CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : Mut = G29540A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29540G29540AnoncodingGA50225022129540-29540

Details of the mutation G29540A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29540G29540AGA50225022All0.000961
noncoding29540G29540AGA14861486B.10.013611
noncoding29540G29540AGA11861186AY.40.001846
noncoding29540G29540AGA949949B.1.4990.996849
noncoding29540G29540AGA394394B.1.5030.9801
noncoding29540G29540AGA221221B.1.5050.969298
noncoding29540G29540AGA153153B.1.1.70.000137
noncoding29540G29540AGA126126B.1.5010.926471
noncoding29540G29540AGA8383B.1.5070.932584
noncoding29540G29540AGA3838B.1.5080.974359
noncoding29540G29540AGA3737B.1.5060.880952
noncoding29540G29540AGA3535B.1.4980.714286
noncoding29540G29540AGA3131B.1.5040.96875
noncoding29540G29540AGA2525B.1.6151
noncoding29540G29540AGA2424B.1.6110.96
noncoding29540G29540AGA2222AY.1140.005084
noncoding29540G29540AGA2121B.1.617.20.000079
noncoding29540G29540AGA1919B.1.5021
noncoding29540G29540AGA1414B.1.5000.736842
noncoding29540G29540AGA1111AY.4.20.000239
noncoding29540G29540AGA1010AY.1020.000265
noncoding29540G29540AGA1010AY.440.000061
noncoding29540G29540AGA99AY.390.000222
noncoding29540G29540AGA99B.1.499.11
noncoding29540G29540AGA66AY.30.00006
noncoding29540G29540AGA55AY.1030.000031
noncoding29540G29540AGA44B.1.10.000073
noncoding29540G29540AGA33AY.430.000013
noncoding29540G29540AGA33B.1.20.000026
noncoding29540G29540AGA33B.1.3510.000089
noncoding29540G29540AGA33B.1.3620.004622
noncoding29540G29540AGA33B.1.5260.000071
noncoding29540G29540AGA22AY.1100.000225
noncoding29540G29540AGA22AY.50.000041
noncoding29540G29540AGA22AY.870.001665
noncoding29540G29540AGA22B.1.1.5260.007092
noncoding29540G29540AGA22B.1.1570.00597
noncoding29540G29540AGA22B.1.160.100.016129
noncoding29540G29540AGA22B.1.1770.000026
noncoding29540G29540AGA22B.1.177.730.001133
noncoding29540G29540AGA22B.1.3020.026667
noncoding29540G29540AGA22B.1.36.290.001035
noncoding29540G29540AGA22B.1.3670.001585
noncoding29540G29540AGA22B.1.4390.011834
noncoding29540G29540AGA22B.1.4930.051282
noncoding29540G29540AGA22B.1.5440.012048
noncoding29540G29540AGA22B.1.5950.000522
noncoding29540G29540AGA22B.1.6210.000177
noncoding29540G29540AGA11AY.1000.000046
noncoding29540G29540AGA11AY.1190.000035
noncoding29540G29540AGA11AY.200.000039
noncoding29540G29540AGA11AY.290.000016
noncoding29540G29540AGA11AY.300.000396
noncoding29540G29540AGA11AY.360.000148
noncoding29540G29540AGA11AY.420.00004
noncoding29540G29540AGA11AY.510.000909
noncoding29540G29540AGA11AY.540.000095
noncoding29540G29540AGA11AY.650.000533
noncoding29540G29540AGA11AY.670.000464
noncoding29540G29540AGA11AY.690.000187
noncoding29540G29540AGA11B.1.1.1280.007092
noncoding29540G29540AGA11B.1.1.1350.004695
noncoding29540G29540AGA11B.1.1.1960.005714
noncoding29540G29540AGA11B.1.1.2140.000055
noncoding29540G29540AGA11B.1.1.2220.000204
noncoding29540G29540AGA11B.1.1.2690.001353
noncoding29540G29540AGA11B.1.1.270.00565
noncoding29540G29540AGA11B.1.1.3350.012987
noncoding29540G29540AGA11B.1.1.4090.002833
noncoding29540G29540AGA11B.1.1.4400.011765
noncoding29540G29540AGA11B.1.1.500.000679
noncoding29540G29540AGA11B.1.1.5190.00004
noncoding29540G29540AGA11B.1.1400.018868
noncoding29540G29540AGA11B.1.1600.000031
noncoding29540G29540AGA11B.1.177.440.000519
noncoding29540G29540AGA11B.1.177.630.002703
noncoding29540G29540AGA11B.1.2400.000216
noncoding29540G29540AGA11B.1.3160.111111
noncoding29540G29540AGA11B.1.36.10.00114
noncoding29540G29540AGA11B.1.36.160.001425
noncoding29540G29540AGA11B.1.3690.000285
noncoding29540G29540AGA11B.1.3980.002976
noncoding29540G29540AGA11B.1.4290.000024
noncoding29540G29540AGA11B.1.5210.004975
noncoding29540G29540AGA11B.1.5760.000907
noncoding29540G29540AGA11B.1.5820.000491
noncoding29540G29540AGA11B.1.5960.000087
noncoding29540G29540AGA11B.1.6010.030303
noncoding29540G29540AGA11B.1.6250.002353
noncoding29540G29540AGA11B.1.6370.000073
noncoding29540G29540AGA11B.1.9.50.005682
noncoding29540G29540AGA11B.60.00091
noncoding29540G29540AGA11N.50.001767
noncoding29540G29540AGA11P.10.000016
noncoding29540G29540AGA11Q.40.000455