CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = AF.1

Use the dropdown lists below to filter the mutations displayed in the table, click the 'Refresh Table' to update.

LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = AF.1 ; ORF = All
Mutation Type = All ; Min count = 1 ; Min prop = 0.5


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AF.1noncoding241C241Tnoncoding241241241CT271
AF.1ORF1ab/nsp116L16LL16Lsyn311312313ctCctT271
AF.1ORF1ab/nsp3106F106FF924Fsyn303530363037ttCttT271
AF.1ORF1ab/nsp3171G171CG989Cnonsyn323032313232GgtTgt271
AF.1ORF1ab/nsp31436M1436IM2254Inonsyn702570267027atGatT260.962963
AF.1ORF1ab/nsp4128A128VA2891Vnonsyn893689378938gCagTa271
AF.1ORF1ab/nsp6149V149FV3718Fnonsyn114171141811419GttTtt271
AF.1ORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt271
AF.1ORF1ab/nsp13265N265SN5589Snonsyn170291703017031aAtaGt260.962963
AF.1ORF1ab/nsp14A2-B71N71NN5996Nsyn182501825118252aaCaaT271
AF.1ORF1ab/nsp14A2-B274A274SA6199Snonsyn188591886018861GcaTca271
AF.1ORF1ab/nsp14A2-B377F377FF6302Fsyn191681916919170ttCttT271
AF.1S614D614Gnonsyn234022340323404gAtgGt271
AF.1ORF3a110A110Snonsyn257202572125722GctTct260.962963
AF.1ORF7a40Y40Ysyn275112751227513taCtaT260.962963
AF.1N41R41Rsyn283942839528396cgGcgA220.814815
AF.1N192N192Nsyn288472884828849aaCaaT271
AF.1N203R203Knonsyn288802888128882aGGaAA271
AF.1N204G204Rnonsyn288832888428885GgaCga271