CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 29737 | G29737- | noncoding | G | - | 19804 | 19804 | 1 | 29737-29737 |
Details of the mutation G29737- within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 29737 | G29737- | G | - | 19804 | 19804 | All | 0.003788 |
noncoding | 29737 | G29737- | G | - | 3716 | 3716 | B.1.525 | 0.420505 |
noncoding | 29737 | G29737- | G | - | 3547 | 3547 | B.1.1.7 | 0.003175 |
noncoding | 29737 | G29737- | G | - | 1955 | 1955 | AY.4 | 0.003043 |
noncoding | 29737 | G29737- | G | - | 1762 | 1762 | B.1.1.311 | 0.631089 |
noncoding | 29737 | G29737- | G | - | 832 | 832 | AY.38 | 0.415377 |
noncoding | 29737 | G29737- | G | - | 523 | 523 | B.1.617.2 | 0.001969 |
noncoding | 29737 | G29737- | G | - | 421 | 421 | B.1.429 | 0.009906 |
noncoding | 29737 | G29737- | G | - | 365 | 365 | B.1.351.2 | 0.110439 |
noncoding | 29737 | G29737- | G | - | 308 | 308 | B.1 | 0.002821 |
noncoding | 29737 | G29737- | G | - | 304 | 304 | AY.39 | 0.007512 |
noncoding | 29737 | G29737- | G | - | 286 | 286 | AY.5 | 0.005906 |
noncoding | 29737 | G29737- | G | - | 286 | 286 | B.1.258.11 | 0.113357 |
noncoding | 29737 | G29737- | G | - | 267 | 267 | B.1.526 | 0.006276 |
noncoding | 29737 | G29737- | G | - | 235 | 235 | B.1.497 | 0.073969 |
noncoding | 29737 | G29737- | G | - | 215 | 215 | B.1.2 | 0.001893 |
noncoding | 29737 | G29737- | G | - | 209 | 209 | B.1.177 | 0.002752 |
noncoding | 29737 | G29737- | G | - | 208 | 208 | P.1 | 0.003277 |
noncoding | 29737 | G29737- | G | - | 185 | 185 | AY.103 | 0.001149 |
noncoding | 29737 | G29737- | G | - | 185 | 185 | B.1.160 | 0.00577 |
noncoding | 29737 | G29737- | G | - | 162 | 162 | B.1.351 | 0.004816 |
noncoding | 29737 | G29737- | G | - | 155 | 155 | AY.25 | 0.000932 |
noncoding | 29737 | G29737- | G | - | 152 | 152 | AY.43 | 0.000673 |
noncoding | 29737 | G29737- | G | - | 145 | 145 | AY.46.6 | 0.01047 |
noncoding | 29737 | G29737- | G | - | 144 | 144 | B.1.1 | 0.002612 |
noncoding | 29737 | G29737- | G | - | 113 | 113 | AY.120 | 0.004201 |
noncoding | 29737 | G29737- | G | - | 107 | 107 | AY.44 | 0.000651 |
noncoding | 29737 | G29737- | G | - | 103 | 103 | B.1.221 | 0.007316 |
noncoding | 29737 | G29737- | G | - | 102 | 102 | AY.42 | 0.004103 |
noncoding | 29737 | G29737- | G | - | 101 | 101 | B.1.1.294 | 0.127848 |
noncoding | 29737 | G29737- | G | - | 98 | 98 | B.1.258 | 0.006522 |
noncoding | 29737 | G29737- | G | - | 97 | 97 | AY.47 | 0.003017 |
noncoding | 29737 | G29737- | G | - | 96 | 96 | AY.73 | 0.063872 |
noncoding | 29737 | G29737- | G | - | 88 | 88 | AY.3 | 0.000875 |
noncoding | 29737 | G29737- | G | - | 87 | 87 | B.1.177.81 | 0.016471 |
noncoding | 29737 | G29737- | G | - | 79 | 79 | B.1.1.519 | 0.003137 |
noncoding | 29737 | G29737- | G | - | 53 | 53 | B.1.243 | 0.003688 |
noncoding | 29737 | G29737- | G | - | 47 | 47 | AY.20 | 0.001827 |
noncoding | 29737 | G29737- | G | - | 47 | 47 | C.16 | 0.049841 |
noncoding | 29737 | G29737- | G | - | 44 | 44 | B.1.177.24 | 0.056995 |
noncoding | 29737 | G29737- | G | - | 42 | 42 | P.1.16 | 0.015713 |
noncoding | 29737 | G29737- | G | - | 41 | 41 | AY.102 | 0.001087 |
noncoding | 29737 | G29737- | G | - | 40 | 40 | B.1.427 | 0.00202 |
noncoding | 29737 | G29737- | G | - | 39 | 39 | B.1.258.17 | 0.004055 |
noncoding | 29737 | G29737- | G | - | 39 | 39 | R.1 | 0.00351 |
noncoding | 29737 | G29737- | G | - | 35 | 35 | AY.29 | 0.000552 |
noncoding | 29737 | G29737- | G | - | 34 | 34 | AY.119 | 0.0012 |
noncoding | 29737 | G29737- | G | - | 32 | 32 | AY.26 | 0.000906 |
noncoding | 29737 | G29737- | G | - | 32 | 32 | M.1 | 0.744186 |
noncoding | 29737 | G29737- | G | - | 29 | 29 | AY.100 | 0.001334 |
noncoding | 29737 | G29737- | G | - | 29 | 29 | AY.4.2 | 0.000629 |
noncoding | 29737 | G29737- | G | - | 28 | 28 | P.1.14 | 0.001338 |
noncoding | 29737 | G29737- | G | - | 27 | 27 | B.1.346 | 0.035387 |
noncoding | 29737 | G29737- | G | - | 26 | 26 | AY.6 | 0.001069 |
noncoding | 29737 | G29737- | G | - | 26 | 26 | B.1.1.37 | 0.005014 |
noncoding | 29737 | G29737- | G | - | 26 | 26 | B.1.595 | 0.006785 |
noncoding | 29737 | G29737- | G | - | 23 | 23 | C.37 | 0.002669 |
noncoding | 29737 | G29737- | G | - | 22 | 22 | B.1.1.368 | 0.067901 |
noncoding | 29737 | G29737- | G | - | 22 | 22 | B.1.596 | 0.001917 |
noncoding | 29737 | G29737- | G | - | 22 | 22 | B.1.621 | 0.001947 |
noncoding | 29737 | G29737- | G | - | 21 | 21 | B.1.1.222 | 0.004284 |
noncoding | 29737 | G29737- | G | - | 21 | 21 | B.1.305 | 0.045161 |
noncoding | 29737 | G29737- | G | - | 20 | 20 | B.1.1.265 | 0.063091 |
noncoding | 29737 | G29737- | G | - | 20 | 20 | B.1.289 | 0.053191 |
noncoding | 29737 | G29737- | G | - | 19 | 19 | AY.92 | 0.005458 |
noncoding | 29737 | G29737- | G | - | 18 | 18 | AY.118 | 0.001128 |
noncoding | 29737 | G29737- | G | - | 18 | 18 | AY.45 | 0.00219 |
noncoding | 29737 | G29737- | G | - | 18 | 18 | B.1.1.172 | 0.327273 |
noncoding | 29737 | G29737- | G | - | 18 | 18 | B.1.1.307 | 0.04557 |
noncoding | 29737 | G29737- | G | - | 18 | 18 | B.1.404 | 0.023438 |
noncoding | 29737 | G29737- | G | - | 15 | 15 | B.1.240 | 0.003233 |
noncoding | 29737 | G29737- | G | - | 15 | 15 | B.1.36.18 | 0.006303 |
noncoding | 29737 | G29737- | G | - | 14 | 14 | B.1.1.214 | 0.000776 |
noncoding | 29737 | G29737- | G | - | 14 | 14 | B.1.1.28 | 0.004357 |
noncoding | 29737 | G29737- | G | - | 14 | 14 | B.1.36.1 | 0.015964 |
noncoding | 29737 | G29737- | G | - | 14 | 14 | B.1.36.29 | 0.007243 |
noncoding | 29737 | G29737- | G | - | 13 | 13 | AY.61 | 0.001362 |
noncoding | 29737 | G29737- | G | - | 13 | 13 | AY.74 | 0.001503 |
noncoding | 29737 | G29737- | G | - | 13 | 13 | AY.75.1 | 0.002344 |
noncoding | 29737 | G29737- | G | - | 13 | 13 | AY.98.1 | 0.00063 |
noncoding | 29737 | G29737- | G | - | 13 | 13 | B.1.1.33 | 0.005471 |
noncoding | 29737 | G29737- | G | - | 13 | 13 | B.1.177.7 | 0.002143 |
noncoding | 29737 | G29737- | G | - | 13 | 13 | B.1.311 | 0.003569 |
noncoding | 29737 | G29737- | G | - | 12 | 12 | B.1.1.416 | 0.01086 |
noncoding | 29737 | G29737- | G | - | 12 | 12 | B.1.36 | 0.001751 |
noncoding | 29737 | G29737- | G | - | 11 | 11 | AY.117 | 0.00093 |
noncoding | 29737 | G29737- | G | - | 11 | 11 | AY.75 | 0.000616 |
noncoding | 29737 | G29737- | G | - | 11 | 11 | AY.9 | 0.000744 |
noncoding | 29737 | G29737- | G | - | 11 | 11 | AY.9.2 | 0.000404 |
noncoding | 29737 | G29737- | G | - | 11 | 11 | B.1.177.62 | 0.013111 |
noncoding | 29737 | G29737- | G | - | 11 | 11 | B.1.177.75 | 0.011446 |
noncoding | 29737 | G29737- | G | - | 11 | 11 | B.1.623 | 0.005901 |
noncoding | 29737 | G29737- | G | - | 11 | 11 | P.2 | 0.002053 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | AY.114 | 0.002311 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | AY.23 | 0.000697 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | AY.46.4 | 0.001645 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | B | 0.001278 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | B.1.1.25 | 0.005685 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | B.1.1.279 | 0.011211 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | B.1.1.306 | 0.004384 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | B.1.234 | 0.001319 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | B.1.416 | 0.01269 |
noncoding | 29737 | G29737- | G | - | 10 | 10 | B.1.422 | 0.008123 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | AY.12 | 0.002845 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | AY.2 | 0.003205 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | AY.34.1 | 0.004589 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | AY.46 | 0.000937 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | AY.46.5 | 0.001786 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | B.1.1.434 | 0.003137 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | B.1.160.14 | 0.019068 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | B.1.258.3 | 0.015075 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | B.1.398 | 0.026786 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | B.1.400 | 0.003861 |
noncoding | 29737 | G29737- | G | - | 9 | 9 | B.1.575 | 0.002731 |
noncoding | 29737 | G29737- | G | - | 8 | 8 | A.1 | 0.002255 |
noncoding | 29737 | G29737- | G | - | 8 | 8 | AY.34 | 0.000776 |
noncoding | 29737 | G29737- | G | - | 8 | 8 | AY.54 | 0.000763 |
noncoding | 29737 | G29737- | G | - | 8 | 8 | AY.99.2 | 0.000737 |
noncoding | 29737 | G29737- | G | - | 8 | 8 | B.1.1.153 | 0.008762 |
noncoding | 29737 | G29737- | G | - | 8 | 8 | B.1.36.22 | 0.009662 |
noncoding | 29737 | G29737- | G | - | 8 | 8 | C.36.3 | 0.004538 |
noncoding | 29737 | G29737- | G | - | 7 | 7 | AY.13 | 0.001127 |
noncoding | 29737 | G29737- | G | - | 7 | 7 | AY.85 | 0.00299 |
noncoding | 29737 | G29737- | G | - | 7 | 7 | B.1.1.39 | 0.003568 |
noncoding | 29737 | G29737- | G | - | 7 | 7 | B.1.1.526 | 0.024823 |
noncoding | 29737 | G29737- | G | - | 7 | 7 | B.1.110.3 | 0.005029 |
noncoding | 29737 | G29737- | G | - | 7 | 7 | B.1.160.33 | 0.030973 |
noncoding | 29737 | G29737- | G | - | 7 | 7 | B.1.499 | 0.007353 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | A | 0.002322 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | AY.14 | 0.000528 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | AY.33 | 0.000401 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | AY.35 | 0.001398 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | AY.65 | 0.003198 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | B.1.1.316 | 0.00555 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | B.1.1.317 | 0.00247 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | B.1.1.318 | 0.001811 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | B.1.177.18 | 0.006961 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | B.1.241 | 0.00487 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | B.1.389 | 0.006012 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | B.1.595.1 | 0.035088 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | B.1.637 | 0.000438 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | B.40 | 0.002186 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | D.2 | 0.00045 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | N.4 | 0.025532 |
noncoding | 29737 | G29737- | G | - | 6 | 6 | Q.1 | 0.000758 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | AY.36 | 0.000741 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | B.1.1.189 | 0.007564 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | B.1.1.369 | 0.002231 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | B.1.149 | 0.017123 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | B.1.177.32 | 0.006748 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | B.1.177.60 | 0.001092 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | B.1.177.86 | 0.000917 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | B.1.258.14 | 0.004902 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | B.1.279 | 0.002568 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | B.1.609 | 0.002397 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | N.5 | 0.008834 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | P.1.15 | 0.001162 |
noncoding | 29737 | G29737- | G | - | 5 | 5 | Q.4 | 0.002274 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | AY.109 | 0.002959 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | AY.30 | 0.001583 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | AY.59 | 0.002119 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | AY.84 | 0.00175 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.1.1 | 0.001307 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.1.41 | 0.025316 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.1.46 | 0.017467 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.1.464 | 0.005891 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.177.87 | 0.002911 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.210 | 0.008529 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.469 | 0.01444 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.517 | 0.001708 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.568 | 0.004444 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.582 | 0.001963 |
noncoding | 29737 | G29737- | G | - | 4 | 4 | B.1.588 | 0.00364 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | A.2.5 | 0.001497 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.110 | 0.000338 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.27 | 0.000194 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.3.1 | 0.000256 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.32 | 0.001597 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.39.1 | 0.000119 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.40 | 0.002893 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.5.3 | 0.001012 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.51 | 0.002727 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.62 | 0.001307 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.7 | 0.000588 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | AY.9.1 | 0.000251 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.192 | 0.006928 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.228 | 0.009146 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.236 | 0.02069 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.337 | 0.010791 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.375 | 0.035714 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.385 | 0.013393 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.397 | 0.006757 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.401 | 0.2 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.428 | 0.028302 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.57 | 0.034483 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.1.70 | 0.001023 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.111 | 0.003525 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.145 | 0.157895 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.258.21 | 0.023256 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.36.16 | 0.004274 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.36.17 | 0.001482 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.36.31 | 0.005254 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.369 | 0.000856 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.396 | 0.002117 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.399 | 0.005803 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.416.1 | 0.004687 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.44 | 0.025 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.466.2 | 0.001174 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.1.505 | 0.013158 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | B.39 | 0.006993 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | P.1.1 | 0.000953 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | P.1.17 | 0.000485 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | P.1.7 | 0.000958 |
noncoding | 29737 | G29737- | G | - | 3 | 3 | Q.8 | 0.000495 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | A.23.1 | 0.001408 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AD.2 | 0.000438 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AY.10 | 0.00106 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AY.106 | 0.00067 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AY.111 | 0.000366 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AY.19 | 0.002281 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AY.46.3 | 0.001867 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AY.56 | 0.00321 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AY.71 | 0.00095 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AY.94 | 0.000885 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AY.95 | 0.001522 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | AZ.2 | 0.001642 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.170 | 0.002494 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.194 | 0.009901 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.216 | 0.001781 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.275 | 0.022472 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.284 | 0.000215 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.305 | 0.007722 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.348 | 0.001592 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.354 | 0.008772 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.372 | 0.001377 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.50 | 0.001358 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.1.528 | 0.009615 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.126 | 0.002551 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.160.32 | 0.008584 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.177.21 | 0.000153 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.177.50 | 0.00939 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.177.77 | 0.001452 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.177.78 | 0.019417 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.206 | 0.001631 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.23 | 0.012121 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.258.10 | 0.022727 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.298 | 0.004228 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.350 | 0.005865 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.351.3 | 0.001753 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.36.10 | 0.009569 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.36.8 | 0.002 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.391 | 0.002255 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.436 | 0.002058 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.441 | 0.019231 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.509 | 0.001732 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.543 | 0.02 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.551 | 0.002581 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.561 | 0.000794 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.565 | 0.001621 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.575.1 | 0.004878 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.577 | 0.001375 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.597 | 0.009259 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.617.1 | 0.000258 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.627 | 0.00404 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | B.1.628 | 0.000705 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | C.36 | 0.001821 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | C.36.2 | 0.068966 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | C.38 | 0.016129 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | P.1.10 | 0.000539 |
noncoding | 29737 | G29737- | G | - | 2 | 2 | P.1.13 | 0.001797 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | A.2.3 | 0.004739 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | A.30 | 0.142857 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AH.2 | 0.012048 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AK.2 | 0.045455 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AU.1 | 0.001266 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.105 | 0.000643 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.108 | 0.001103 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.120.1 | 0.000321 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.120.2.1 | 0.000498 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.16 | 0.00038 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.24 | 0.000431 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.29.1 | 0.000221 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.48 | 0.000465 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.52 | 0.000814 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.55 | 0.000917 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.66 | 0.00107 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.81 | 0.001992 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.87 | 0.000833 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.88 | 0.000884 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.91 | 0.00073 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AY.98 | 0.000079 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | AZ.1 | 0.000867 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.10 | 0.001115 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.139 | 0.022727 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.154 | 0.04 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.174 | 0.003378 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.196 | 0.005714 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.197 | 0.037037 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.198 | 0.001468 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.218 | 0.007692 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.229 | 0.005747 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.277 | 0.000759 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.286 | 0.002899 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.289 | 0.002083 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.297 | 0.002237 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.298 | 0.000862 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.352 | 0.03125 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.389 | 0.006061 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.420 | 0.001006 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.432 | 0.001266 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.433 | 0.001425 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.466 | 0.008696 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.47 | 0.005348 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.517 | 0.006803 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.63 | 0.000386 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.1.71 | 0.006061 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.139 | 0.000733 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.160.27 | 0.015152 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.162 | 0.005025 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.167 | 0.007812 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.170 | 0.00431 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.12 | 0.000152 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.30 | 0.002513 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.4 | 0.000211 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.44 | 0.000519 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.51 | 0.004566 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.53 | 0.002392 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.57 | 0.000281 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.6 | 0.000977 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.65 | 0.000665 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.73 | 0.000566 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.79 | 0.002342 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.177.82 | 0.000477 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.180 | 0.05 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.192 | 0.009259 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.214 | 0.003663 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.214.2 | 0.0006 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.221.4 | 0.004167 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.222 | 0.001692 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.232 | 0.000537 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.258.16 | 0.001637 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.291 | 0.019231 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.320 | 0.001245 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.336 | 0.002439 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.340 | 0.004292 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.359 | 0.022727 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.36.19 | 0.009259 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.36.36 | 0.000602 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.36.37 | 0.002778 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.362 | 0.001541 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.390 | 0.010638 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.442 | 0.035714 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.443 | 0.004673 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.470 | 0.001404 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.493 | 0.025641 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.503 | 0.002488 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.508 | 0.025641 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.564.1 | 0.001577 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.567 | 0.003333 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.576 | 0.000907 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.600 | 0.005848 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.617.3 | 0.002985 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.619 | 0.000871 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.620 | 0.000946 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.631 | 0.003367 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.1.633 | 0.041667 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.3 | 0.000831 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.3.1 | 0.001658 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.31 | 0.003731 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.4.2 | 0.066667 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.55 | 0.00295 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | B.6 | 0.00091 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | C.1.2 | 0.004255 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | C.35 | 0.000774 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | D.5 | 0.004975 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | P.1.12 | 0.000484 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | P.1.2 | 0.001156 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | P.1.4 | 0.000977 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | P.6 | 0.003145 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | P.7 | 0.004367 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | Q.2 | 0.000613 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | Q.3 | 0.000145 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | Q.7 | 0.001111 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | W.1 | 0.008696 |
noncoding | 29737 | G29737- | G | - | 1 | 1 | W.4 | 0.001351 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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