CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 29751 | G29751T | noncoding | G | T | 13552 | 13552 | 1 | 29751-29751 |
Details of the mutation G29751T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 29751 | G29751T | G | T | 13552 | 13552 | All | 0.002592 |
noncoding | 29751 | G29751T | G | T | 1756 | 1756 | B.1.177 | 0.023122 |
noncoding | 29751 | G29751T | G | T | 1687 | 1687 | AY.94 | 0.746791 |
noncoding | 29751 | G29751T | G | T | 1165 | 1165 | AY.4 | 0.001813 |
noncoding | 29751 | G29751T | G | T | 986 | 986 | B.1.1.316 | 0.912118 |
noncoding | 29751 | G29751T | G | T | 890 | 890 | B.1.617.2 | 0.003351 |
noncoding | 29751 | G29751T | G | T | 791 | 791 | B.1.1.7 | 0.000708 |
noncoding | 29751 | G29751T | G | T | 538 | 538 | B.1.1.486 | 0.84858 |
noncoding | 29751 | G29751T | G | T | 450 | 450 | AY.26 | 0.01274 |
noncoding | 29751 | G29751T | G | T | 292 | 292 | Q.8 | 0.048153 |
noncoding | 29751 | G29751T | G | T | 272 | 272 | AY.43 | 0.001205 |
noncoding | 29751 | G29751T | G | T | 262 | 262 | B.1.524 | 0.368495 |
noncoding | 29751 | G29751T | G | T | 251 | 251 | AY.44 | 0.001528 |
noncoding | 29751 | G29751T | G | T | 243 | 243 | AY.102 | 0.006443 |
noncoding | 29751 | G29751T | G | T | 200 | 200 | B.1.1.222 | 0.0408 |
noncoding | 29751 | G29751T | G | T | 182 | 182 | B.1.2 | 0.001603 |
noncoding | 29751 | G29751T | G | T | 176 | 176 | B.1 | 0.001612 |
noncoding | 29751 | G29751T | G | T | 169 | 169 | AY.103 | 0.001049 |
noncoding | 29751 | G29751T | G | T | 139 | 139 | AY.25 | 0.000836 |
noncoding | 29751 | G29751T | G | T | 117 | 117 | AY.61 | 0.012259 |
noncoding | 29751 | G29751T | G | T | 115 | 115 | B.1.1 | 0.002086 |
noncoding | 29751 | G29751T | G | T | 114 | 114 | AY.3 | 0.001134 |
noncoding | 29751 | G29751T | G | T | 114 | 114 | AY.5 | 0.002354 |
noncoding | 29751 | G29751T | G | T | 113 | 113 | AY.39 | 0.002792 |
noncoding | 29751 | G29751T | G | T | 110 | 110 | B.1.621 | 0.009737 |
noncoding | 29751 | G29751T | G | T | 101 | 101 | B.1.258.17 | 0.010501 |
noncoding | 29751 | G29751T | G | T | 85 | 85 | B.1.1.519 | 0.003375 |
noncoding | 29751 | G29751T | G | T | 83 | 83 | B.1.351 | 0.002467 |
noncoding | 29751 | G29751T | G | T | 81 | 81 | B.1.177.88 | 1 |
noncoding | 29751 | G29751T | G | T | 75 | 75 | P.1 | 0.001182 |
noncoding | 29751 | G29751T | G | T | 66 | 66 | R.2 | 0.956522 |
noncoding | 29751 | G29751T | G | T | 64 | 64 | B.1.429 | 0.001506 |
noncoding | 29751 | G29751T | G | T | 63 | 63 | AY.29 | 0.000994 |
noncoding | 29751 | G29751T | G | T | 51 | 51 | B.1.36 | 0.007441 |
noncoding | 29751 | G29751T | G | T | 50 | 50 | AY.16 | 0.018983 |
noncoding | 29751 | G29751T | G | T | 47 | 47 | AY.4.2 | 0.001019 |
noncoding | 29751 | G29751T | G | T | 47 | 47 | AY.99.2 | 0.004331 |
noncoding | 29751 | G29751T | G | T | 45 | 45 | AY.6 | 0.001851 |
noncoding | 29751 | G29751T | G | T | 44 | 44 | AY.59 | 0.023305 |
noncoding | 29751 | G29751T | G | T | 42 | 42 | AY.71 | 0.019952 |
noncoding | 29751 | G29751T | G | T | 40 | 40 | AY.120 | 0.001487 |
noncoding | 29751 | G29751T | G | T | 40 | 40 | B.1.177.89 | 0.97561 |
noncoding | 29751 | G29751T | G | T | 38 | 38 | B.1.160 | 0.001185 |
noncoding | 29751 | G29751T | G | T | 37 | 37 | AY.20 | 0.001438 |
noncoding | 29751 | G29751T | G | T | 36 | 36 | AY.74 | 0.004163 |
noncoding | 29751 | G29751T | G | T | 32 | 32 | R.1 | 0.00288 |
noncoding | 29751 | G29751T | G | T | 31 | 31 | B.1.1.214 | 0.001719 |
noncoding | 29751 | G29751T | G | T | 30 | 30 | B.1.526 | 0.000705 |
noncoding | 29751 | G29751T | G | T | 29 | 29 | AY.113 | 0.004129 |
noncoding | 29751 | G29751T | G | T | 27 | 27 | AY.3.1 | 0.002302 |
noncoding | 29751 | G29751T | G | T | 27 | 27 | B.1.177.10 | 0.023705 |
noncoding | 29751 | G29751T | G | T | 25 | 25 | B.1.596 | 0.002178 |
noncoding | 29751 | G29751T | G | T | 24 | 24 | B.1.1.25 | 0.013644 |
noncoding | 29751 | G29751T | G | T | 23 | 23 | AY.33 | 0.001536 |
noncoding | 29751 | G29751T | G | T | 23 | 23 | AY.98 | 0.001817 |
noncoding | 29751 | G29751T | G | T | 23 | 23 | B.1.1.378 | 0.167883 |
noncoding | 29751 | G29751T | G | T | 21 | 21 | AY.46 | 0.002186 |
noncoding | 29751 | G29751T | G | T | 20 | 20 | AY.75 | 0.00112 |
noncoding | 29751 | G29751T | G | T | 19 | 19 | AY.23 | 0.001325 |
noncoding | 29751 | G29751T | G | T | 18 | 18 | AY.13 | 0.002898 |
noncoding | 29751 | G29751T | G | T | 17 | 17 | AY.117 | 0.001437 |
noncoding | 29751 | G29751T | G | T | 17 | 17 | AY.98.1 | 0.000823 |
noncoding | 29751 | G29751T | G | T | 17 | 17 | B.1.110.3 | 0.012213 |
noncoding | 29751 | G29751T | G | T | 17 | 17 | B.1.378 | 0.116438 |
noncoding | 29751 | G29751T | G | T | 16 | 16 | AY.42 | 0.000644 |
noncoding | 29751 | G29751T | G | T | 13 | 13 | AY.121 | 0.001759 |
noncoding | 29751 | G29751T | G | T | 13 | 13 | AY.67 | 0.006035 |
noncoding | 29751 | G29751T | G | T | 13 | 13 | AY.9.2 | 0.000477 |
noncoding | 29751 | G29751T | G | T | 12 | 12 | AY.4.2.1 | 0.001788 |
noncoding | 29751 | G29751T | G | T | 12 | 12 | AY.5.4 | 0.00332 |
noncoding | 29751 | G29751T | G | T | 12 | 12 | B.1.258 | 0.000799 |
noncoding | 29751 | G29751T | G | T | 11 | 11 | AY.100 | 0.000506 |
noncoding | 29751 | G29751T | G | T | 11 | 11 | AY.119 | 0.000388 |
noncoding | 29751 | G29751T | G | T | 11 | 11 | AY.47 | 0.000342 |
noncoding | 29751 | G29751T | G | T | 11 | 11 | AZ.3 | 0.016717 |
noncoding | 29751 | G29751T | G | T | 11 | 11 | B.1.243 | 0.000765 |
noncoding | 29751 | G29751T | G | T | 11 | 11 | B.1.400 | 0.004719 |
noncoding | 29751 | G29751T | G | T | 11 | 11 | B.1.617.1 | 0.001419 |
noncoding | 29751 | G29751T | G | T | 10 | 10 | AY.9 | 0.000676 |
noncoding | 29751 | G29751T | G | T | 10 | 10 | B.1.177.21 | 0.000765 |
noncoding | 29751 | G29751T | G | T | 10 | 10 | P.1.12 | 0.00484 |
noncoding | 29751 | G29751T | G | T | 9 | 9 | B.1.36.8 | 0.009 |
noncoding | 29751 | G29751T | G | T | 8 | 8 | AY.120.1 | 0.002568 |
noncoding | 29751 | G29751T | G | T | 8 | 8 | AY.34 | 0.000776 |
noncoding | 29751 | G29751T | G | T | 8 | 8 | AY.5.3 | 0.002699 |
noncoding | 29751 | G29751T | G | T | 8 | 8 | B.1.1.28 | 0.00249 |
noncoding | 29751 | G29751T | G | T | 8 | 8 | B.1.1.317 | 0.003294 |
noncoding | 29751 | G29751T | G | T | 8 | 8 | B.1.221 | 0.000568 |
noncoding | 29751 | G29751T | G | T | 7 | 7 | AD.2 | 0.001533 |
noncoding | 29751 | G29751T | G | T | 7 | 7 | AY.14 | 0.000616 |
noncoding | 29751 | G29751T | G | T | 7 | 7 | AY.7.2 | 0.003915 |
noncoding | 29751 | G29751T | G | T | 7 | 7 | AY.75.1 | 0.001262 |
noncoding | 29751 | G29751T | G | T | 7 | 7 | B.1.1.128 | 0.049645 |
noncoding | 29751 | G29751T | G | T | 7 | 7 | B.1.1.346 | 0.205882 |
noncoding | 29751 | G29751T | G | T | 7 | 7 | B.1.177.82 | 0.003341 |
noncoding | 29751 | G29751T | G | T | 7 | 7 | B.1.311 | 0.001922 |
noncoding | 29751 | G29751T | G | T | 7 | 7 | P.1.15 | 0.001626 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | AY.36 | 0.000889 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | AY.46.5 | 0.00119 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | AY.65 | 0.003198 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | B.1.1.189 | 0.009077 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | B.1.1.284 | 0.000644 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | B.1.1.318 | 0.001811 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | B.1.1.326 | 0.010563 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | B.1.438.1 | 0.000644 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | B.1.470 | 0.008427 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | C.37 | 0.000696 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | P.1.14 | 0.000287 |
noncoding | 29751 | G29751T | G | T | 6 | 6 | Q.1 | 0.000758 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | AY.106 | 0.001674 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | AY.12 | 0.00158 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | AY.41 | 0.00147 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | AY.45 | 0.000608 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | AY.54 | 0.000477 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | AY.60 | 0.00469 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | AY.92 | 0.001436 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | B | 0.000639 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | B.1.1.33 | 0.002104 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | B.1.177.23 | 0.016181 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | B.1.427 | 0.000252 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | B.1.621.1 | 0.002529 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | C.36 | 0.004554 |
noncoding | 29751 | G29751T | G | T | 5 | 5 | Q.3 | 0.000725 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | AY.116 | 0.001147 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | AY.46.6 | 0.000289 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | AY.68 | 0.001095 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | AY.72 | 0.005442 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | AY.78 | 0.006163 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | AY.9.1 | 0.000335 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | AZ.2 | 0.003284 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | B.1.1.263 | 0.006231 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | B.1.1.312 | 0.007648 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | B.1.177.81 | 0.000757 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | B.1.408 | 0.01476 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | B.1.409 | 0.003125 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | B.1.587 | 0.00759 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | B.1.595 | 0.001044 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | B.1.637 | 0.000292 |
noncoding | 29751 | G29751T | G | T | 4 | 4 | P.1.1 | 0.001271 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | A.1 | 0.000846 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.109 | 0.002219 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.111 | 0.000549 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.19 | 0.003421 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.31 | 0.055556 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.39.1 | 0.000119 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.51 | 0.002727 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.53 | 0.000863 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.70 | 0.000626 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.73 | 0.001996 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | AY.85 | 0.001282 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.1.153 | 0.003286 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.1.176 | 0.001318 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.1.216 | 0.002671 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.1.377 | 0.004144 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.1.416 | 0.002715 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.1.448 | 0.006098 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.1.47 | 0.016043 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.1.50 | 0.002037 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.1.70 | 0.001023 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.177.16 | 0.001993 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.177.4 | 0.000633 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.177.6 | 0.00293 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.258.24 | 0.032258 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | B.1.628 | 0.001057 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | N.5 | 0.0053 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | P.1.17 | 0.000485 |
noncoding | 29751 | G29751T | G | T | 3 | 3 | P.1.4 | 0.00293 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | A | 0.000774 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | A.2.5 | 0.000998 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.16.1 | 0.00094 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.24 | 0.000862 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.27 | 0.000129 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.29.1 | 0.000441 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.4.4 | 0.000818 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.4.5 | 0.000215 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.48 | 0.00093 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.5.2 | 0.004926 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.55 | 0.001835 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.63 | 0.000774 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.69 | 0.000373 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.84 | 0.000875 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.87 | 0.001665 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | AY.99 | 0.002099 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.10 | 0.00223 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.279 | 0.002242 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.291 | 0.001485 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.294 | 0.002532 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.301 | 0.002358 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.311 | 0.000716 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.344 | 0.021505 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.354 | 0.008772 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.369 | 0.000892 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.1.464 | 0.002946 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.160.28 | 0.005848 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.177.17 | 0.001642 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.177.7 | 0.00033 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.177.73 | 0.001133 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.195 | 0.01005 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.240 | 0.000431 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.247 | 0.029851 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.265 | 0.002541 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.305 | 0.004301 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.313 | 0.013158 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.351.3 | 0.001753 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.356 | 0.003454 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.36.1 | 0.002281 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.367 | 0.001585 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.398 | 0.005952 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.456 | 0.006536 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.466.2 | 0.000782 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.532 | 0.012422 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.568 | 0.002222 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.575 | 0.000607 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.609 | 0.000959 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.1.623 | 0.001073 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.39 | 0.004662 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | B.46 | 0.041667 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | C.30 | 0.003454 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | C.35 | 0.001548 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | D.2 | 0.00015 |
noncoding | 29751 | G29751T | G | T | 2 | 2 | P.1.7 | 0.000639 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | 0.055556 | |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AE.8 | 0.000489 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AU.3 | 0.00211 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.1 | 0.000396 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.10 | 0.00053 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.108 | 0.001103 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.110 | 0.000113 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.118 | 0.000063 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.120.2 | 0.001285 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.15 | 0.002222 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.30 | 0.000396 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.37 | 0.000316 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.39.1.1 | 0.000725 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.39.2 | 0.001541 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.4.3 | 0.000842 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.40 | 0.000964 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.46.4 | 0.000165 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.50 | 0.000799 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.58 | 0.000907 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.62 | 0.000436 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.64 | 0.000595 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.8 | 0.000606 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.86 | 0.00083 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.91 | 0.00073 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.95 | 0.000761 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.96 | 0.002075 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | AY.97 | 0.001701 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.1 | 0.000327 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.121 | 0.002427 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.157 | 0.000913 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.163 | 0.007634 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.243 | 0.004082 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.285 | 0.006536 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.289 | 0.002083 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.302 | 0.002075 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.306 | 0.000438 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.31 | 0.066667 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.340 | 0.045455 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.351 | 0.002793 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.368 | 0.003086 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.37 | 0.000193 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.387 | 0.058824 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.39 | 0.00051 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.407 | 0.041667 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.417 | 0.002703 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.432 | 0.001266 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.437 | 0.010417 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.440 | 0.011765 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.5 | 0.008333 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.51 | 0.001718 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.521 | 0.005348 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.54 | 0.003021 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.1.77 | 0.041667 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.111 | 0.001175 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.160.12 | 0.00641 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.160.16 | 0.000929 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.160.30 | 0.002976 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.160.9 | 0.007194 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.18 | 0.00116 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.24 | 0.001295 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.31 | 0.011494 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.33 | 0.001645 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.44 | 0.000519 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.5 | 0.001242 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.54 | 0.000606 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.56 | 0.000668 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.62 | 0.001192 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.63 | 0.002703 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.75 | 0.001041 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.83 | 0.001481 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.177.87 | 0.000728 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.190 | 0.01 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.199 | 0.004132 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.206 | 0.000816 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.210 | 0.002132 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.214 | 0.003663 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.22 | 0.001318 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.221.1 | 0.002907 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.222 | 0.001692 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.23 | 0.006061 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.232 | 0.000537 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.236 | 0.002053 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.239 | 0.001221 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.241 | 0.000812 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.258.11 | 0.000396 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.258.3 | 0.001675 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.289 | 0.00266 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.306 | 0.005714 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.324 | 0.001605 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.336 | 0.002439 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.349 | 0.000715 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.36.10 | 0.004785 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.36.29 | 0.000517 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.36.36 | 0.000602 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.36.37 | 0.002778 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.375 | 0.00082 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.385 | 0.010638 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.397 | 0.004854 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.401 | 0.008197 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.404 | 0.001302 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.441 | 0.009615 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.446 | 0.02 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.462 | 0.007246 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.463 | 0.008065 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.468 | 0.005714 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.478 | 0.011765 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.503 | 0.002488 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.505 | 0.004386 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.517 | 0.000427 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.540 | 0.009709 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.558 | 0.004566 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.564 | 0.000426 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.575.1 | 0.002439 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.589 | 0.007576 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.597 | 0.00463 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.612 | 0.002653 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.620 | 0.000946 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.625 | 0.002353 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.1.8 | 0.001972 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | B.26 | 0.014706 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | C.1 | 0.002392 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | C.14 | 0.004329 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | C.26 | 0.007353 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | N.8 | 0.03125 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | P.1.10 | 0.000269 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | P.1.16 | 0.000374 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | P.2 | 0.000187 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | P.3 | 0.001595 |
noncoding | 29751 | G29751T | G | T | 1 | 1 | Q.2 | 0.000613 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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