CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 29779 | G29779T | noncoding | G | T | 23349 | 23349 | 1 | 29779-29779 |
Details of the mutation G29779T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 29779 | G29779T | G | T | 23349 | 23349 | All | 0.004466 |
noncoding | 29779 | G29779T | G | T | 4141 | 4141 | B.1.617.2 | 0.015593 |
noncoding | 29779 | G29779T | G | T | 3013 | 3013 | B.1.1.7 | 0.002697 |
noncoding | 29779 | G29779T | G | T | 2356 | 2356 | B.1.497 | 0.74158 |
noncoding | 29779 | G29779T | G | T | 2100 | 2100 | AY.43 | 0.009304 |
noncoding | 29779 | G29779T | G | T | 1246 | 1246 | AY.4 | 0.001939 |
noncoding | 29779 | G29779T | G | T | 1197 | 1197 | B.1.621 | 0.105957 |
noncoding | 29779 | G29779T | G | T | 1083 | 1083 | B.1.367 | 0.858162 |
noncoding | 29779 | G29779T | G | T | 1041 | 1041 | B.1.2 | 0.009166 |
noncoding | 29779 | G29779T | G | T | 675 | 675 | B.1.361 | 0.869845 |
noncoding | 29779 | G29779T | G | T | 662 | 662 | AY.44 | 0.004029 |
noncoding | 29779 | G29779T | G | T | 439 | 439 | AY.103 | 0.002726 |
noncoding | 29779 | G29779T | G | T | 346 | 346 | AY.25 | 0.002081 |
noncoding | 29779 | G29779T | G | T | 311 | 311 | B.1 | 0.002849 |
noncoding | 29779 | G29779T | G | T | 302 | 302 | AY.3 | 0.003004 |
noncoding | 29779 | G29779T | G | T | 291 | 291 | B.1.429 | 0.006847 |
noncoding | 29779 | G29779T | G | T | 276 | 276 | AY.5 | 0.005699 |
noncoding | 29779 | G29779T | G | T | 181 | 181 | D.2 | 0.013582 |
noncoding | 29779 | G29779T | G | T | 150 | 150 | AY.39 | 0.003707 |
noncoding | 29779 | G29779T | G | T | 150 | 150 | B.1.1 | 0.002721 |
noncoding | 29779 | G29779T | G | T | 137 | 137 | AY.102 | 0.003632 |
noncoding | 29779 | G29779T | G | T | 114 | 114 | B.1.177 | 0.001501 |
noncoding | 29779 | G29779T | G | T | 112 | 112 | B.1.306 | 0.64 |
noncoding | 29779 | G29779T | G | T | 99 | 99 | B.1.160 | 0.003088 |
noncoding | 29779 | G29779T | G | T | 94 | 94 | P.1.14 | 0.004493 |
noncoding | 29779 | G29779T | G | T | 88 | 88 | AY.35 | 0.020508 |
noncoding | 29779 | G29779T | G | T | 71 | 71 | AY.26 | 0.00201 |
noncoding | 29779 | G29779T | G | T | 70 | 70 | P.1 | 0.001103 |
noncoding | 29779 | G29779T | G | T | 62 | 62 | AY.29 | 0.000978 |
noncoding | 29779 | G29779T | G | T | 57 | 57 | B.1.444 | 0.904762 |
noncoding | 29779 | G29779T | G | T | 53 | 53 | AY.46 | 0.005516 |
noncoding | 29779 | G29779T | G | T | 51 | 51 | C.36.3 | 0.028928 |
noncoding | 29779 | G29779T | G | T | 45 | 45 | AY.54 | 0.004291 |
noncoding | 29779 | G29779T | G | T | 44 | 44 | B.1.243 | 0.003062 |
noncoding | 29779 | G29779T | G | T | 43 | 43 | AY.119 | 0.001518 |
noncoding | 29779 | G29779T | G | T | 42 | 42 | B.1.351 | 0.001249 |
noncoding | 29779 | G29779T | G | T | 42 | 42 | C.36 | 0.038251 |
noncoding | 29779 | G29779T | G | T | 38 | 38 | AY.98 | 0.003002 |
noncoding | 29779 | G29779T | G | T | 38 | 38 | AY.98.1 | 0.00184 |
noncoding | 29779 | G29779T | G | T | 38 | 38 | B.1.258.14 | 0.037255 |
noncoding | 29779 | G29779T | G | T | 37 | 37 | AY.33 | 0.002471 |
noncoding | 29779 | G29779T | G | T | 34 | 34 | AY.113 | 0.004841 |
noncoding | 29779 | G29779T | G | T | 33 | 33 | B.1.1.227 | 0.143478 |
noncoding | 29779 | G29779T | G | T | 32 | 32 | AY.20 | 0.001244 |
noncoding | 29779 | G29779T | G | T | 31 | 31 | AY.120.1 | 0.009952 |
noncoding | 29779 | G29779T | G | T | 30 | 30 | AY.120 | 0.001115 |
noncoding | 29779 | G29779T | G | T | 30 | 30 | AY.46.6 | 0.002166 |
noncoding | 29779 | G29779T | G | T | 30 | 30 | B.1.177.86 | 0.005504 |
noncoding | 29779 | G29779T | G | T | 29 | 29 | AY.4.2 | 0.000629 |
noncoding | 29779 | G29779T | G | T | 28 | 28 | B.1.427 | 0.001414 |
noncoding | 29779 | G29779T | G | T | 27 | 27 | B.1.517 | 0.011529 |
noncoding | 29779 | G29779T | G | T | 26 | 26 | AY.99.2 | 0.002396 |
noncoding | 29779 | G29779T | G | T | 26 | 26 | B.60 | 0.412698 |
noncoding | 29779 | G29779T | G | T | 25 | 25 | AY.4.5 | 0.002687 |
noncoding | 29779 | G29779T | G | T | 25 | 25 | B.1.526 | 0.000588 |
noncoding | 29779 | G29779T | G | T | 24 | 24 | AY.47 | 0.000747 |
noncoding | 29779 | G29779T | G | T | 24 | 24 | B.1.36.8 | 0.024 |
noncoding | 29779 | G29779T | G | T | 23 | 23 | A.29 | 0.12234 |
noncoding | 29779 | G29779T | G | T | 23 | 23 | B.1.258 | 0.001531 |
noncoding | 29779 | G29779T | G | T | 22 | 22 | AY.23 | 0.001534 |
noncoding | 29779 | G29779T | G | T | 22 | 22 | AY.5.4 | 0.006087 |
noncoding | 29779 | G29779T | G | T | 21 | 21 | B.1.1.519 | 0.000834 |
noncoding | 29779 | G29779T | G | T | 21 | 21 | B.1.617.1 | 0.002708 |
noncoding | 29779 | G29779T | G | T | 21 | 21 | Q.1 | 0.002653 |
noncoding | 29779 | G29779T | G | T | 20 | 20 | AY.114 | 0.004622 |
noncoding | 29779 | G29779T | G | T | 20 | 20 | AY.45 | 0.002434 |
noncoding | 29779 | G29779T | G | T | 20 | 20 | AY.75 | 0.00112 |
noncoding | 29779 | G29779T | G | T | 20 | 20 | B.1.1.25 | 0.01137 |
noncoding | 29779 | G29779T | G | T | 20 | 20 | B.1.1.70 | 0.006821 |
noncoding | 29779 | G29779T | G | T | 19 | 19 | AY.100 | 0.000874 |
noncoding | 29779 | G29779T | G | T | 19 | 19 | AY.42 | 0.000764 |
noncoding | 29779 | G29779T | G | T | 19 | 19 | B.1.596 | 0.001656 |
noncoding | 29779 | G29779T | G | T | 18 | 18 | B.1.1.214 | 0.000998 |
noncoding | 29779 | G29779T | G | T | 18 | 18 | B.1.221.2 | 0.072289 |
noncoding | 29779 | G29779T | G | T | 18 | 18 | B.1.576 | 0.016319 |
noncoding | 29779 | G29779T | G | T | 17 | 17 | B.1.36.29 | 0.008795 |
noncoding | 29779 | G29779T | G | T | 16 | 16 | AY.111 | 0.00293 |
noncoding | 29779 | G29779T | G | T | 16 | 16 | AY.99 | 0.016789 |
noncoding | 29779 | G29779T | G | T | 16 | 16 | B.1.177.81 | 0.003029 |
noncoding | 29779 | G29779T | G | T | 16 | 16 | B.1.234 | 0.002111 |
noncoding | 29779 | G29779T | G | T | 16 | 16 | C.37 | 0.001857 |
noncoding | 29779 | G29779T | G | T | 15 | 15 | AY.117 | 0.001268 |
noncoding | 29779 | G29779T | G | T | 15 | 15 | AY.9 | 0.001014 |
noncoding | 29779 | G29779T | G | T | 15 | 15 | B.1.177.73 | 0.008494 |
noncoding | 29779 | G29779T | G | T | 14 | 14 | AY.52 | 0.011401 |
noncoding | 29779 | G29779T | G | T | 14 | 14 | AY.6 | 0.000576 |
noncoding | 29779 | G29779T | G | T | 14 | 14 | AY.61 | 0.001467 |
noncoding | 29779 | G29779T | G | T | 14 | 14 | B | 0.001789 |
noncoding | 29779 | G29779T | G | T | 13 | 13 | AY.118 | 0.000814 |
noncoding | 29779 | G29779T | G | T | 13 | 13 | AY.30 | 0.005144 |
noncoding | 29779 | G29779T | G | T | 13 | 13 | AY.36 | 0.001927 |
noncoding | 29779 | G29779T | G | T | 13 | 13 | B.1.1.1 | 0.004247 |
noncoding | 29779 | G29779T | G | T | 12 | 12 | AZ.1 | 0.010408 |
noncoding | 29779 | G29779T | G | T | 12 | 12 | B.1.1.222 | 0.002448 |
noncoding | 29779 | G29779T | G | T | 12 | 12 | B.1.1.306 | 0.005261 |
noncoding | 29779 | G29779T | G | T | 12 | 12 | B.1.564 | 0.005111 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | AY.116 | 0.003155 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | AY.12 | 0.003477 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | AY.34 | 0.001067 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | B.1.1.263 | 0.017134 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | B.1.1.46 | 0.048035 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | B.1.1.521 | 0.058824 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | B.1.170 | 0.047414 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | B.1.177.60 | 0.002403 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | B.1.36 | 0.001605 |
noncoding | 29779 | G29779T | G | T | 11 | 11 | B.1.525 | 0.001245 |
noncoding | 29779 | G29779T | G | T | 10 | 10 | A | 0.00387 |
noncoding | 29779 | G29779T | G | T | 10 | 10 | AY.70 | 0.002085 |
noncoding | 29779 | G29779T | G | T | 10 | 10 | B.1.160.23 | 0.048309 |
noncoding | 29779 | G29779T | G | T | 10 | 10 | B.1.406 | 0.060606 |
noncoding | 29779 | G29779T | G | T | 10 | 10 | B.1.466.2 | 0.003912 |
noncoding | 29779 | G29779T | G | T | 10 | 10 | P.1.7 | 0.003193 |
noncoding | 29779 | G29779T | G | T | 9 | 9 | AY.97 | 0.015306 |
noncoding | 29779 | G29779T | G | T | 9 | 9 | B.1.1.50 | 0.00611 |
noncoding | 29779 | G29779T | G | T | 9 | 9 | B.1.561 | 0.003573 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | AY.13 | 0.001288 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | AY.14 | 0.000704 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | AY.16.1 | 0.003759 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | AY.46.4 | 0.001316 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | AY.88 | 0.007073 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | AY.9.2 | 0.000294 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | B.1.1.216 | 0.007124 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | B.1.1.318 | 0.002414 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | B.1.160.17 | 0.013605 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | B.1.428 | 0.008163 |
noncoding | 29779 | G29779T | G | T | 8 | 8 | P.1.17 | 0.001294 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | AY.105 | 0.004502 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | AY.110 | 0.000789 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | AY.5.3 | 0.002362 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | AY.58 | 0.006352 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | AY.72 | 0.009524 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | AY.85 | 0.00299 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | B.1.1.269 | 0.009472 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | B.1.1.33 | 0.002946 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | B.1.240 | 0.001509 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | B.1.471 | 0.019126 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | B.1.509 | 0.006061 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | B.1.575 | 0.002124 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | B.1.621.1 | 0.003541 |
noncoding | 29779 | G29779T | G | T | 7 | 7 | P.1.15 | 0.001626 |
noncoding | 29779 | G29779T | G | T | 6 | 6 | A.27 | 0.009934 |
noncoding | 29779 | G29779T | G | T | 6 | 6 | AU.2 | 0.014528 |
noncoding | 29779 | G29779T | G | T | 6 | 6 | AY.22 | 0.012552 |
noncoding | 29779 | G29779T | G | T | 6 | 6 | AY.75.1 | 0.001082 |
noncoding | 29779 | G29779T | G | T | 6 | 6 | B.1.221 | 0.000426 |
noncoding | 29779 | G29779T | G | T | 6 | 6 | B.1.369 | 0.001711 |
noncoding | 29779 | G29779T | G | T | 6 | 6 | B.1.580 | 0.02439 |
noncoding | 29779 | G29779T | G | T | 6 | 6 | B.1.632 | 0.040268 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | AY.71 | 0.002375 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | AY.84 | 0.002187 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | B.1.1.28 | 0.001556 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | B.1.1.63 | 0.001929 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | B.1.177.10 | 0.00439 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | B.1.177.83 | 0.007407 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | B.1.311 | 0.001373 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | B.1.556 | 0.037594 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | B.1.609 | 0.002397 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | B.1.637 | 0.000365 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | B.1.8 | 0.009862 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | N.4 | 0.021277 |
noncoding | 29779 | G29779T | G | T | 5 | 5 | R.1 | 0.00045 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | A.5 | 0.007692 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.106 | 0.00134 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.108 | 0.00441 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.121 | 0.000541 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.24 | 0.001724 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.3.1 | 0.000341 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.39.1 | 0.000158 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.4.4 | 0.001637 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.48 | 0.00186 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.67 | 0.001857 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.89 | 0.019608 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AY.9.1 | 0.000335 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | AZ.2 | 0.003284 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | B.1.1.13 | 0.142857 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | B.1.1.170 | 0.004988 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | B.1.1.294 | 0.005063 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | B.1.1.301 | 0.004717 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | B.1.119 | 0.042105 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | B.1.462 | 0.028986 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | B.1.532 | 0.024845 |
noncoding | 29779 | G29779T | G | T | 4 | 4 | B.1.582 | 0.001963 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.19 | 0.003421 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.2 | 0.001068 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.21 | 0.005693 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.27 | 0.000194 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.38 | 0.001498 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.4.2.1 | 0.000447 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.55 | 0.002752 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.76 | 0.014493 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.77 | 0.003382 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.91 | 0.002191 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.92 | 0.000862 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | AY.99.1 | 0.004658 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.1.169 | 0.054545 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.1.221 | 0.030303 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.1.234 | 0.036145 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.1.317 | 0.001235 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.1.325 | 0.076923 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.1.326 | 0.005282 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.1.335 | 0.038961 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.1.37 | 0.000579 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.111 | 0.003525 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.157 | 0.008955 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.179 | 0.011278 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.499 | 0.003151 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.595 | 0.000783 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.620 | 0.002838 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.1.623 | 0.001609 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | B.40 | 0.001093 |
noncoding | 29779 | G29779T | G | T | 3 | 3 | P.1.12 | 0.001452 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | A.1 | 0.000564 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AE.8 | 0.000978 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.1 | 0.000791 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.104 | 0.003968 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.107 | 0.000932 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.109 | 0.001479 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.32 | 0.001065 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.34.1 | 0.00102 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.50 | 0.001599 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.53 | 0.000575 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.56 | 0.00321 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.59 | 0.001059 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.7.1 | 0.000225 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.87 | 0.001665 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.94 | 0.000885 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.95 | 0.001522 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | AY.96 | 0.004149 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.111 | 0.029412 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.138 | 0.012121 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.176 | 0.000879 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.192 | 0.004619 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.258 | 0.006515 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.343 | 0.041667 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.356 | 0.017094 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.372 | 0.001377 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.374 | 0.004751 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.375 | 0.02381 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.434 | 0.000697 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.51 | 0.003436 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.1.528 | 0.009615 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.108 | 0.011628 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.177.21 | 0.000153 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.177.6 | 0.001953 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.214.3 | 0.014286 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.239 | 0.002442 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.258.17 | 0.000208 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.258.3 | 0.00335 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.349 | 0.00143 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.36.1 | 0.002281 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.389 | 0.002004 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.396 | 0.001411 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.470 | 0.002809 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.523 | 0.004902 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.560 | 0.009259 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.577 | 0.001375 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.597 | 0.009259 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.610 | 0.007092 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.619 | 0.001742 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.619.1 | 0.001283 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.625 | 0.004706 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.628 | 0.000705 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.1.78 | 0.017094 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | B.4.5 | 0.02381 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | C.23 | 0.011628 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | P.1.11 | 0.020408 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | Q.2 | 0.001227 |
noncoding | 29779 | G29779T | G | T | 2 | 2 | Q.4 | 0.00091 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | A.15 | 0.015873 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | A.2 | 0.000662 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | A.2.5 | 0.000499 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AC.1 | 0.037037 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AU.1 | 0.001266 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.116.1 | 0.000311 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.23.1 | 0.000417 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.37 | 0.000316 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.40 | 0.000964 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.41 | 0.000294 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.46.1 | 0.001027 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.46.2 | 0.000635 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.49 | 0.003195 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.57 | 0.000656 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.63 | 0.000387 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.64 | 0.000595 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.65 | 0.000533 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.69 | 0.000187 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.74 | 0.000116 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.78 | 0.001541 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.8 | 0.000606 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.86 | 0.00083 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | AY.90 | 0.000684 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.110 | 0.090909 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.152 | 0.04 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.161 | 0.003534 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.163 | 0.007634 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.207 | 0.001182 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.219 | 0.005 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.228 | 0.003049 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.230 | 0.009174 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.254 | 0.011236 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.27 | 0.00565 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.277 | 0.000759 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.282 | 0.011628 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.309 | 0.005848 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.311 | 0.000358 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.322 | 0.008772 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.333 | 0.001076 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.344 | 0.010753 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.368 | 0.003086 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.370 | 0.012658 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.388 | 0.045455 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.397 | 0.002252 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.402 | 0.011111 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.409 | 0.002833 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.420 | 0.001006 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.45 | 0.014085 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.462 | 0.008621 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.1.52 | 0.012195 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.112 | 0.005181 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.126 | 0.001276 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.160.28 | 0.002924 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.177.12 | 0.000152 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.177.4 | 0.000211 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.177.42 | 0.000894 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.177.44 | 0.000519 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.177.54 | 0.000606 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.177.57 | 0.000281 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.177.63 | 0.002703 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.177.65 | 0.000665 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.177.7 | 0.000165 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.199 | 0.004132 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.206 | 0.000816 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.214.2 | 0.0006 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.324 | 0.001605 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.351.2 | 0.000303 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.351.3 | 0.000876 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.351.5 | 0.0006 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.356 | 0.001727 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.36.10 | 0.004785 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.36.18 | 0.00042 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.36.22 | 0.001208 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.36.24 | 0.006173 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.36.7 | 0.004 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.375 | 0.00082 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.380 | 0.006623 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.382 | 0.008929 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.390 | 0.010638 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.399 | 0.001934 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.426 | 0.001009 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.434 | 0.052632 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.438 | 0.006536 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.443 | 0.004673 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.459 | 0.004082 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.468 | 0.005714 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.480 | 0.002488 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.492 | 0.007042 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.515 | 0.014493 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.538 | 0.008065 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.551 | 0.00129 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.562 | 0.018519 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.568 | 0.001111 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.602 | 0.006536 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.611 | 0.04 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.613 | 0.027027 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.1.93 | 0.000934 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.10 | 0.008264 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.4.1 | 0.018868 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.55 | 0.00295 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.6 | 0.00091 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.6.6 | 0.000889 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | B.61 | 0.005747 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | C.16 | 0.00106 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | C.35 | 0.000774 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | C.36.3.1 | 0.002717 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | C.37.1 | 0.002618 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | D.3 | 0.005917 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | N.1 | 0.016949 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | N.3 | 0.005814 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | N.5 | 0.001767 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | N.9 | 0.005952 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | P.1.1 | 0.000318 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | P.1.10 | 0.000269 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | P.1.4 | 0.000977 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | P.2 | 0.000187 |
noncoding | 29779 | G29779T | G | T | 1 | 1 | P.7 | 0.004367 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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