CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AV.1

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LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AV.1 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AV.1noncoding241C241Tnoncoding241241241CT1860.939394
AV.1ORF1ab/nsp116L16LL16Lsyn311312313ctCctT1850.934343
AV.1ORF1ab/nsp175D75GD75Gnonsyn488489490gAtgGt1860.939394
AV.1ORF1ab/nsp1169V169VV169Vsyn770771772gtTgtC1970.994949
AV.1ORF1ab/nsp2339G339SG519Snonsyn182018211822GgtAgt1970.994949
AV.1ORF1ab/nsp2411A411VA591Vnonsyn203620372038gCtgTt1940.979798
AV.1ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT1981
AV.1ORF1ab/nsp3342H342YH1160Ynonsyn374337443745CatTat1890.954545
AV.1ORF1ab/nsp3822P822LP1640Lnonsyn518351845185cCtcTt1970.994949
AV.1ORF1ab/nsp3927K927IK1745Inonsyn549854995500aAaaTa1880.949495
AV.1ORF1ab/nsp31303T1303TT2121Tsyn662666276628acCacT1870.944444
AV.1ORF1ab/nsp31587N1587SN2405Snonsyn747874797480aAtaGt1970.994949
AV.1ORF1ab/nsp4446A446VA3209Vnonsyn989098919892gCtgTt1960.989899
AV.1ORF1ab/nsp6106S106delS3675deldel112881128911290TCT---1950.984848
AV.1ORF1ab/nsp6107G107delG3676deldel112911129211293GGT---1950.984848
AV.1ORF1ab/nsp6108F108delF3677deldel112941129511296TTT---1950.984848
AV.1ORF1ab/nsp6177G177GG3746Gsyn115011150211503ggTggC1960.989899
AV.1ORF1ab/nsp12273Y273YY4665Ysyn142571425814259taTtaC1870.944444
AV.1ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt1970.994949
AV.1ORF1ab/nsp12434S434AS4826Anonsyn147401474114742TctGct1970.994949
AV.1ORF1ab/nsp13481T481MT5805Mnonsyn176771767817679aCgaTg1880.949495
AV.1ORF1ab/nsp14A2-B119A119VA6044Vnonsyn183941839518396gCtgTt1970.994949
AV.1S80D80Gnonsyn218002180121802gAtgGt1970.994949
AV.1S95T95Inonsyn218452184621847aCtaTt1950.984848
AV.1S142G142Dnonsyn219862198721988gGtgAt1940.979798
AV.1S144Y144deldel219922199321994TAT---1920.969697
AV.1S375S375Ssyn226852268622687tcCtcT1820.919192
AV.1S439N439Knonsyn228772287822879aaCaaG1780.89899
AV.1S484E484Knonsyn230122301323014GaaAaa1800.909091
AV.1S614D614Gnonsyn234022340323404gAtgGt1981
AV.1S681P681Hnonsyn236032360423605cCtcAt1950.984848
AV.1S1130I1130Vnonsyn249502495124952AtaGta1970.994949
AV.1S1139D1139Hnonsyn249772497824979GatCat1900.959596
AV.1ORF3a256V256deldel261582615926160GTT---1930.974747
AV.1ORF3a257N257del1del261612616226163Aat-at1920.969697
AV.1M63A63Tnonsyn267092671026711GctAct1960.989899
AV.1M125H125Ynonsyn268952689626897CatTat1960.989899
AV.1ORF632I32Isyn272952729627297atCatT1950.984848
AV.1noncoding28271A28271-noncoding282712827128271A-1960.989899
AV.1noncoding28272A28272-noncoding282722827228272A-1940.979798
AV.1N157I157Vnonsyn287422874328744AtCGtT1970.994949
AV.1N203R203Knonsyn288802888128882aGGaAA1970.994949
AV.1N204G204Rnonsyn288832888428885GgaCga1981