CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : Mut = C29708T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29708C29708TnoncodingCT64816481129708-29708

Details of the mutation C29708T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29708C29708TCT64816481All0.00124
noncoding29708C29708TCT13721372B.1.1.70.001228
noncoding29708C29708TCT525525AY.40.000817
noncoding29708C29708TCT412412B.1.617.20.001551
noncoding29708C29708TCT367367AY.250.002207
noncoding29708C29708TCT299299B.1.20.002633
noncoding29708C29708TCT259259AY.430.001147
noncoding29708C29708TCT222222AY.1130.03161
noncoding29708C29708TCT178178B.10.00163
noncoding29708C29708TCT145145B.1.1.710.878788
noncoding29708C29708TCT129129B.1.1600.004023
noncoding29708C29708TCT119119P.10.001875
noncoding29708C29708TCT117117AY.440.000712
noncoding29708C29708TCT9797B.1.10.00176
noncoding29708C29708TCT9595AY.1070.044268
noncoding29708C29708TCT8181AY.50.001673
noncoding29708C29708TCT7171AY.1030.000441
noncoding29708C29708TCT6464B.1.177.600.01398
noncoding29708C29708TCT6060B.1.2430.004175
noncoding29708C29708TCT5454AY.30.000537
noncoding29708C29708TCT4444AY.4.20.000954
noncoding29708C29708TCT4444B.1.2210.003125
noncoding29708C29708TCT4242AY.99.20.003871
noncoding29708C29708TCT3939B.1.1770.000514
noncoding29708C29708TCT3838B.1.3690.010839
noncoding29708C29708TCT3737AY.1020.000981
noncoding29708C29708TCT3737B.1.4290.000871
noncoding29708C29708TCT3636AY.740.004163
noncoding29708C29708TCT3636B.1.1.2140.001996
noncoding29708C29708TCT2929AY.480.013488
noncoding29708C29708TCT2929AY.600.027205
noncoding29708C29708TCT2929B.1.1.2220.005916
noncoding29708C29708TCT2929B.1.5750.008799
noncoding29708C29708TCT2828B.1.5260.000658
noncoding29708C29708TCT2828P.1.10.008895
noncoding29708C29708TCT2727AY.1200.001004
noncoding29708C29708TCT2727AY.390.000667
noncoding29708C29708TCT2727AY.610.002829
noncoding29708C29708TCT2626B.1.2340.003431
noncoding29708C29708TCT2525B.1.160.160.023234
noncoding29708C29708TCT2424AY.360.003557
noncoding29708C29708TCT2323AY.1170.001944
noncoding29708C29708TCT2323B.1.1.4090.065156
noncoding29708C29708TCT2222AY.46.60.001589
noncoding29708C29708TCT2121AY.46.10.021561
noncoding29708C29708TCT2121AY.980.001659
noncoding29708C29708TCT1919AY.920.005458
noncoding29708C29708TCT1919B.1.177.30.145038
noncoding29708C29708TCT1919B.1.3510.000565
noncoding29708C29708TCT1818AY.9.20.000661
noncoding29708C29708TCT1818P.1.140.00086
noncoding29708C29708TCT1717AY.116.10.005294
noncoding29708C29708TCT1717B.1.1110.019976
noncoding29708C29708TCT1616B.1.5960.001394
noncoding29708C29708TCT1515B.1.6210.001328
noncoding29708C29708TCT1414AY.1000.000644
noncoding29708C29708TCT1414AY.290.000221
noncoding29708C29708TCT1414B.1.2580.000932
noncoding29708C29708TCT1414B.1.3110.003844
noncoding29708C29708TCT1313AY.200.000505
noncoding29708C29708TCT1313AY.620.005664
noncoding29708C29708TCT1313B.1.1.3180.003923
noncoding29708C29708TCT1313B.1.1.5190.000516
noncoding29708C29708TCT1313B.1.438.10.001394
noncoding29708C29708TCT1212AY.39.10.000475
noncoding29708C29708TCT1212AY.450.00146
noncoding29708C29708TCT1212AY.46.40.001974
noncoding29708C29708TCT1212AY.470.000373
noncoding29708C29708TCT1212D.20.0009
noncoding29708C29708TCT1010AY.230.000697
noncoding29708C29708TCT1010B.1.1.3050.03861
noncoding29708C29708TCT1010B.1.177.810.001893
noncoding29708C29708TCT1010B.1.5990.036496
noncoding29708C29708TCT1010Q.30.00145
noncoding29708C29708TCT99AY.1190.000318
noncoding29708C29708TCT99AY.1210.001218
noncoding29708C29708TCT99AY.140.000792
noncoding29708C29708TCT99AY.7.20.005034
noncoding29708C29708TCT99B0.00115
noncoding29708C29708TCT99B.1.1.4200.009054
noncoding29708C29708TCT99B.1.177.350.00622
noncoding29708C29708TCT99N.40.038298
noncoding29708C29708TCT88AY.860.006639
noncoding29708C29708TCT88B.1.1.370.001543
noncoding29708C29708TCT88B.1.1.3980.025806
noncoding29708C29708TCT88B.1.1280.005083
noncoding29708C29708TCT88B.1.4270.000404
noncoding29708C29708TCT88B.1.4700.011236
noncoding29708C29708TCT77AY.330.000467
noncoding29708C29708TCT77B.1.2400.001509
noncoding29708C29708TCT77B.1.3360.017073
noncoding29708C29708TCT77B.1.360.001021
noncoding29708C29708TCT77B.1.5950.001827
noncoding29708C29708TCT77C.370.000812
noncoding29708C29708TCT66AY.340.000582
noncoding29708C29708TCT66AY.420.000241
noncoding29708C29708TCT66AY.98.10.000291
noncoding29708C29708TCT66B.1.1.280.001867
noncoding29708C29708TCT66B.1.1.3060.00263
noncoding29708C29708TCT66B.1.621.10.003035
noncoding29708C29708TCT66P.1.150.001394
noncoding29708C29708TCT66Q.10.000758
noncoding29708C29708TCT66Q.80.000989
noncoding29708C29708TCT55AY.260.000142
noncoding29708C29708TCT55AY.410.00147
noncoding29708C29708TCT55AY.460.00052
noncoding29708C29708TCT55AY.60.000206
noncoding29708C29708TCT55AY.970.008503
noncoding29708C29708TCT55B.1.1.2300.045872
noncoding29708C29708TCT55B.1.1.3170.002058
noncoding29708C29708TCT55B.1.177.420.004472
noncoding29708C29708TCT55B.1.2060.004078
noncoding29708C29708TCT55B.1.2320.002687
noncoding29708C29708TCT55B.1.4010.040984
noncoding29708C29708TCT55B.1.466.20.001956
noncoding29708C29708TCT55C.160.005302
noncoding29708C29708TCT55P.20.000933
noncoding29708C29708TCT44AY.16.10.00188
noncoding29708C29708TCT44AY.300.001583
noncoding29708C29708TCT44AY.320.00213
noncoding29708C29708TCT44AY.750.000224
noncoding29708C29708TCT44AY.800.004515
noncoding29708C29708TCT44AY.840.00175
noncoding29708C29708TCT44AY.930.001092
noncoding29708C29708TCT44B.1.1.100.004459
noncoding29708C29708TCT44B.1.1.2100.022857
noncoding29708C29708TCT44B.1.1.2840.00043
noncoding29708C29708TCT44B.1.1390.002933
noncoding29708C29708TCT44B.1.160.270.060606
noncoding29708C29708TCT44B.1.177.430.005908
noncoding29708C29708TCT44B.1.36.290.002069
noncoding29708C29708TCT44B.1.5090.003463
noncoding29708C29708TCT44B.1.617.10.000516
noncoding29708C29708TCT44R.10.00036
noncoding29708C29708TCT33AY.1180.000188
noncoding29708C29708TCT33AY.240.001293
noncoding29708C29708TCT33AY.380.001498
noncoding29708C29708TCT33AY.46.30.002801
noncoding29708C29708TCT33AY.5.30.001012
noncoding29708C29708TCT33AY.590.001589
noncoding29708C29708TCT33AY.690.00056
noncoding29708C29708TCT33AY.7.10.000338
noncoding29708C29708TCT33AY.730.001996
noncoding29708C29708TCT33AY.75.10.000541
noncoding29708C29708TCT33AY.9.10.000251
noncoding29708C29708TCT33AY.99.10.004658
noncoding29708C29708TCT33B.1.1.1890.004539
noncoding29708C29708TCT33B.1.1.2160.002671
noncoding29708C29708TCT33B.1.2360.00616
noncoding29708C29708TCT33B.1.2600.010033
noncoding29708C29708TCT33B.1.351.50.001799
noncoding29708C29708TCT33B.1.36.180.001261
noncoding29708C29708TCT33B.1.36.340.06383
noncoding29708C29708TCT33B.1.36.80.003
noncoding29708C29708TCT33B.1.3670.002377
noncoding29708C29708TCT33B.1.4990.003151
noncoding29708C29708TCT33B.1.5250.000339
noncoding29708C29708TCT33B.1.575.10.007317
noncoding29708C29708TCT33B.1.5780.053571
noncoding29708C29708TCT33B.1.6280.001057
noncoding29708C29708TCT33B.1.6370.000219
noncoding29708C29708TCT33C.350.002322
noncoding29708C29708TCT33P.1.130.002695
noncoding29708C29708TCT33P.1.70.000958
noncoding29708C29708TCT22A.20.001324
noncoding29708C29708TCT22A.23.10.001408
noncoding29708C29708TCT22AD.20.000438
noncoding29708C29708TCT22AE.80.000978
noncoding29708C29708TCT22AY.1160.000574
noncoding29708C29708TCT22AY.160.000759
noncoding29708C29708TCT22AY.270.000129
noncoding29708C29708TCT22AY.3.10.000171
noncoding29708C29708TCT22AY.4.50.000215
noncoding29708C29708TCT22AY.46.50.000397
noncoding29708C29708TCT22AY.570.001312
noncoding29708C29708TCT22AY.70.000392
noncoding29708C29708TCT22B.1.1.3160.00185
noncoding29708C29708TCT22B.1.1.3370.007194
noncoding29708C29708TCT22B.1.1.3690.000892
noncoding29708C29708TCT22B.1.1.4340.000697
noncoding29708C29708TCT22B.1.1.5250.010929
noncoding29708C29708TCT22B.1.1.5280.009615
noncoding29708C29708TCT22B.1.1.630.000772
noncoding29708C29708TCT22B.1.1470.001512
noncoding29708C29708TCT22B.1.177.210.000153
noncoding29708C29708TCT22B.1.177.60.001953
noncoding29708C29708TCT22B.1.177.70.00033
noncoding29708C29708TCT22B.1.177.770.001452
noncoding29708C29708TCT22B.1.177.860.000367
noncoding29708C29708TCT22B.1.177.90.002663
noncoding29708C29708TCT22B.1.258.170.000208
noncoding29708C29708TCT22B.1.2670.037037
noncoding29708C29708TCT22B.1.2790.001027
noncoding29708C29708TCT22B.1.3490.00143
noncoding29708C29708TCT22B.1.36.310.003503
noncoding29708C29708TCT22B.1.36.350.005208
noncoding29708C29708TCT22B.1.3890.002004
noncoding29708C29708TCT22B.1.4000.000858
noncoding29708C29708TCT22B.1.4160.002538
noncoding29708C29708TCT22B.1.5640.000852
noncoding29708C29708TCT22B.1.5680.002222
noncoding29708C29708TCT22B.1.5800.00813
noncoding29708C29708TCT22B.1.5820.000981
noncoding29708C29708TCT22B.1.6090.000959
noncoding29708C29708TCT22C.250.25
noncoding29708C29708TCT11A0.000387
noncoding29708C29708TCT11A.250.018182
noncoding29708C29708TCT11A.50.001923
noncoding29708C29708TCT11AE.50.018519
noncoding29708C29708TCT11AY.10.000396
noncoding29708C29708TCT11AY.1050.000643
noncoding29708C29708TCT11AY.1060.000335
noncoding29708C29708TCT11AY.1140.000231
noncoding29708C29708TCT11AY.120.000316
noncoding29708C29708TCT11AY.120.10.000321
noncoding29708C29708TCT11AY.130.000161
noncoding29708C29708TCT11AY.29.10.000221
noncoding29708C29708TCT11AY.350.000233
noncoding29708C29708TCT11AY.370.000316
noncoding29708C29708TCT11AY.4.10.000737
noncoding29708C29708TCT11AY.4.2.10.000149
noncoding29708C29708TCT11AY.4.40.000409
noncoding29708C29708TCT11AY.46.20.000635
noncoding29708C29708TCT11AY.5.10.003759
noncoding29708C29708TCT11AY.5.20.002463
noncoding29708C29708TCT11AY.5.40.000277
noncoding29708C29708TCT11AY.540.000095
noncoding29708C29708TCT11AY.550.000917
noncoding29708C29708TCT11AY.580.000907
noncoding29708C29708TCT11AY.670.000464
noncoding29708C29708TCT11AY.710.000475
noncoding29708C29708TCT11AY.790.001211
noncoding29708C29708TCT11AY.850.000427
noncoding29708C29708TCT11AY.90.000068
noncoding29708C29708TCT11AY.950.000761
noncoding29708C29708TCT11AY.990.001049
noncoding29708C29708TCT11AZ.10.000867
noncoding29708C29708TCT11B.1.1.10.000327
noncoding29708C29708TCT11B.1.1.120.007463
noncoding29708C29708TCT11B.1.1.1440.028571
noncoding29708C29708TCT11B.1.1.1940.00495
noncoding29708C29708TCT11B.1.1.2050.003717
noncoding29708C29708TCT11B.1.1.2070.001182
noncoding29708C29708TCT11B.1.1.2200.001859
noncoding29708C29708TCT11B.1.1.2320.001815
noncoding29708C29708TCT11B.1.1.2440.015385
noncoding29708C29708TCT11B.1.1.250.000569
noncoding29708C29708TCT11B.1.1.2770.000759
noncoding29708C29708TCT11B.1.1.2790.001121
noncoding29708C29708TCT11B.1.1.2940.001266
noncoding29708C29708TCT11B.1.1.2980.000862
noncoding29708C29708TCT11B.1.1.3010.001179
noncoding29708C29708TCT11B.1.1.3120.001912
noncoding29708C29708TCT11B.1.1.330.000421
noncoding29708C29708TCT11B.1.1.3540.004386
noncoding29708C29708TCT11B.1.1.3720.000689
noncoding29708C29708TCT11B.1.1.390.00051
noncoding29708C29708TCT11B.1.1.3910.008547
noncoding29708C29708TCT11B.1.1.4320.001266
noncoding29708C29708TCT11B.1.1.460.004367
noncoding29708C29708TCT11B.1.1.700.000341
noncoding29708C29708TCT11B.1.1190.010526
noncoding29708C29708TCT11B.1.160.330.004425
noncoding29708C29708TCT11B.1.177.230.003236
noncoding29708C29708TCT11B.1.177.40.000211
noncoding29708C29708TCT11B.1.177.530.002392
noncoding29708C29708TCT11B.1.177.800.001912
noncoding29708C29708TCT11B.1.177.820.000477
noncoding29708C29708TCT11B.1.2180.005155
noncoding29708C29708TCT11B.1.258.120.007874
noncoding29708C29708TCT11B.1.264.10.047619
noncoding29708C29708TCT11B.1.2650.001271
noncoding29708C29708TCT11B.1.2840.013158
noncoding29708C29708TCT11B.1.3140.007519
noncoding29708C29708TCT11B.1.3240.001605
noncoding29708C29708TCT11B.1.351.20.000303
noncoding29708C29708TCT11B.1.351.30.000876
noncoding29708C29708TCT11B.1.3800.006623
noncoding29708C29708TCT11B.1.3870.04
noncoding29708C29708TCT11B.1.4090.000781
noncoding29708C29708TCT11B.1.4230.010204
noncoding29708C29708TCT11B.1.4240.008065
noncoding29708C29708TCT11B.1.4260.001009
noncoding29708C29708TCT11B.1.4590.004082
noncoding29708C29708TCT11B.1.4620.007246
noncoding29708C29708TCT11B.1.4680.005714
noncoding29708C29708TCT11B.1.4690.00361
noncoding29708C29708TCT11B.1.4730.019231
noncoding29708C29708TCT11B.1.5010.007353
noncoding29708C29708TCT11B.1.5200.021739
noncoding29708C29708TCT11B.1.5210.004975
noncoding29708C29708TCT11B.1.5560.007519
noncoding29708C29708TCT11B.1.5600.00463
noncoding29708C29708TCT11B.1.564.10.001577
noncoding29708C29708TCT11B.1.5760.000907
noncoding29708C29708TCT11B.1.5880.00091
noncoding29708C29708TCT11B.1.6000.005848
noncoding29708C29708TCT11B.1.6180.004032
noncoding29708C29708TCT11B.1.619.10.000641
noncoding29708C29708TCT11B.1.6200.000946
noncoding29708C29708TCT11B.1.6250.002353
noncoding29708C29708TCT11B.1.6310.003367
noncoding29708C29708TCT11B.1.80.001972
noncoding29708C29708TCT11B.30.000831
noncoding29708C29708TCT11B.400.000364
noncoding29708C29708TCT11C.180.002591
noncoding29708C29708TCT11C.37.10.002618
noncoding29708C29708TCT11D.30.005917
noncoding29708C29708TCT11P.1.120.000484
noncoding29708C29708TCT11P.1.160.000374
noncoding29708C29708TCT11P.1.170.000162
noncoding29708C29708TCT11P.1.20.001156
noncoding29708C29708TCT11P.1.40.000977
noncoding29708C29708TCT11Q.40.000455