CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 29738 | C29738T | noncoding | C | T | 15142 | 15142 | 1 | 29738-29738 |
Details of the mutation C29738T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 29738 | C29738T | C | T | 15142 | 15142 | All | 0.002896 |
noncoding | 29738 | C29738T | C | T | 6076 | 6076 | AY.36 | 0.900548 |
noncoding | 29738 | C29738T | C | T | 1530 | 1530 | AY.4 | 0.002381 |
noncoding | 29738 | C29738T | C | T | 1225 | 1225 | B.1.1.7 | 0.001097 |
noncoding | 29738 | C29738T | C | T | 806 | 806 | B.1 | 0.007383 |
noncoding | 29738 | C29738T | C | T | 804 | 804 | B.1.617.2 | 0.003027 |
noncoding | 29738 | C29738T | C | T | 555 | 555 | AY.39 | 0.013715 |
noncoding | 29738 | C29738T | C | T | 354 | 354 | AY.102 | 0.009386 |
noncoding | 29738 | C29738T | C | T | 318 | 318 | AY.43 | 0.001409 |
noncoding | 29738 | C29738T | C | T | 256 | 256 | AY.103 | 0.00159 |
noncoding | 29738 | C29738T | C | T | 236 | 236 | B.1.2 | 0.002078 |
noncoding | 29738 | C29738T | C | T | 200 | 200 | B.1.243 | 0.013917 |
noncoding | 29738 | C29738T | C | T | 177 | 177 | AY.44 | 0.001077 |
noncoding | 29738 | C29738T | C | T | 143 | 143 | AY.25 | 0.00086 |
noncoding | 29738 | C29738T | C | T | 132 | 132 | B.1.258 | 0.008784 |
noncoding | 29738 | C29738T | C | T | 98 | 98 | B.1.177 | 0.00129 |
noncoding | 29738 | C29738T | C | T | 86 | 86 | AY.26 | 0.002435 |
noncoding | 29738 | C29738T | C | T | 84 | 84 | B.1.427 | 0.004242 |
noncoding | 29738 | C29738T | C | T | 83 | 83 | AY.3 | 0.000826 |
noncoding | 29738 | C29738T | C | T | 83 | 83 | P.1 | 0.001308 |
noncoding | 29738 | C29738T | C | T | 74 | 74 | AY.93 | 0.020208 |
noncoding | 29738 | C29738T | C | T | 66 | 66 | AY.20 | 0.002565 |
noncoding | 29738 | C29738T | C | T | 59 | 59 | B.1.1.39 | 0.030071 |
noncoding | 29738 | C29738T | C | T | 57 | 57 | AY.98.1 | 0.002761 |
noncoding | 29738 | C29738T | C | T | 53 | 53 | B.1.311 | 0.014552 |
noncoding | 29738 | C29738T | C | T | 52 | 52 | AY.4.2 | 0.001128 |
noncoding | 29738 | C29738T | C | T | 49 | 49 | B.1.36 | 0.007149 |
noncoding | 29738 | C29738T | C | T | 42 | 42 | B.1.177.16 | 0.027907 |
noncoding | 29738 | C29738T | C | T | 36 | 36 | B.1.1 | 0.000653 |
noncoding | 29738 | C29738T | C | T | 33 | 33 | AY.100 | 0.001518 |
noncoding | 29738 | C29738T | C | T | 32 | 32 | B.1.576 | 0.029012 |
noncoding | 29738 | C29738T | C | T | 31 | 31 | AY.91 | 0.022644 |
noncoding | 29738 | C29738T | C | T | 30 | 30 | B.1.160 | 0.000936 |
noncoding | 29738 | C29738T | C | T | 29 | 29 | B.1.1.214 | 0.001608 |
noncoding | 29738 | C29738T | C | T | 28 | 28 | B.1.177.55 | 0.065268 |
noncoding | 29738 | C29738T | C | T | 28 | 28 | B.1.36.1 | 0.031927 |
noncoding | 29738 | C29738T | C | T | 26 | 26 | AY.119 | 0.000918 |
noncoding | 29738 | C29738T | C | T | 26 | 26 | AY.23 | 0.001813 |
noncoding | 29738 | C29738T | C | T | 24 | 24 | Q.2 | 0.014724 |
noncoding | 29738 | C29738T | C | T | 23 | 23 | AY.5 | 0.000475 |
noncoding | 29738 | C29738T | C | T | 23 | 23 | B.1.351 | 0.000684 |
noncoding | 29738 | C29738T | C | T | 23 | 23 | B.1.429 | 0.000541 |
noncoding | 29738 | C29738T | C | T | 22 | 22 | AY.47 | 0.000684 |
noncoding | 29738 | C29738T | C | T | 22 | 22 | B.1.609 | 0.010547 |
noncoding | 29738 | C29738T | C | T | 21 | 21 | AY.46 | 0.002186 |
noncoding | 29738 | C29738T | C | T | 19 | 19 | AY.111 | 0.00348 |
noncoding | 29738 | C29738T | C | T | 18 | 18 | AY.45 | 0.00219 |
noncoding | 29738 | C29738T | C | T | 17 | 17 | AY.29 | 0.000268 |
noncoding | 29738 | C29738T | C | T | 16 | 16 | AY.117 | 0.001352 |
noncoding | 29738 | C29738T | C | T | 16 | 16 | AY.118 | 0.001002 |
noncoding | 29738 | C29738T | C | T | 16 | 16 | AY.120 | 0.000595 |
noncoding | 29738 | C29738T | C | T | 16 | 16 | AY.61 | 0.001676 |
noncoding | 29738 | C29738T | C | T | 16 | 16 | B.1.1.519 | 0.000635 |
noncoding | 29738 | C29738T | C | T | 16 | 16 | R.1 | 0.00144 |
noncoding | 29738 | C29738T | C | T | 15 | 15 | AY.34 | 0.001454 |
noncoding | 29738 | C29738T | C | T | 15 | 15 | AY.42 | 0.000603 |
noncoding | 29738 | C29738T | C | T | 15 | 15 | B.1.240 | 0.003233 |
noncoding | 29738 | C29738T | C | T | 14 | 14 | B.1.525 | 0.001584 |
noncoding | 29738 | C29738T | C | T | 14 | 14 | B.1.621 | 0.001239 |
noncoding | 29738 | C29738T | C | T | 13 | 13 | B.1.177.81 | 0.002461 |
noncoding | 29738 | C29738T | C | T | 12 | 12 | AY.116 | 0.003441 |
noncoding | 29738 | C29738T | C | T | 12 | 12 | AY.69 | 0.00224 |
noncoding | 29738 | C29738T | C | T | 12 | 12 | B.1.526 | 0.000282 |
noncoding | 29738 | C29738T | C | T | 11 | 11 | AY.33 | 0.000735 |
noncoding | 29738 | C29738T | C | T | 9 | 9 | A.2.5 | 0.004491 |
noncoding | 29738 | C29738T | C | T | 9 | 9 | AY.60 | 0.008443 |
noncoding | 29738 | C29738T | C | T | 9 | 9 | AY.75 | 0.000504 |
noncoding | 29738 | C29738T | C | T | 9 | 9 | B.1.1.50 | 0.00611 |
noncoding | 29738 | C29738T | C | T | 9 | 9 | B.1.336 | 0.021951 |
noncoding | 29738 | C29738T | C | T | 9 | 9 | B.1.433 | 0.028754 |
noncoding | 29738 | C29738T | C | T | 8 | 8 | AY.121 | 0.001083 |
noncoding | 29738 | C29738T | C | T | 8 | 8 | AY.24 | 0.003448 |
noncoding | 29738 | C29738T | C | T | 8 | 8 | AY.5.3 | 0.002699 |
noncoding | 29738 | C29738T | C | T | 8 | 8 | AY.72 | 0.010884 |
noncoding | 29738 | C29738T | C | T | 8 | 8 | AY.78 | 0.012327 |
noncoding | 29738 | C29738T | C | T | 8 | 8 | AY.99.2 | 0.000737 |
noncoding | 29738 | C29738T | C | T | 8 | 8 | B.1.199 | 0.033058 |
noncoding | 29738 | C29738T | C | T | 8 | 8 | B.1.574 | 0.017204 |
noncoding | 29738 | C29738T | C | T | 8 | 8 | B.1.596 | 0.000697 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | AY.107 | 0.003262 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | AY.109 | 0.005178 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | AY.14 | 0.000616 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | AY.39.1 | 0.000277 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | AY.46.6 | 0.000505 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | AY.75.1 | 0.001262 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | AY.9.2 | 0.000257 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | AY.92 | 0.002011 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | B.1.1.37 | 0.00135 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | B.1.177.4 | 0.001477 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | B.1.221 | 0.000497 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | C.37 | 0.000812 |
noncoding | 29738 | C29738T | C | T | 7 | 7 | Q.8 | 0.001154 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | AY.30 | 0.002374 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | AY.54 | 0.000572 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | AY.64 | 0.003571 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | AY.9 | 0.000406 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | B.1.1.222 | 0.001224 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | B.1.1.326 | 0.010563 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | B.1.408 | 0.02214 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | B.1.470 | 0.008427 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | P.1.14 | 0.000287 |
noncoding | 29738 | C29738T | C | T | 6 | 6 | P.1.7 | 0.001916 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | AY.106 | 0.001674 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | AY.46.4 | 0.000823 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | AY.59 | 0.002648 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | AY.65 | 0.002665 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | AY.9.1 | 0.000419 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | AY.94 | 0.002213 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | AY.98 | 0.000395 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | AY.99 | 0.005247 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | B.1.139 | 0.003666 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | B.1.177.21 | 0.000382 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | B.1.177.7 | 0.000824 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | B.1.177.73 | 0.002831 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | B.1.234 | 0.00066 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | B.1.258.5 | 0.04386 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | B.1.466.2 | 0.001956 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | B.1.469 | 0.018051 |
noncoding | 29738 | C29738T | C | T | 5 | 5 | B.1.617.1 | 0.000645 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | AY.116.1 | 0.001246 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | AY.21 | 0.00759 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | AY.34.1 | 0.00204 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | AY.4.5 | 0.00043 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | AY.55 | 0.00367 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | AY.6 | 0.000165 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | AY.68 | 0.001095 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | B.1.117 | 0.05 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | B.1.149 | 0.013699 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | B.1.177.63 | 0.010811 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | B.1.214.4 | 0.036364 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | B.1.428 | 0.004082 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | B.1.564 | 0.001704 |
noncoding | 29738 | C29738T | C | T | 4 | 4 | B.1.577 | 0.002749 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | AD.2 | 0.000657 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | AY.105 | 0.001929 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | AY.16 | 0.001139 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | AY.22 | 0.006276 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | AY.74 | 0.000347 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | AY.84 | 0.001312 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | AY.88 | 0.002653 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.1.1 | 0.00098 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.1.25 | 0.001706 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.1.253 | 0.007519 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.1.28 | 0.000934 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.1.33 | 0.001263 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.1.434 | 0.001046 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.1.523 | 0.004687 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.111 | 0.003525 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.170 | 0.012931 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.36.38 | 0.004926 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.400 | 0.001287 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.471 | 0.008197 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.595 | 0.000783 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | B.1.628 | 0.001057 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | D.2 | 0.000225 |
noncoding | 29738 | C29738T | C | T | 3 | 3 | N.4 | 0.012766 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AE.8 | 0.000978 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AM.4 | 0.007143 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AU.1 | 0.002532 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AW.1 | 0.006098 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.104 | 0.003968 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.110 | 0.000225 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.13 | 0.000322 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.37 | 0.000632 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.4.2.1 | 0.000298 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.46.2 | 0.001271 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.50 | 0.001599 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.51 | 0.001818 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.70 | 0.000417 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.73 | 0.001331 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.87 | 0.001665 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.90 | 0.001369 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | AY.95 | 0.001522 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.141 | 0.004024 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.210 | 0.011429 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.231 | 0.006192 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.284 | 0.000215 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.294 | 0.002532 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.303 | 0.005525 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.306 | 0.000877 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.317 | 0.000823 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.369 | 0.000892 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.372 | 0.001377 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.1.486 | 0.003155 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.128 | 0.001271 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.177.20 | 0.003035 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.177.62 | 0.002384 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.222 | 0.003384 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.258.21 | 0.015504 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.270 | 0.011236 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.36.24 | 0.012346 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.396 | 0.001411 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.438.1 | 0.000215 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.580 | 0.00813 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.588 | 0.00182 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.1.599 | 0.007299 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.4 | 0.004415 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | B.40 | 0.000729 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | C.36 | 0.001821 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | P.1.15 | 0.000465 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | P.1.17 | 0.000324 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | P.2 | 0.000373 |
noncoding | 29738 | C29738T | C | T | 2 | 2 | Q.1 | 0.000253 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | A | 0.000387 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | A.25 | 0.018182 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | A.5 | 0.001923 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AH.3 | 0.003802 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.1 | 0.000396 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.108 | 0.001103 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.113 | 0.000142 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.114 | 0.000231 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.16.1 | 0.00047 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.23.1 | 0.000417 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.27 | 0.000065 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.28 | 0.00189 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.31 | 0.018519 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.32 | 0.000532 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.35 | 0.000233 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.4.1 | 0.000737 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.4.3 | 0.000842 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.40 | 0.000964 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.46.1 | 0.001027 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.46.3 | 0.000934 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.46.5 | 0.000198 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.48 | 0.000465 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.5.4 | 0.000277 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.53 | 0.000288 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.56 | 0.001605 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.57 | 0.000656 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.67 | 0.000464 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.7 | 0.000196 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.7.1 | 0.000113 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.79 | 0.001211 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.8 | 0.000606 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.80 | 0.001129 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.82 | 0.001357 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.96 | 0.002075 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | AY.97 | 0.001701 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B | 0.000128 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.129 | 0.009174 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.157 | 0.000913 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.161 | 0.003534 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.170 | 0.001247 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.189 | 0.001513 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.243 | 0.004082 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.265 | 0.003155 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.280 | 0.003086 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.297 | 0.002237 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.304 | 0.002809 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.316 | 0.000925 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.318 | 0.000302 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.344 | 0.010753 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.348 | 0.000796 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.354 | 0.004386 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.368 | 0.003086 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.416 | 0.000905 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.432 | 0.001266 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.44 | 0.00241 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.506 | 0.037037 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.514 | 0.038462 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.1.63 | 0.000386 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.110.3 | 0.000718 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.126 | 0.001276 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.147 | 0.000756 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.160.27 | 0.015152 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.160.29 | 0.004219 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.160.8 | 0.001289 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.173 | 0.026316 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.177.17 | 0.000821 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.177.35 | 0.000691 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.177.50 | 0.004695 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.177.57 | 0.000281 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.177.60 | 0.000218 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.177.78 | 0.009709 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.177.79 | 0.002342 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.177.86 | 0.000183 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.177.87 | 0.000728 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.179 | 0.003759 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.219 | 0.009434 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.229 | 0.009709 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.235 | 0.002519 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.237 | 0.004975 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.256 | 0.017241 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.258.17 | 0.000104 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.298 | 0.002114 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.3 | 0.002618 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.306 | 0.005714 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.313 | 0.006579 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.315 | 0.006061 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.350 | 0.002933 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.351.2 | 0.000303 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.351.3 | 0.000876 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.36.10 | 0.004785 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.36.29 | 0.000517 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.36.8 | 0.001 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.361 | 0.001289 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.369 | 0.000285 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.381 | 0.007812 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.389 | 0.001002 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.391 | 0.001127 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.399 | 0.001934 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.409 | 0.000781 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.416 | 0.001269 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.420 | 0.010417 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.426 | 0.001009 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.428.2 | 0.033333 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.432 | 0.011236 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.44 | 0.008333 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.505 | 0.004386 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.517 | 0.000427 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.524 | 0.001406 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.537 | 0.02 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.554 | 0.004405 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.561 | 0.000397 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.606 | 0.006024 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.623 | 0.000536 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.637 | 0.000073 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.1.9 | 0.006173 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | B.11 | 0.005128 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | C.1.2 | 0.004255 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | C.36.1 | 0.004149 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | C.36.3 | 0.000567 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | P.1.10.1 | 0.00813 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | P.1.12 | 0.000484 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | P.1.13 | 0.000898 |
noncoding | 29738 | C29738T | C | T | 1 | 1 | P.1.6 | 0.001946 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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