CoV-GLUE | Mutations

CoV-GLUE Mutations: Lineage = All

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LOWER THE MinProp value to see lower frequency mutations in the table.

Lineage: ORF: Mutation type: Min count: Min prop:


Lineage = All ; ORF = All
Mutation Type = nonsyn ; Min count = 1 ; Min prop = 0.01


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LineageORFCodonNumMutationORF1abMutTypeC1C2C3RefCodonMutCodonCountProportion
AllS614D614Gnonsyn234022340323404gAtgGt51825110.991216
AllORF1ab/nsp12323P323LP4715Lnonsyn144071440814409cCtcTt51443750.983923
AllS452L452Rnonsyn229162291722918cTgcGg27720690.530191
AllM82I82Tnonsyn267662676726768aTcaCc27692410.52965
AllS681P681Rnonsyn236032360423605cCtcGt27625600.528372
AllORF3a26S26Lnonsyn254682546925470tCatTa27588770.527668
AllN377D377Ynonsyn294022940329404GatTat27471980.525434
AllORF1ab/nsp1377P77LP5401Lnonsyn164651646616467cCacTa27376050.523599
AllN203R203Mnonsyn288802888128882aGgaTg27347400.523051
AllS19T19Rnonsyn216172161821619aCaaGa27190650.520053
AllORF1ab/nsp12671G671SG5063Snonsyn154511545215453GgtAgt27188260.520008
AllS478T478Knonsyn229942299522996aCaaAa27091600.518159
AllN63D63Gnonsyn284602846128462gAcgGc26841610.513378
AllS950D950Nnonsyn244102441124412GatAat26817000.512907
AllORF7a120T120Inonsyn277512775227753aCaaTa26386780.504678
AllORF7a82V82Anonsyn276372763827639gTtgCt25962390.496561
AllS158R158Gnonsyn220342203522036AgaGga25195500.481894
AllORF1ab/nsp4492T492IT3255Inonsyn100281002910030aCcaTc24680930.472052
AllORF1ab/nsp677T77AT3646Anonsyn112011120211203ActGct24265630.464109
AllORF1ab/nsp14A2-B394A394VA6319Vnonsyn192191922019221gCtgTt24229770.463423
AllORF1ab/nsp4167V167LV2930Lnonsyn905390549055GtaTta24173580.462348
AllORF1ab/nsp31228P1228LP2046Lnonsyn640164026403cCacTa24097350.46089
AllN215G215Cnonsyn289162891728918GgtTgt23959200.458248
AllORF1ab/nsp3488A488SA1306Snonsyn418141824183GctTct23941550.45791
AllORF7b40T40Inonsyn278732787427875aCtaTt23813700.455465
AllORF1ab/nsp31469P1469SP2287Snonsyn712471257126CctTct23642960.4522
AllS142G142Dnonsyn219862198721988gGtgAt17621110.337025
AllN203R203Knonsyn288802888128882aGGaAA15218020.291063
AllN204G204Rnonsyn288832888428885GgaCga14409560.2756
AllS501N501Ynonsyn230632306423065AatTat12928780.247278
AllS681P681Hnonsyn236032360423605cCtcAt12234730.234004
AllORF1ab/nsp3183T183IT1001Inonsyn326632673268aCtaTt11519250.220319
AllS716T716Inonsyn237082370923710aCaaTa11471790.219412
AllS570A570Dnonsyn232702327123272gCtgAt11445830.218915
AllS1118D1118Hnonsyn249142491524916GacCac11443770.218876
AllORF1ab/nsp3890A890DA1708Dnonsyn538753885389gCtgAt11426510.218546
AllORF827Q27Xnonsyn279722797327974CaaTaa11416070.218346
AllORF873Y73Cnonsyn281102811128112tActGc11413060.218288
AllN235S235Fnonsyn289762897728978tCttTt11403620.218108
AllORF852R52Inonsyn280472804828049aGaaTa11397020.217981
AllS982S982Anonsyn245062450724508TcaGca11394180.217927
AllN3D3Lnonsyn282802828128282GATCTA11299000.216107
AllORF1ab/nsp31412I1412TI2230Tnonsyn695369546955aTaaCa11224270.214677
AllS95T95Inonsyn218452184621847aCtaTt11022450.210817
AllORF1ab/nsp31711A1711VA2529Vnonsyn785078517852gCtgTt7197740.137665
AllORF3a57Q57Hnonsyn255612556225563caGcaT5141390.098335
AllS222A222Vnonsyn222262222722228gCtgTt4558530.087187
AllORF868K68Xnonsyn280952809628097AaaTaa4054570.077548
AllORF1ab/nsp285T85IT265Inonsyn105810591060aCcaTc3993470.07638
AllORF1ab/nsp4446A446VA3209Vnonsyn989098919892gCtgTt3279580.062726
AllORF1ab/nsp3822P822LP1640Lnonsyn518351845185cCtcTt3215440.061499
AllORF1ab/nsp6149V149AV3718Anonsyn114171141811419gTtgCt2960850.05663
AllORF1ab/nsp13460K460RK5784Rnonsyn176141761517616aAgaGg2435240.046577
AllORF1ab/nsp6181T181IT3750Inonsyn115131151411515aCtaTt2399550.045894
AllS484E484Knonsyn230122301323014GaaAaa2297570.043944
AllS18L18Fnonsyn216142161521616CttTtt2222670.042511
AllORF1030V30Lnonsyn296452964629647GtaTta1771330.033879
AllN220A220Vnonsyn289312893228933gCtgTt1746710.033408
AllORF1ab/nsp13334I334VI5658Vnonsyn172361723717238AtaGta1741400.033306
AllORF1ab/nsp12227P227LP4619Lnonsyn141191412014121cCacTa1729860.033086
AllN199P199Lnonsyn288682886928870cCacTa1707700.032662
AllORF3a239E239Qnonsyn261072610826109GagCag1657180.031696
AllN205T205Inonsyn288862888728888aCtaTt1656710.031687
AllORF1ab/nsp12192F192VF4584Vnonsyn140141401514016TtcGtc1645570.031473
AllORF1ab/nsp12838L838IL5230Inonsyn159521595315954CtaAta1571380.030055
AllN9Q9Lnonsyn282982829928300cAgcTg1561990.029875
AllORF1ab/nsp31736A1736VA2554Vnonsyn792579267927gCagTa1541570.029484
AllORF824S24Lnonsyn279632796427965tCatTa1416020.027083
AllS5L5Fnonsyn215752157621577CttTtt1400510.026786
AllORF1ab/nsp5A-B89L89FL3352Fnonsyn103191032010321CttTtt1364710.026102
AllORF1ab/nsp637L37FL3606Fnonsyn110811108211083ttGttT1334000.025514
AllS1176V1176Fnonsyn250882508925090GttTtt1303430.02493
AllORF3a172G172Vnonsyn259062590725908gGtgTt1290150.024676
AllORF1ab/nsp14A2-B129N129DN6054Dnonsyn184241842518426AatGat1267190.024237
AllN67P67Snonsyn284722847328474CctTct1264410.024183
AllS26P26Snonsyn216382163921640CctTct1248840.023886
AllORF1ab/nsp13341E341DE5665Dnonsyn172571725817259gaGgaT1245060.023813
AllS1027T1027Inonsyn246412464224643aCtaTt1232720.023577
AllORF1ab/nsp281K81NK261Nnonsyn104610471048aaGaaT1232490.023573
AllS138D138Ynonsyn219742197521976GatTat1229780.023521
AllS655H655Ynonsyn235252352623527CatTat1228230.023491
AllORF1ab/nsp12694F694YF5086Ynonsyn155201552115522tTttAt1214210.023223
AllORF1ab/nsp3370S370LS1188Lnonsyn382738283829tCatTa1198700.022927
AllORF1ab/nsp6162I162VI3731Vnonsyn114561145711458AttGtt1185330.022671
AllORF1ab/nsp5A-B90K90RK3353Rnonsyn103221032310324aAgaGg1177580.022523
AllORF892E92Knonsyn281672816828169GaaAaa1159680.02218
AllORF1ab/nsp16216R216CR7014Cnonsyn213042130521306CgcTgc1155370.022098
AllORF1ab/nsp3977K977QK1795Qnonsyn564856495650AaaCaa1150020.021995
AllORF3a253S253Pnonsyn261492615026151TccCcc1149660.021989
AllN80P80Rnonsyn285112851228513cCacGa1147720.021952
AllS20T20Nnonsyn216202162121622aCcaAc1122700.021473
AllS417K417Tnonsyn228112281222813aAgaCg1109080.021212
AllS190R190Snonsyn221302213122132agGagT1086110.020773
AllN194S194Lnonsyn288532885428855tCatTa981840.018779
AllORF1ab/nsp2129P129LP309Lnonsyn119011911192cCacTa974760.018643
AllORF1ab/nsp13164H164YH5488Ynonsyn167261672716728CatTat967300.018501
AllORF1ab/nsp16160K160RK6958Rnonsyn211362113721138aAgaGg898820.017191
AllORF1ab/nsp2550L550FL730Fnonsyn245324542455CtcTtc870920.016657
AllN204G204Pnonsyn288832888428885GGaCCa832750.015927
AllORF1ab/nsp6197C197FC3766Fnonsyn115611156211563tGctTc779730.014913
AllORF1ab/nsp13261E261DE5585Dnonsyn170171701817019gaGgaT769700.014721
AllS701A701Vnonsyn236632366423665gCagTa764460.014621
AllORF7a116L116Fnonsyn277392774027741CtcTtc756700.014473
AllORF1ab/nsp31307H1307YH2125Ynonsyn663866396640CatTat737940.014114
AllN234M234Inonsyn289732897428975atGatT733370.014027
AllORF1ab/nsp494V94AV2857Anonsyn883488358836gTcgCc733200.014023
AllS477S477Nnonsyn229912299222993aGcaAc719870.013768
AllORF1ab/nsp31441M1441IM2259Inonsyn704070417042atGatT708490.013551
AllORF1ab/nsp3410D410GD1228Gnonsyn394739483949gAtgGt708170.013545
AllORF7a45P45Lnonsyn275262752727528cCacTa707020.013523
AllORF1ab/nsp824Q24RQ3966Rnonsyn121611216212163cAgcGg701770.013422
AllORF860L60Fnonsyn280712807228073ttGttT692350.013242
AllORF1ab/nsp3932V932AV1750Anonsyn551355145515gTggCg685890.013118
AllORF1ab/nsp4438L438PL3201Pnonsyn986698679868cTtcCt677970.012967
AllORF1ab/nsp13260D260YD5584Ynonsyn170141701517016GatTat663890.012698
AllORF3a131W131Cnonsyn257832578425785tgGtgT643220.012302
AllORF3a42P42Lnonsyn255162551725518cCtcTt641110.012262
AllS13S13Inonsyn215992160021601aGtaTt620270.011863
AllS1264V1264Lnonsyn253522535325354GtgTtg615390.01177
AllORF1ab/nsp13296A296SA5620Snonsyn171221712317124GctTct614050.011744
AllS152W152Cnonsyn220162201722018tgGtgT609680.011661
AllORF1ab/nsp14A2-B46P46LP5971Lnonsyn181751817618177cCtcTt606480.0116
AllS1214W1214Gnonsyn252022520325204TggGgg604740.011566
AllORF1ab/nsp16238Q238HQ7036Hnonsyn213702137121372caGcaT595320.011386
AllN327S327Lnonsyn292522925329254tCgtTg594440.011369
AllORF3a171S171Lnonsyn259032590425905tCatTa591220.011308
AllORF811T11Inonsyn279242792527926aCaaTa584270.011175
AllORF7a71V71Inonsyn276042760527606GtaAta556620.010646
AllS145Y145Hnonsyn219952199621997TacCac545910.010441
AllORF1ab/nsp2339G339SG519Snonsyn182018211822GgtAgt536170.010255
AllORF1ab/nsp31788M1788IM2606Inonsyn808180828083atGatA526930.010078