CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = noncoding : Mut = G29747-

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
noncoding	29747	G29747-		noncoding	G	-	35433	35433	1	29747-29747

Details of the mutation G29747- within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
noncoding	29747	G29747-	G	-	35433	35433	All	0.006777
noncoding	29747	G29747-	G	-	9402	9402	B.1.526	0.22099
noncoding	29747	G29747-	G	-	5197	5197	B.1.1.7	0.004652
noncoding	29747	G29747-	G	-	3717	3717	B.1.525	0.420618
noncoding	29747	G29747-	G	-	2110	2110	AY.4	0.003284
noncoding	29747	G29747-	G	-	1762	1762	B.1.1.311	0.631089
noncoding	29747	G29747-	G	-	830	830	AY.38	0.414378
noncoding	29747	G29747-	G	-	583	583	B.1.429	0.013717
noncoding	29747	G29747-	G	-	576	576	B.1.617.2	0.002169
noncoding	29747	G29747-	G	-	535	535	B.1.2	0.004711
noncoding	29747	G29747-	G	-	474	474	B.1.160.7	0.985447
noncoding	29747	G29747-	G	-	443	443	B.1	0.004058
noncoding	29747	G29747-	G	-	408	408	B.1.177	0.005372
noncoding	29747	G29747-	G	-	369	369	B.1.177.81	0.06986
noncoding	29747	G29747-	G	-	365	365	B.1.351.2	0.110439
noncoding	29747	G29747-	G	-	322	322	P.1	0.005073
noncoding	29747	G29747-	G	-	308	308	AY.5	0.00636
noncoding	29747	G29747-	G	-	307	307	AY.39	0.007586
noncoding	29747	G29747-	G	-	301	301	AY.25	0.00181
noncoding	29747	G29747-	G	-	286	286	B.1.258.11	0.113357
noncoding	29747	G29747-	G	-	239	239	B.1.1	0.004336
noncoding	29747	G29747-	G	-	235	235	B.1.351	0.006986
noncoding	29747	G29747-	G	-	219	219	B.1.221	0.015556
noncoding	29747	G29747-	G	-	210	210	B.1.160	0.006549
noncoding	29747	G29747-	G	-	207	207	AY.103	0.001285
noncoding	29747	G29747-	G	-	207	207	B.1.160.33	0.915929
noncoding	29747	G29747-	G	-	205	205	B.1.1.519	0.008141
noncoding	29747	G29747-	G	-	179	179	AY.43	0.000793
noncoding	29747	G29747-	G	-	163	163	B.1.626	0.931429
noncoding	29747	G29747-	G	-	155	155	B.1.621	0.01372
noncoding	29747	G29747-	G	-	147	147	B.1.258	0.009782
noncoding	29747	G29747-	G	-	145	145	D.5	0.721393
noncoding	29747	G29747-	G	-	144	144	B.1.427	0.007272
noncoding	29747	G29747-	G	-	141	141	AY.46.6	0.010181
noncoding	29747	G29747-	G	-	125	125	AY.120	0.004647
noncoding	29747	G29747-	G	-	118	118	AY.44	0.000718
noncoding	29747	G29747-	G	-	104	104	B.1.1.294	0.131646
noncoding	29747	G29747-	G	-	100	100	B.1.1.63	0.03858
noncoding	29747	G29747-	G	-	97	97	AY.3	0.000965
noncoding	29747	G29747-	G	-	97	97	AY.42	0.003902
noncoding	29747	G29747-	G	-	96	96	AY.73	0.063872
noncoding	29747	G29747-	G	-	94	94	AY.47	0.002924
noncoding	29747	G29747-	G	-	94	94	B.1.1.222	0.019176
noncoding	29747	G29747-	G	-	84	84	B.1.243	0.005845
noncoding	29747	G29747-	G	-	79	79	B.1.596	0.006884
noncoding	29747	G29747-	G	-	68	68	AY.102	0.001803
noncoding	29747	G29747-	G	-	68	68	AY.9.2	0.002498
noncoding	29747	G29747-	G	-	65	65	B.1.561	0.025804
noncoding	29747	G29747-	G	-	65	65	C.37	0.007544
noncoding	29747	G29747-	G	-	59	59	D.2	0.004427
noncoding	29747	G29747-	G	-	58	58	R.1	0.005221
noncoding	29747	G29747-	G	-	57	57	C.16	0.060445
noncoding	29747	G29747-	G	-	56	56	B.1.241	0.045455
noncoding	29747	G29747-	G	-	53	53	P.1.14	0.002533
noncoding	29747	G29747-	G	-	48	48	AY.4.2	0.001041
noncoding	29747	G29747-	G	-	48	48	B.1.1.434	0.016731
noncoding	29747	G29747-	G	-	47	47	P.1.16	0.017583
noncoding	29747	G29747-	G	-	46	46	B.1.637	0.003361
noncoding	29747	G29747-	G	-	45	45	B.1.240	0.0097
noncoding	29747	G29747-	G	-	45	45	B.1.595	0.011743
noncoding	29747	G29747-	G	-	43	43	B.1.177.24	0.055699
noncoding	29747	G29747-	G	-	41	41	B.1.177.60	0.008956
noncoding	29747	G29747-	G	-	39	39	B.1.36	0.00569
noncoding	29747	G29747-	G	-	38	38	M.1	0.883721
noncoding	29747	G29747-	G	-	36	36	AY.119	0.001271
noncoding	29747	G29747-	G	-	36	36	AY.26	0.001019
noncoding	29747	G29747-	G	-	36	36	AY.29	0.000568
noncoding	29747	G29747-	G	-	34	34	B.1.258.17	0.003535
noncoding	29747	G29747-	G	-	34	34	B.1.304	0.790698
noncoding	29747	G29747-	G	-	33	33	B.1.177.27	0.311321
noncoding	29747	G29747-	G	-	33	33	B.1.243.1	0.733333
noncoding	29747	G29747-	G	-	32	32	B.1.623	0.017167
noncoding	29747	G29747-	G	-	31	31	B.1.36.18	0.013025
noncoding	29747	G29747-	G	-	30	30	B.1.177.62	0.035757
noncoding	29747	G29747-	G	-	29	29	AY.100	0.001334
noncoding	29747	G29747-	G	-	29	29	B.1.619	0.025261
noncoding	29747	G29747-	G	-	27	27	AY.6	0.00111
noncoding	29747	G29747-	G	-	27	27	B.1.346	0.035387
noncoding	29747	G29747-	G	-	25	25	AY.9.1	0.002093
noncoding	29747	G29747-	G	-	24	24	B.1.177.86	0.004403
noncoding	29747	G29747-	G	-	22	22	AY.20	0.000855
noncoding	29747	G29747-	G	-	22	22	AY.45	0.002677
noncoding	29747	G29747-	G	-	22	22	B.1.1.368	0.067901
noncoding	29747	G29747-	G	-	22	22	B.1.1.37	0.004243
noncoding	29747	G29747-	G	-	21	21	B.1.1.39	0.010703
noncoding	29747	G29747-	G	-	21	21	B.1.1.397	0.047297
noncoding	29747	G29747-	G	-	21	21	B.1.305	0.045161
noncoding	29747	G29747-	G	-	20	20	B.1.1.174	0.067568
noncoding	29747	G29747-	G	-	20	20	B.1.1.33	0.008418
noncoding	29747	G29747-	G	-	20	20	B.1.311	0.005491
noncoding	29747	G29747-	G	-	20	20	B.1.576	0.018132
noncoding	29747	G29747-	G	-	20	20	B.1.588	0.018198
noncoding	29747	G29747-	G	-	19	19	AY.92	0.005458
noncoding	29747	G29747-	G	-	19	19	B.1.206	0.015498
noncoding	29747	G29747-	G	-	19	19	B.1.289	0.050532
noncoding	29747	G29747-	G	-	19	19	B.1.404	0.02474
noncoding	29747	G29747-	G	-	19	19	B.1.416.1	0.029687
noncoding	29747	G29747-	G	-	18	18	AY.118	0.001128
noncoding	29747	G29747-	G	-	18	18	B.1.1.172	0.327273
noncoding	29747	G29747-	G	-	18	18	B.1.1.28	0.005602
noncoding	29747	G29747-	G	-	18	18	B.1.1.307	0.04557
noncoding	29747	G29747-	G	-	18	18	B.1.438.1	0.001931
noncoding	29747	G29747-	G	-	18	18	B.1.497	0.005666
noncoding	29747	G29747-	G	-	18	18	B.1.556	0.135338
noncoding	29747	G29747-	G	-	18	18	B.1.562	0.333333
noncoding	29747	G29747-	G	-	18	18	B.1.575	0.005461
noncoding	29747	G29747-	G	-	18	18	P.2	0.003359
noncoding	29747	G29747-	G	-	17	17	B.1.1.153	0.01862
noncoding	29747	G29747-	G	-	17	17	B.1.1.214	0.000943
noncoding	29747	G29747-	G	-	16	16	AY.61	0.001676
noncoding	29747	G29747-	G	-	16	16	B	0.002045
noncoding	29747	G29747-	G	-	16	16	B.1.258.14	0.015686
noncoding	29747	G29747-	G	-	16	16	B.1.36.1	0.018244
noncoding	29747	G29747-	G	-	16	16	Q.1	0.002021
noncoding	29747	G29747-	G	-	15	15	AY.9	0.001014
noncoding	29747	G29747-	G	-	15	15	B.1.177.7	0.002473
noncoding	29747	G29747-	G	-	15	15	B.1.36.29	0.00776
noncoding	29747	G29747-	G	-	14	14	B.1.1.265	0.044164
noncoding	29747	G29747-	G	-	14	14	B.1.1.318	0.004225
noncoding	29747	G29747-	G	-	14	14	P.1.15	0.003253
noncoding	29747	G29747-	G	-	13	13	AY.74	0.001503
noncoding	29747	G29747-	G	-	13	13	AY.75.1	0.002344
noncoding	29747	G29747-	G	-	13	13	AY.98.1	0.00063
noncoding	29747	G29747-	G	-	13	13	AY.99.2	0.001198
noncoding	29747	G29747-	G	-	13	13	B.1.1.25	0.007391
noncoding	29747	G29747-	G	-	13	13	B.1.1.317	0.005352
noncoding	29747	G29747-	G	-	13	13	B.1.416	0.016497
noncoding	29747	G29747-	G	-	13	13	B.1.581	0.122642
noncoding	29747	G29747-	G	-	12	12	AY.75	0.000672
noncoding	29747	G29747-	G	-	12	12	B.1.1.306	0.005261
noncoding	29747	G29747-	G	-	12	12	B.1.1.416	0.01086
noncoding	29747	G29747-	G	-	12	12	B.1.110.3	0.008621
noncoding	29747	G29747-	G	-	12	12	B.1.177.6	0.011719
noncoding	29747	G29747-	G	-	12	12	B.1.177.75	0.012487
noncoding	29747	G29747-	G	-	12	12	B.1.400	0.005148
noncoding	29747	G29747-	G	-	11	11	A.1	0.0031
noncoding	29747	G29747-	G	-	11	11	AY.117	0.00093
noncoding	29747	G29747-	G	-	11	11	AY.23	0.000767
noncoding	29747	G29747-	G	-	11	11	B.1.234	0.001451
noncoding	29747	G29747-	G	-	10	10	AY.114	0.002311
noncoding	29747	G29747-	G	-	10	10	AY.2	0.003561
noncoding	29747	G29747-	G	-	10	10	AY.46	0.001041
noncoding	29747	G29747-	G	-	10	10	AY.46.4	0.001645
noncoding	29747	G29747-	G	-	10	10	B.1.466.2	0.003912
noncoding	29747	G29747-	G	-	10	10	P.1.4	0.009766
noncoding	29747	G29747-	G	-	10	10	P.1.7	0.003193
noncoding	29747	G29747-	G	-	9	9	AY.12	0.002845
noncoding	29747	G29747-	G	-	9	9	AY.13	0.001449
noncoding	29747	G29747-	G	-	9	9	AY.34.1	0.004589
noncoding	29747	G29747-	G	-	9	9	AY.46.5	0.001786
noncoding	29747	G29747-	G	-	9	9	AY.54	0.000858
noncoding	29747	G29747-	G	-	9	9	AY.85	0.003845
noncoding	29747	G29747-	G	-	9	9	B.1.1.1	0.00294
noncoding	29747	G29747-	G	-	9	9	B.1.1.316	0.008326
noncoding	29747	G29747-	G	-	9	9	B.1.149	0.030822
noncoding	29747	G29747-	G	-	9	9	B.1.160.14	0.019068
noncoding	29747	G29747-	G	-	9	9	B.1.177.50	0.042254
noncoding	29747	G29747-	G	-	9	9	B.1.258.3	0.015075
noncoding	29747	G29747-	G	-	9	9	B.1.398	0.026786
noncoding	29747	G29747-	G	-	9	9	B.1.599	0.032847
noncoding	29747	G29747-	G	-	9	9	C.36.3	0.005105
noncoding	29747	G29747-	G	-	9	9	N.5	0.015901
noncoding	29747	G29747-	G	-	8	8	A	0.003096
noncoding	29747	G29747-	G	-	8	8	AY.34	0.000776
noncoding	29747	G29747-	G	-	8	8	AY.84	0.0035
noncoding	29747	G29747-	G	-	8	8	B.1.36.22	0.009662
noncoding	29747	G29747-	G	-	8	8	B.1.422	0.006499
noncoding	29747	G29747-	G	-	8	8	B.1.93	0.00747
noncoding	29747	G29747-	G	-	8	8	B.40	0.002914
noncoding	29747	G29747-	G	-	8	8	P.1.1	0.002541
noncoding	29747	G29747-	G	-	8	8	P.3	0.012759
noncoding	29747	G29747-	G	-	7	7	AY.91	0.005113
noncoding	29747	G29747-	G	-	7	7	B.1.1.526	0.024823
noncoding	29747	G29747-	G	-	7	7	B.1.177.73	0.003964
noncoding	29747	G29747-	G	-	7	7	B.1.369	0.001997
noncoding	29747	G29747-	G	-	7	7	Q.4	0.003183
noncoding	29747	G29747-	G	-	6	6	AY.14	0.000528
noncoding	29747	G29747-	G	-	6	6	AY.35	0.001398
noncoding	29747	G29747-	G	-	6	6	AY.65	0.003198
noncoding	29747	G29747-	G	-	6	6	B.1.1.464	0.008837
noncoding	29747	G29747-	G	-	6	6	B.1.177.12	0.00091
noncoding	29747	G29747-	G	-	6	6	B.1.177.87	0.004367
noncoding	29747	G29747-	G	-	6	6	B.1.389	0.006012
noncoding	29747	G29747-	G	-	6	6	B.1.609	0.002876
noncoding	29747	G29747-	G	-	6	6	B.39	0.013986
noncoding	29747	G29747-	G	-	6	6	N.4	0.025532
noncoding	29747	G29747-	G	-	6	6	Q.2	0.003681
noncoding	29747	G29747-	G	-	5	5	AY.36	0.000741
noncoding	29747	G29747-	G	-	5	5	AY.71	0.002375
noncoding	29747	G29747-	G	-	5	5	B.1.1.189	0.007564
noncoding	29747	G29747-	G	-	5	5	B.1.1.192	0.011547
noncoding	29747	G29747-	G	-	5	5	B.1.1.198	0.007342
noncoding	29747	G29747-	G	-	5	5	B.1.1.288	0.009579
noncoding	29747	G29747-	G	-	5	5	B.1.1.312	0.00956
noncoding	29747	G29747-	G	-	5	5	B.1.1.369	0.002231
noncoding	29747	G29747-	G	-	5	5	B.1.177.32	0.006748
noncoding	29747	G29747-	G	-	5	5	B.1.210	0.010661
noncoding	29747	G29747-	G	-	5	5	B.1.279	0.002568
noncoding	29747	G29747-	G	-	5	5	B.1.517	0.002135
noncoding	29747	G29747-	G	-	5	5	B.1.628	0.001762
noncoding	29747	G29747-	G	-	5	5	P.1.12	0.00242
noncoding	29747	G29747-	G	-	5	5	P.1.17	0.000809
noncoding	29747	G29747-	G	-	5	5	P.5	0.068493
noncoding	29747	G29747-	G	-	4	4	A.2.5	0.001996
noncoding	29747	G29747-	G	-	4	4	AY.109	0.002959
noncoding	29747	G29747-	G	-	4	4	AY.3.1	0.000341
noncoding	29747	G29747-	G	-	4	4	AY.30	0.001583
noncoding	29747	G29747-	G	-	4	4	AY.59	0.002119
noncoding	29747	G29747-	G	-	4	4	B.1.1.337	0.014388
noncoding	29747	G29747-	G	-	4	4	B.1.1.348	0.003185
noncoding	29747	G29747-	G	-	4	4	B.1.1.41	0.025316
noncoding	29747	G29747-	G	-	4	4	B.1.1.46	0.017467
noncoding	29747	G29747-	G	-	4	4	B.1.1.462	0.034483
noncoding	29747	G29747-	G	-	4	4	B.1.177.18	0.00464
noncoding	29747	G29747-	G	-	4	4	B.1.177.42	0.003578
noncoding	29747	G29747-	G	-	4	4	B.1.177.56	0.00267
noncoding	29747	G29747-	G	-	4	4	B.1.258.16	0.006547
noncoding	29747	G29747-	G	-	4	4	B.1.349	0.002859
noncoding	29747	G29747-	G	-	4	4	B.1.351.3	0.003506
noncoding	29747	G29747-	G	-	4	4	B.1.36.16	0.005698
noncoding	29747	G29747-	G	-	4	4	B.1.399	0.007737
noncoding	29747	G29747-	G	-	4	4	B.1.469	0.01444
noncoding	29747	G29747-	G	-	4	4	B.1.568	0.004444
noncoding	29747	G29747-	G	-	4	4	B.1.582	0.001963
noncoding	29747	G29747-	G	-	4	4	P.1.10	0.001078
noncoding	29747	G29747-	G	-	4	4	Q.8	0.00066
noncoding	29747	G29747-	G	-	3	3	A.2.3	0.014218
noncoding	29747	G29747-	G	-	3	3	AY.110	0.000338
noncoding	29747	G29747-	G	-	3	3	AY.111	0.000549
noncoding	29747	G29747-	G	-	3	3	AY.24	0.001293
noncoding	29747	G29747-	G	-	3	3	AY.27	0.000194
noncoding	29747	G29747-	G	-	3	3	AY.32	0.001597
noncoding	29747	G29747-	G	-	3	3	AY.33	0.0002
noncoding	29747	G29747-	G	-	3	3	AY.39.1	0.000119
noncoding	29747	G29747-	G	-	3	3	AY.40	0.002893
noncoding	29747	G29747-	G	-	3	3	AY.5.3	0.001012
noncoding	29747	G29747-	G	-	3	3	AY.51	0.002727
noncoding	29747	G29747-	G	-	3	3	AY.62	0.001307
noncoding	29747	G29747-	G	-	3	3	AY.7	0.000588
noncoding	29747	G29747-	G	-	3	3	B.1.1.135	0.014085
noncoding	29747	G29747-	G	-	3	3	B.1.1.228	0.009146
noncoding	29747	G29747-	G	-	3	3	B.1.1.236	0.02069
noncoding	29747	G29747-	G	-	3	3	B.1.1.277	0.002276
noncoding	29747	G29747-	G	-	3	3	B.1.1.284	0.000322
noncoding	29747	G29747-	G	-	3	3	B.1.1.372	0.002066
noncoding	29747	G29747-	G	-	3	3	B.1.1.375	0.035714
noncoding	29747	G29747-	G	-	3	3	B.1.1.401	0.2
noncoding	29747	G29747-	G	-	3	3	B.1.1.428	0.028302
noncoding	29747	G29747-	G	-	3	3	B.1.1.466	0.026087
noncoding	29747	G29747-	G	-	3	3	B.1.1.518	0.018987
noncoding	29747	G29747-	G	-	3	3	B.1.1.57	0.034483
noncoding	29747	G29747-	G	-	3	3	B.1.1.70	0.001023
noncoding	29747	G29747-	G	-	3	3	B.1.111	0.003525
noncoding	29747	G29747-	G	-	3	3	B.1.126	0.003827
noncoding	29747	G29747-	G	-	3	3	B.1.145	0.157895
noncoding	29747	G29747-	G	-	3	3	B.1.160.24	0.013274
noncoding	29747	G29747-	G	-	3	3	B.1.177.15	0.001893
noncoding	29747	G29747-	G	-	3	3	B.1.177.21	0.000229
noncoding	29747	G29747-	G	-	3	3	B.1.177.37	0.081081
noncoding	29747	G29747-	G	-	3	3	B.1.177.44	0.001557
noncoding	29747	G29747-	G	-	3	3	B.1.177.55	0.006993
noncoding	29747	G29747-	G	-	3	3	B.1.229	0.029126
noncoding	29747	G29747-	G	-	3	3	B.1.258.21	0.023256
noncoding	29747	G29747-	G	-	3	3	B.1.356	0.005181
noncoding	29747	G29747-	G	-	3	3	B.1.36.17	0.001482
noncoding	29747	G29747-	G	-	3	3	B.1.36.31	0.005254
noncoding	29747	G29747-	G	-	3	3	B.1.396	0.002117
noncoding	29747	G29747-	G	-	3	3	B.1.409	0.002344
noncoding	29747	G29747-	G	-	3	3	B.1.44	0.025
noncoding	29747	G29747-	G	-	3	3	B.1.441	0.028846
noncoding	29747	G29747-	G	-	3	3	B.1.505	0.013158
noncoding	29747	G29747-	G	-	3	3	B.1.560	0.013889
noncoding	29747	G29747-	G	-	3	3	B.1.565	0.002431
noncoding	29747	G29747-	G	-	3	3	B.1.577	0.002062
noncoding	29747	G29747-	G	-	3	3	B.1.590	0.013636
noncoding	29747	G29747-	G	-	3	3	B.1.627	0.006061
noncoding	29747	G29747-	G	-	3	3	B.1.9.4	0.018405
noncoding	29747	G29747-	G	-	2	2	A.23.1	0.001408
noncoding	29747	G29747-	G	-	2	2	AA.1	0.014493
noncoding	29747	G29747-	G	-	2	2	AD.2	0.000438
noncoding	29747	G29747-	G	-	2	2	AN.1	0.04
noncoding	29747	G29747-	G	-	2	2	AY.106	0.00067
noncoding	29747	G29747-	G	-	2	2	AY.16	0.000759
noncoding	29747	G29747-	G	-	2	2	AY.19	0.002281
noncoding	29747	G29747-	G	-	2	2	AY.46.2	0.001271
noncoding	29747	G29747-	G	-	2	2	AY.46.3	0.001867
noncoding	29747	G29747-	G	-	2	2	AY.52	0.001629
noncoding	29747	G29747-	G	-	2	2	AY.56	0.00321
noncoding	29747	G29747-	G	-	2	2	AY.94	0.000885
noncoding	29747	G29747-	G	-	2	2	AY.95	0.001522
noncoding	29747	G29747-	G	-	2	2	AY.98	0.000158
noncoding	29747	G29747-	G	-	2	2	AZ.2	0.001642
noncoding	29747	G29747-	G	-	2	2	B.1.1.161	0.007067
noncoding	29747	G29747-	G	-	2	2	B.1.1.170	0.002494
noncoding	29747	G29747-	G	-	2	2	B.1.1.216	0.001781
noncoding	29747	G29747-	G	-	2	2	B.1.1.218	0.015385
noncoding	29747	G29747-	G	-	2	2	B.1.1.275	0.022472
noncoding	29747	G29747-	G	-	2	2	B.1.1.289	0.004167
noncoding	29747	G29747-	G	-	2	2	B.1.1.303	0.005525
noncoding	29747	G29747-	G	-	2	2	B.1.1.305	0.007722
noncoding	29747	G29747-	G	-	2	2	B.1.1.343	0.041667
noncoding	29747	G29747-	G	-	2	2	B.1.1.345	0.086957
noncoding	29747	G29747-	G	-	2	2	B.1.1.354	0.008772
noncoding	29747	G29747-	G	-	2	2	B.1.1.376	0.011905
noncoding	29747	G29747-	G	-	2	2	B.1.1.389	0.012121
noncoding	29747	G29747-	G	-	2	2	B.1.1.409	0.005666
noncoding	29747	G29747-	G	-	2	2	B.1.1.432	0.002532
noncoding	29747	G29747-	G	-	2	2	B.1.1.50	0.001358
noncoding	29747	G29747-	G	-	2	2	B.1.1.521	0.010695
noncoding	29747	G29747-	G	-	2	2	B.1.1.528	0.009615
noncoding	29747	G29747-	G	-	2	2	B.1.1.71	0.012121
noncoding	29747	G29747-	G	-	2	2	B.1.110	0.00905
noncoding	29747	G29747-	G	-	2	2	B.1.160.32	0.008584
noncoding	29747	G29747-	G	-	2	2	B.1.177.10	0.001756
noncoding	29747	G29747-	G	-	2	2	B.1.177.4	0.000422
noncoding	29747	G29747-	G	-	2	2	B.1.177.5	0.002484
noncoding	29747	G29747-	G	-	2	2	B.1.177.57	0.000562
noncoding	29747	G29747-	G	-	2	2	B.1.177.77	0.001452
noncoding	29747	G29747-	G	-	2	2	B.1.177.78	0.019417
noncoding	29747	G29747-	G	-	2	2	B.1.177.82	0.000955
noncoding	29747	G29747-	G	-	2	2	B.1.189	0.008584
noncoding	29747	G29747-	G	-	2	2	B.1.195	0.01005
noncoding	29747	G29747-	G	-	2	2	B.1.214.2	0.001199
noncoding	29747	G29747-	G	-	2	2	B.1.23	0.012121
noncoding	29747	G29747-	G	-	2	2	B.1.258.10	0.022727
noncoding	29747	G29747-	G	-	2	2	B.1.298	0.004228
noncoding	29747	G29747-	G	-	2	2	B.1.301	0.011834
noncoding	29747	G29747-	G	-	2	2	B.1.319	0.006098
noncoding	29747	G29747-	G	-	2	2	B.1.320	0.002491
noncoding	29747	G29747-	G	-	2	2	B.1.350	0.005865
noncoding	29747	G29747-	G	-	2	2	B.1.36.10	0.009569
noncoding	29747	G29747-	G	-	2	2	B.1.36.26	0.005714
noncoding	29747	G29747-	G	-	2	2	B.1.36.8	0.002
noncoding	29747	G29747-	G	-	2	2	B.1.361	0.002577
noncoding	29747	G29747-	G	-	2	2	B.1.362	0.003082
noncoding	29747	G29747-	G	-	2	2	B.1.391	0.002255
noncoding	29747	G29747-	G	-	2	2	B.1.425	0.005988
noncoding	29747	G29747-	G	-	2	2	B.1.436	0.002058
noncoding	29747	G29747-	G	-	2	2	B.1.470	0.002809
noncoding	29747	G29747-	G	-	2	2	B.1.499	0.002101
noncoding	29747	G29747-	G	-	2	2	B.1.503	0.004975
noncoding	29747	G29747-	G	-	2	2	B.1.509	0.001732
noncoding	29747	G29747-	G	-	2	2	B.1.543	0.02
noncoding	29747	G29747-	G	-	2	2	B.1.551	0.002581
noncoding	29747	G29747-	G	-	2	2	B.1.567	0.006667
noncoding	29747	G29747-	G	-	2	2	B.1.575.1	0.004878
noncoding	29747	G29747-	G	-	2	2	B.1.617.1	0.000258
noncoding	29747	G29747-	G	-	2	2	B.1.620	0.001892
noncoding	29747	G29747-	G	-	2	2	B.3.1	0.003317
noncoding	29747	G29747-	G	-	2	2	B.36	0.153846
noncoding	29747	G29747-	G	-	2	2	C.38	0.016129
noncoding	29747	G29747-	G	-	2	2	P.1.13	0.001797
noncoding	29747	G29747-	G	-	2	2	P.6	0.006289
noncoding	29747	G29747-	G	-	1	1	A.2	0.000662
noncoding	29747	G29747-	G	-	1	1	A.21	0.00277
noncoding	29747	G29747-	G	-	1	1	A.27	0.001656
noncoding	29747	G29747-	G	-	1	1	AH.2	0.012048
noncoding	29747	G29747-	G	-	1	1	AK.2	0.045455
noncoding	29747	G29747-	G	-	1	1	AT.1	0.005128
noncoding	29747	G29747-	G	-	1	1	AU.1	0.001266
noncoding	29747	G29747-	G	-	1	1	AU.3	0.00211
noncoding	29747	G29747-	G	-	1	1	AY.10	0.00053
noncoding	29747	G29747-	G	-	1	1	AY.105	0.000643
noncoding	29747	G29747-	G	-	1	1	AY.108	0.001103
noncoding	29747	G29747-	G	-	1	1	AY.116.1	0.000311
noncoding	29747	G29747-	G	-	1	1	AY.120.1	0.000321
noncoding	29747	G29747-	G	-	1	1	AY.120.2.1	0.000498
noncoding	29747	G29747-	G	-	1	1	AY.29.1	0.000221
noncoding	29747	G29747-	G	-	1	1	AY.4.2.1	0.000149
noncoding	29747	G29747-	G	-	1	1	AY.4.5	0.000107
noncoding	29747	G29747-	G	-	1	1	AY.48	0.000465
noncoding	29747	G29747-	G	-	1	1	AY.53	0.000288
noncoding	29747	G29747-	G	-	1	1	AY.55	0.000917
noncoding	29747	G29747-	G	-	1	1	AY.66	0.00107
noncoding	29747	G29747-	G	-	1	1	AY.81	0.001992
noncoding	29747	G29747-	G	-	1	1	AY.87	0.000833
noncoding	29747	G29747-	G	-	1	1	AY.88	0.000884
noncoding	29747	G29747-	G	-	1	1	AZ.1	0.000867
noncoding	29747	G29747-	G	-	1	1	B.1.1.10	0.001115
noncoding	29747	G29747-	G	-	1	1	B.1.1.139	0.022727
noncoding	29747	G29747-	G	-	1	1	B.1.1.154	0.04
noncoding	29747	G29747-	G	-	1	1	B.1.1.186	0.003436
noncoding	29747	G29747-	G	-	1	1	B.1.1.196	0.005714
noncoding	29747	G29747-	G	-	1	1	B.1.1.197	0.037037
noncoding	29747	G29747-	G	-	1	1	B.1.1.205	0.003717
noncoding	29747	G29747-	G	-	1	1	B.1.1.220	0.001859
noncoding	29747	G29747-	G	-	1	1	B.1.1.227	0.004348
noncoding	29747	G29747-	G	-	1	1	B.1.1.229	0.005747
noncoding	29747	G29747-	G	-	1	1	B.1.1.241	0.00207
noncoding	29747	G29747-	G	-	1	1	B.1.1.263	0.001558
noncoding	29747	G29747-	G	-	1	1	B.1.1.286	0.002899
noncoding	29747	G29747-	G	-	1	1	B.1.1.297	0.002237
noncoding	29747	G29747-	G	-	1	1	B.1.1.298	0.000862
noncoding	29747	G29747-	G	-	1	1	B.1.1.327	0.1
noncoding	29747	G29747-	G	-	1	1	B.1.1.336	0.016667
noncoding	29747	G29747-	G	-	1	1	B.1.1.352	0.03125
noncoding	29747	G29747-	G	-	1	1	B.1.1.362	0.005618
noncoding	29747	G29747-	G	-	1	1	B.1.1.387	0.058824
noncoding	29747	G29747-	G	-	1	1	B.1.1.398	0.003226
noncoding	29747	G29747-	G	-	1	1	B.1.1.413	0.006897
noncoding	29747	G29747-	G	-	1	1	B.1.1.420	0.001006
noncoding	29747	G29747-	G	-	1	1	B.1.1.433	0.001425
noncoding	29747	G29747-	G	-	1	1	B.1.1.47	0.005348
noncoding	29747	G29747-	G	-	1	1	B.1.1.517	0.006803
noncoding	29747	G29747-	G	-	1	1	B.1.1.8	0.003584
noncoding	29747	G29747-	G	-	1	1	B.1.104	0.00369
noncoding	29747	G29747-	G	-	1	1	B.1.12	0.008
noncoding	29747	G29747-	G	-	1	1	B.1.139	0.000733
noncoding	29747	G29747-	G	-	1	1	B.1.159	0.012195
noncoding	29747	G29747-	G	-	1	1	B.1.160.15	0.00495
noncoding	29747	G29747-	G	-	1	1	B.1.160.27	0.015152
noncoding	29747	G29747-	G	-	1	1	B.1.162	0.005025
noncoding	29747	G29747-	G	-	1	1	B.1.167	0.007812
noncoding	29747	G29747-	G	-	1	1	B.1.170	0.00431
noncoding	29747	G29747-	G	-	1	1	B.1.177.23	0.003236
noncoding	29747	G29747-	G	-	1	1	B.1.177.30	0.002513
noncoding	29747	G29747-	G	-	1	1	B.1.177.35	0.000691
noncoding	29747	G29747-	G	-	1	1	B.1.177.46	0.000918
noncoding	29747	G29747-	G	-	1	1	B.1.177.51	0.004566
noncoding	29747	G29747-	G	-	1	1	B.1.177.53	0.002392
noncoding	29747	G29747-	G	-	1	1	B.1.177.65	0.000665
noncoding	29747	G29747-	G	-	1	1	B.1.177.79	0.002342
noncoding	29747	G29747-	G	-	1	1	B.1.177.8	0.000752
noncoding	29747	G29747-	G	-	1	1	B.1.177.9	0.001332
noncoding	29747	G29747-	G	-	1	1	B.1.178	0.02381
noncoding	29747	G29747-	G	-	1	1	B.1.180	0.05
noncoding	29747	G29747-	G	-	1	1	B.1.181	0.019608
noncoding	29747	G29747-	G	-	1	1	B.1.190	0.01
noncoding	29747	G29747-	G	-	1	1	B.1.192	0.009259
noncoding	29747	G29747-	G	-	1	1	B.1.219	0.009434
noncoding	29747	G29747-	G	-	1	1	B.1.221.4	0.004167
noncoding	29747	G29747-	G	-	1	1	B.1.222	0.001692
noncoding	29747	G29747-	G	-	1	1	B.1.232	0.000537
noncoding	29747	G29747-	G	-	1	1	B.1.237	0.004975
noncoding	29747	G29747-	G	-	1	1	B.1.239	0.001221
noncoding	29747	G29747-	G	-	1	1	B.1.258.24	0.010753
noncoding	29747	G29747-	G	-	1	1	B.1.265	0.001271
noncoding	29747	G29747-	G	-	1	1	B.1.291	0.019231
noncoding	29747	G29747-	G	-	1	1	B.1.3	0.002618
noncoding	29747	G29747-	G	-	1	1	B.1.332	0.003497
noncoding	29747	G29747-	G	-	1	1	B.1.336	0.002439
noncoding	29747	G29747-	G	-	1	1	B.1.337	0.005587
noncoding	29747	G29747-	G	-	1	1	B.1.359	0.022727
noncoding	29747	G29747-	G	-	1	1	B.1.36.19	0.009259
noncoding	29747	G29747-	G	-	1	1	B.1.36.36	0.000602
noncoding	29747	G29747-	G	-	1	1	B.1.36.38	0.001642
noncoding	29747	G29747-	G	-	1	1	B.1.375	0.00082
noncoding	29747	G29747-	G	-	1	1	B.1.390	0.010638
noncoding	29747	G29747-	G	-	1	1	B.1.395	0.007042
noncoding	29747	G29747-	G	-	1	1	B.1.420	0.010417
noncoding	29747	G29747-	G	-	1	1	B.1.424	0.008065
noncoding	29747	G29747-	G	-	1	1	B.1.428.3	0.012821
noncoding	29747	G29747-	G	-	1	1	B.1.433	0.003195
noncoding	29747	G29747-	G	-	1	1	B.1.443	0.004673
noncoding	29747	G29747-	G	-	1	1	B.1.478	0.011765
noncoding	29747	G29747-	G	-	1	1	B.1.493	0.025641
noncoding	29747	G29747-	G	-	1	1	B.1.508	0.025641
noncoding	29747	G29747-	G	-	1	1	B.1.524	0.001406
noncoding	29747	G29747-	G	-	1	1	B.1.530	0.007143
noncoding	29747	G29747-	G	-	1	1	B.1.539	0.017544
noncoding	29747	G29747-	G	-	1	1	B.1.540	0.009709
noncoding	29747	G29747-	G	-	1	1	B.1.547	0.02439
noncoding	29747	G29747-	G	-	1	1	B.1.558	0.004566
noncoding	29747	G29747-	G	-	1	1	B.1.564	0.000426
noncoding	29747	G29747-	G	-	1	1	B.1.564.1	0.001577
noncoding	29747	G29747-	G	-	1	1	B.1.580	0.004065
noncoding	29747	G29747-	G	-	1	1	B.1.595.1	0.005848
noncoding	29747	G29747-	G	-	1	1	B.1.597	0.00463
noncoding	29747	G29747-	G	-	1	1	B.1.6	0.017241
noncoding	29747	G29747-	G	-	1	1	B.1.600	0.005848
noncoding	29747	G29747-	G	-	1	1	B.1.617.3	0.002985
noncoding	29747	G29747-	G	-	1	1	B.1.621.1	0.000506
noncoding	29747	G29747-	G	-	1	1	B.1.630	0.005236
noncoding	29747	G29747-	G	-	1	1	B.1.631	0.003367
noncoding	29747	G29747-	G	-	1	1	B.1.81	0.021277
noncoding	29747	G29747-	G	-	1	1	B.10	0.008264
noncoding	29747	G29747-	G	-	1	1	B.28	0.003279
noncoding	29747	G29747-	G	-	1	1	B.3	0.000831
noncoding	29747	G29747-	G	-	1	1	B.31	0.003731
noncoding	29747	G29747-	G	-	1	1	B.4.2	0.066667
noncoding	29747	G29747-	G	-	1	1	B.55	0.00295
noncoding	29747	G29747-	G	-	1	1	B.58	0.010204
noncoding	29747	G29747-	G	-	1	1	B.6	0.00091
noncoding	29747	G29747-	G	-	1	1	B.6.6	0.000889
noncoding	29747	G29747-	G	-	1	1	C.1	0.002392
noncoding	29747	G29747-	G	-	1	1	C.1.2	0.004255
noncoding	29747	G29747-	G	-	1	1	C.18	0.002591
noncoding	29747	G29747-	G	-	1	1	C.35	0.000774
noncoding	29747	G29747-	G	-	1	1	C.36	0.000911
noncoding	29747	G29747-	G	-	1	1	L.3	0.003546
noncoding	29747	G29747-	G	-	1	1	N.6	0.007092
noncoding	29747	G29747-	G	-	1	1	P.1.11	0.010204
noncoding	29747	G29747-	G	-	1	1	P.1.2	0.001156
noncoding	29747	G29747-	G	-	1	1	P.7	0.004367
noncoding	29747	G29747-	G	-	1	1	Q.3	0.000145
noncoding	29747	G29747-	G	-	1	1	Q.7	0.001111
noncoding	29747	G29747-	G	-	1	1	U.3	0.003861
noncoding	29747	G29747-	G	-	1	1	W.1	0.008696
noncoding	29747	G29747-	G	-	1	1	W.4	0.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.