CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : Mut = C29686T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29686C29686TnoncodingCT88368836129686-29686

Details of the mutation C29686T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29686C29686TCT88368836All0.00169
noncoding29686C29686TCT15751575B.1.1.70.00141
noncoding29686C29686TCT10891089B.1.177.170.894089
noncoding29686C29686TCT546546B.1.10.009905
noncoding29686C29686TCT512512AY.440.003116
noncoding29686C29686TCT491491AY.40.000764
noncoding29686C29686TCT484484AY.330.032321
noncoding29686C29686TCT340340AY.1030.002111
noncoding29686C29686TCT279279AY.430.001236
noncoding29686C29686TCT275275B.1.617.20.001035
noncoding29686C29686TCT225225A.210.623269
noncoding29686C29686TCT219219AY.250.001317
noncoding29686C29686TCT192192B.1.1770.002528
noncoding29686C29686TCT173173AY.290.002729
noncoding29686C29686TCT132132B.1.5260.003103
noncoding29686C29686TCT116116B.1.177.810.021961
noncoding29686C29686TCT115115AY.1200.004276
noncoding29686C29686TCT109109B.1.20.00096
noncoding29686C29686TCT101101B.10.000925
noncoding29686C29686TCT7171AY.1020.001882
noncoding29686C29686TCT5959AY.470.001835
noncoding29686C29686TCT5252P.1.140.002486
noncoding29686C29686TCT5252P.1.170.008412
noncoding29686C29686TCT4848P.10.000756
noncoding29686C29686TCT4646B.1.5250.005205
noncoding29686C29686TCT4545AY.30.000448
noncoding29686C29686TCT4343B.1.438.40.914894
noncoding29686C29686TCT4242AY.60.001727
noncoding29686C29686TCT4040B.1.4290.000941
noncoding29686C29686TCT3838B.1.4270.001919
noncoding29686C29686TCT3434AY.4.20.000737
noncoding29686C29686TCT3434B.1.4000.014586
noncoding29686C29686TCT3232C.370.003714
noncoding29686C29686TCT2929AY.460.003018
noncoding29686C29686TCT2828B.1.177.380.291667
noncoding29686C29686TCT2727B.1.690.964286
noncoding29686C29686TCT2525AY.390.000618
noncoding29686C29686TCT2525AY.50.000516
noncoding29686C29686TCT2525B.1.3510.000743
noncoding29686C29686TCT2323B.1.1600.000717
noncoding29686C29686TCT2222AY.1180.001378
noncoding29686C29686TCT2222B.1.6370.001608
noncoding29686C29686TCT2222C.36.30.012479
noncoding29686C29686TCT2020B.1.1.5190.000794
noncoding29686C29686TCT1919AY.940.008411
noncoding29686C29686TCT1818AY.360.002668
noncoding29686C29686TCT1818B.1.1.2220.003672
noncoding29686C29686TCT1818B.1.3700.144
noncoding29686C29686TCT1717AY.120.005373
noncoding29686C29686TCT1717P.1.10.0054
noncoding29686C29686TCT1616AY.260.000453
noncoding29686C29686TCT1616AY.340.001551
noncoding29686C29686TCT1616AY.730.010645
noncoding29686C29686TCT1616B.1.1.3170.006587
noncoding29686C29686TCT1616B.1.2580.001065
noncoding29686C29686TCT1616B.1.6210.001416
noncoding29686C29686TCT1414P.20.002613
noncoding29686C29686TCT1313AY.1000.000598
noncoding29686C29686TCT1313AY.230.000907
noncoding29686C29686TCT1313B.1.1260.016582
noncoding29686C29686TCT1313B.1.3750.010656
noncoding29686C29686TCT1212AY.1170.001014
noncoding29686C29686TCT1212AY.130.001932
noncoding29686C29686TCT1212AY.39.10.000475
noncoding29686C29686TCT1212B.1.1.2140.000665
noncoding29686C29686TCT1212B.1.1.280.003735
noncoding29686C29686TCT1111AY.1060.003684
noncoding29686C29686TCT1111B.1.360.001605
noncoding29686C29686TCT1111B.1.36.260.031429
noncoding29686C29686TCT1111B.1.5960.000959
noncoding29686C29686TCT1010B.1.1.3060.004384
noncoding29686C29686TCT1010B.1.2210.00071
noncoding29686C29686TCT1010B.1.2430.000696
noncoding29686C29686TCT1010B.1.5820.004907
noncoding29686C29686TCT99AY.200.00035
noncoding29686C29686TCT99AY.450.001095
noncoding29686C29686TCT99AY.9.20.000331
noncoding29686C29686TCT99B.1.1.2980.007759
noncoding29686C29686TCT99B.1.177.540.005458
noncoding29686C29686TCT99B.1.617.10.001161
noncoding29686C29686TCT99N.40.038298
noncoding29686C29686TCT99P.1.150.002091
noncoding29686C29686TCT88AY.610.000838
noncoding29686C29686TCT88AY.99.20.000737
noncoding29686C29686TCT88B0.001022
noncoding29686C29686TCT88B.1.466.20.00313
noncoding29686C29686TCT77AY.1160.002007
noncoding29686C29686TCT77AY.750.000392
noncoding29686C29686TCT77B.1.438.10.000751
noncoding29686C29686TCT66A0.002322
noncoding29686C29686TCT66A.2.50.002994
noncoding29686C29686TCT66AY.46.50.00119
noncoding29686C29686TCT66AY.590.003178
noncoding29686C29686TCT66B.400.002186
noncoding29686C29686TCT66D.20.00045
noncoding29686C29686TCT66Q.80.000989
noncoding29686C29686TCT55AY.1130.000712
noncoding29686C29686TCT55AY.1190.000177
noncoding29686C29686TCT55AY.280.009452
noncoding29686C29686TCT55AY.4.2.10.000745
noncoding29686C29686TCT55AY.420.000201
noncoding29686C29686TCT55AY.5.30.001687
noncoding29686C29686TCT55AY.740.000578
noncoding29686C29686TCT55AY.75.10.000902
noncoding29686C29686TCT55B.1.1.2160.004452
noncoding29686C29686TCT55B.1.1.5230.007812
noncoding29686C29686TCT55B.1.177.600.001092
noncoding29686C29686TCT55B.1.2400.001078
noncoding29686C29686TCT55B.1.258.30.008375
noncoding29686C29686TCT55B.1.416.10.007812
noncoding29686C29686TCT55B.1.4380.03268
noncoding29686C29686TCT44A.190.037736
noncoding29686C29686TCT44AY.1110.000733
noncoding29686C29686TCT44AY.1210.000541
noncoding29686C29686TCT44AY.5.40.001107
noncoding29686C29686TCT44AY.510.003636
noncoding29686C29686TCT44AY.850.001709
noncoding29686C29686TCT44AY.890.019608
noncoding29686C29686TCT44AY.90.00027
noncoding29686C29686TCT44AY.980.000316
noncoding29686C29686TCT44B.1.1.1700.004988
noncoding29686C29686TCT44B.1.1.3160.0037
noncoding29686C29686TCT44B.1.36.160.005698
noncoding29686C29686TCT44B.1.36.290.002069
noncoding29686C29686TCT44B.1.5640.001704
noncoding29686C29686TCT44B.1.6280.001409
noncoding29686C29686TCT44P.1.160.001496
noncoding29686C29686TCT44P.1.70.001277
noncoding29686C29686TCT44Q.30.00058
noncoding29686C29686TCT33A.23.10.002113
noncoding29686C29686TCT33AU.20.007264
noncoding29686C29686TCT33AY.29.10.000662
noncoding29686C29686TCT33AY.690.00056
noncoding29686C29686TCT33AY.98.10.000145
noncoding29686C29686TCT33B.1.1.2650.009464
noncoding29686C29686TCT33B.1.1.4160.002715
noncoding29686C29686TCT33B.1.1.700.001023
noncoding29686C29686TCT33B.1.177.210.000229
noncoding29686C29686TCT33B.1.177.430.004431
noncoding29686C29686TCT33B.1.214.30.021429
noncoding29686C29686TCT33B.1.2340.000396
noncoding29686C29686TCT33B.1.36.380.004926
noncoding29686C29686TCT33B.1.5020.157895
noncoding29686C29686TCT22AY.1140.000462
noncoding29686C29686TCT22AY.116.10.000623
noncoding29686C29686TCT22AY.120.20.002571
noncoding29686C29686TCT22AY.20.000712
noncoding29686C29686TCT22AY.210.003795
noncoding29686C29686TCT22AY.240.000862
noncoding29686C29686TCT22AY.320.001065
noncoding29686C29686TCT22AY.4.50.000215
noncoding29686C29686TCT22AY.520.001629
noncoding29686C29686TCT22AY.530.000575
noncoding29686C29686TCT22AY.70.000392
noncoding29686C29686TCT22AY.7.10.000225
noncoding29686C29686TCT22AY.9.10.000167
noncoding29686C29686TCT22AY.920.000575
noncoding29686C29686TCT22B.1.1.10.000653
noncoding29686C29686TCT22B.1.1.1180.020408
noncoding29686C29686TCT22B.1.1.1530.002191
noncoding29686C29686TCT22B.1.1.1580.02439
noncoding29686C29686TCT22B.1.1.250.001137
noncoding29686C29686TCT22B.1.1.2690.002706
noncoding29686C29686TCT22B.1.1.2840.000215
noncoding29686C29686TCT22B.1.1.3110.000716
noncoding29686C29686TCT22B.1.1.500.001358
noncoding29686C29686TCT22B.1.110.30.001437
noncoding29686C29686TCT22B.1.160.260.004843
noncoding29686C29686TCT22B.1.177.750.002081
noncoding29686C29686TCT22B.1.2100.004264
noncoding29686C29686TCT22B.1.214.20.001199
noncoding29686C29686TCT22B.1.2670.037037
noncoding29686C29686TCT22B.1.2930.025
noncoding29686C29686TCT22B.1.3490.00143
noncoding29686C29686TCT22B.1.36.10.002281
noncoding29686C29686TCT22B.1.4370.041667
noncoding29686C29686TCT22B.1.4700.002809
noncoding29686C29686TCT22B.1.4800.004975
noncoding29686C29686TCT22B.1.5090.001732
noncoding29686C29686TCT22B.1.5750.000607
noncoding29686C29686TCT22B.1.5760.001813
noncoding29686C29686TCT22B.1.6090.000959
noncoding29686C29686TCT22B.1.6190.001742
noncoding29686C29686TCT22P.50.027397
noncoding29686C29686TCT11A.2.20.001689
noncoding29686C29686TCT11A.2.5.30.010309
noncoding29686C29686TCT11A.270.001656
noncoding29686C29686TCT11AU.10.001266
noncoding29686C29686TCT11AY.1040.001984
noncoding29686C29686TCT11AY.1100.000113
noncoding29686C29686TCT11AY.140.000088
noncoding29686C29686TCT11AY.16.10.00047
noncoding29686C29686TCT11AY.270.000065
noncoding29686C29686TCT11AY.370.000316
noncoding29686C29686TCT11AY.380.000499
noncoding29686C29686TCT11AY.39.1.10.000725
noncoding29686C29686TCT11AY.4.30.000842
noncoding29686C29686TCT11AY.4.40.000409
noncoding29686C29686TCT11AY.410.000294
noncoding29686C29686TCT11AY.46.20.000635
noncoding29686C29686TCT11AY.46.60.000072
noncoding29686C29686TCT11AY.490.003195
noncoding29686C29686TCT11AY.570.000656
noncoding29686C29686TCT11AY.620.000436
noncoding29686C29686TCT11AY.640.000595
noncoding29686C29686TCT11AY.680.000274
noncoding29686C29686TCT11AY.780.001541
noncoding29686C29686TCT11AY.790.001211
noncoding29686C29686TCT11AY.800.001129
noncoding29686C29686TCT11AY.820.001357
noncoding29686C29686TCT11AY.840.000437
noncoding29686C29686TCT11AY.900.000684
noncoding29686C29686TCT11AY.910.00073
noncoding29686C29686TCT11AY.950.000761
noncoding29686C29686TCT11B.1.1.1210.002427
noncoding29686C29686TCT11B.1.1.1440.028571
noncoding29686C29686TCT11B.1.1.1740.003378
noncoding29686C29686TCT11B.1.1.1960.005714
noncoding29686C29686TCT11B.1.1.2200.001859
noncoding29686C29686TCT11B.1.1.2260.005814
noncoding29686C29686TCT11B.1.1.2900.018182
noncoding29686C29686TCT11B.1.1.2910.000742
noncoding29686C29686TCT11B.1.1.2940.001266
noncoding29686C29686TCT11B.1.1.3040.002809
noncoding29686C29686TCT11B.1.1.3330.001076
noncoding29686C29686TCT11B.1.1.3480.000796
noncoding29686C29686TCT11B.1.1.3690.000446
noncoding29686C29686TCT11B.1.1.370.000193
noncoding29686C29686TCT11B.1.1.3720.000689
noncoding29686C29686TCT11B.1.1.3890.006061
noncoding29686C29686TCT11B.1.1.390.00051
noncoding29686C29686TCT11B.1.1.3910.008547
noncoding29686C29686TCT11B.1.1.4120.007634
noncoding29686C29686TCT11B.1.1.4200.001006
noncoding29686C29686TCT11B.1.1.440.00241
noncoding29686C29686TCT11B.1.1.4480.002033
noncoding29686C29686TCT11B.1.1.460.004367
noncoding29686C29686TCT11B.1.1.4620.008621
noncoding29686C29686TCT11B.1.1.5210.005348
noncoding29686C29686TCT11B.1.1.5250.005464
noncoding29686C29686TCT11B.1.1170.0125
noncoding29686C29686TCT11B.1.1280.000635
noncoding29686C29686TCT11B.1.1470.000756
noncoding29686C29686TCT11B.1.160.180.007299
noncoding29686C29686TCT11B.1.160.90.007194
noncoding29686C29686TCT11B.1.177.100.000878
noncoding29686C29686TCT11B.1.177.160.000664
noncoding29686C29686TCT11B.1.177.290.066667
noncoding29686C29686TCT11B.1.177.40.000211
noncoding29686C29686TCT11B.1.177.450.000381
noncoding29686C29686TCT11B.1.177.550.002331
noncoding29686C29686TCT11B.1.177.570.000281
noncoding29686C29686TCT11B.1.177.610.043478
noncoding29686C29686TCT11B.1.177.770.000726
noncoding29686C29686TCT11B.1.177.860.000183
noncoding29686C29686TCT11B.1.177.90.001332
noncoding29686C29686TCT11B.1.1920.009259
noncoding29686C29686TCT11B.1.2370.004975
noncoding29686C29686TCT11B.1.2600.003344
noncoding29686C29686TCT11B.1.2650.001271
noncoding29686C29686TCT11B.1.3110.000275
noncoding29686C29686TCT11B.1.3380.008621
noncoding29686C29686TCT11B.1.351.20.000303
noncoding29686C29686TCT11B.1.36.100.004785
noncoding29686C29686TCT11B.1.36.80.001
noncoding29686C29686TCT11B.1.3610.001289
noncoding29686C29686TCT11B.1.3670.000792
noncoding29686C29686TCT11B.1.3710.001122
noncoding29686C29686TCT11B.1.3960.000706
noncoding29686C29686TCT11B.1.3980.002976
noncoding29686C29686TCT11B.1.4110.003704
noncoding29686C29686TCT11B.1.4710.002732
noncoding29686C29686TCT11B.1.5010.007353
noncoding29686C29686TCT11B.1.5170.000427
noncoding29686C29686TCT11B.1.5330.009615
noncoding29686C29686TCT11B.1.5490.007194
noncoding29686C29686TCT11B.1.5500.013699
noncoding29686C29686TCT11B.1.5880.00091
noncoding29686C29686TCT11B.1.5950.000261
noncoding29686C29686TCT11B.1.617.30.002985
noncoding29686C29686TCT11B.1.6200.000946
noncoding29686C29686TCT11B.1.621.10.000506
noncoding29686C29686TCT11B.1.6230.000536
noncoding29686C29686TCT11B.1.6310.003367
noncoding29686C29686TCT11B.1.90.006173
noncoding29686C29686TCT11B.6.60.000889
noncoding29686C29686TCT11C.160.00106
noncoding29686C29686TCT11L.10.001905
noncoding29686C29686TCT11P.1.120.000484
noncoding29686C29686TCT11P.70.004367
noncoding29686C29686TCT11Q.70.001111
noncoding29686C29686TCT11R.10.00009