427875aCtaTt13390.990385
AY.109ORF8119D119deldel282482824928250GAT---13230.97855
AY.109ORF8120F120deldel282512825228253TTC---13240.97929
AY.109noncoding28271A28271-noncoding282712827128271A-12220.903846
AY.109N63D63Gnonsyn284602846128462gAcgGc13200.976331
AY.109N203R203Mnonsyn288802888128882aGgaTg13521
AY.109N215G215Cnonsyn289162891728918GgtTgt13450.994822
AY.109N377D377Ynonsyn294022940329404GatTat13380.989645
AY.109noncoding29742G29742Tnoncoding297422974229742GT12750.943047