CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : Mut = C222T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding222C222TnoncodingCT60054600541222-222

Details of the mutation C222T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding222C222TCT6005460054All0.011486
noncoding222C222TCT2401324013B.1.1.5190.953578
noncoding222C222TCT65136513B.1.177.120.988016
noncoding222C222TCT53725372B.1.1770.070736
noncoding222C222TCT34863486B.1.1600.10872
noncoding222C222TCT29132913B.1.1.70.002608
noncoding222C222TCT17531753B.1.177.440.909704
noncoding222C222TCT13521352B.1.177.350.934347
noncoding222C222TCT10971097B.1.177.420.981216
noncoding222C222TCT986986AY.40.001535
noncoding222C222TCT825825AY.730.548902
noncoding222C222TCT739739P.10.011642
noncoding222C222TCT734734B.1.2210.052138
noncoding222C222TCT679679B.10.006219
noncoding222C222TCT633633B.1.177.430.935007
noncoding222C222TCT593593AY.440.003609
noncoding222C222TCT565565AY.250.003398
noncoding222C222TCT554554AY.60.022785
noncoding222C222TCT524524B.1.4270.026461
noncoding222C222TCT487487B.1.10.008835
noncoding222C222TCT445445B.1.617.20.001676
noncoding222C222TCT393393B.1.177.410.9825
noncoding222C222TCT385385AY.430.001706
noncoding222C222TCT359359B.1.20.003161
noncoding222C222TCT339339B.1.36.290.175375
noncoding222C222TCT201201C.160.21315
noncoding222C222TCT199199AY.260.005634
noncoding222C222TCT187187B.1.177.400.963918
noncoding222C222TCT136136AY.1030.000844
noncoding222C222TCT125125B.1.2430.008698
noncoding222C222TCT109109B.1.5260.002562
noncoding222C222TCT9494B.1.1.390.04791
noncoding222C222TCT9292AY.4.20.001995
noncoding222C222TCT9191AY.30.000905
noncoding222C222TCT9191B.1.177.380.947917
noncoding222C222TCT8181AY.90.005475
noncoding222C222TCT7373AY.200.002837
noncoding222C222TCT6666B.1.160.271
noncoding222C222TCT6565AY.50.001342
noncoding222C222TCT6262AY.470.001929
noncoding222C222TCT6262B.1.177.361
noncoding222C222TCT6060B.1.177.390.923077
noncoding222C222TCT6060B.1.2580.003993
noncoding222C222TCT5858AY.290.000915
noncoding222C222TCT5757B.1.160.300.169643
noncoding222C222TCT5656B.1.160.160.052045
noncoding222C222TCT5353AY.390.00131
noncoding222C222TCT5252B.1.4290.001224
noncoding222C222TCT5050AY.1020.001326
noncoding222C222TCT5050B.1.360.007295
noncoding222C222TCT4646B.1.1.2840.00494
noncoding222C222TCT4545B.1.1.1610.159011
noncoding222C222TCT4545B.1.258.170.004679
noncoding222C222TCT3939AY.1000.001794
noncoding222C222TCT3939B.1.2340.005146
noncoding222C222TCT3636B.1.1.2140.001996
noncoding222C222TCT3434P.1.120.016457
noncoding222C222TCT3333AY.330.002204
noncoding222C222TCT3333B.1.177.370.891892
noncoding222C222TCT3232B.1.1.2220.006528
noncoding222C222TCT3131AY.360.004595
noncoding222C222TCT3131B.1.5170.013237
noncoding222C222TCT3030AY.1190.001059
noncoding222C222TCT2727A.190.254717
noncoding222C222TCT2626B.1.1.3060.011399
noncoding222C222TCT2525B.1.177.190.035765
noncoding222C222TCT2525B.1.3510.000743
noncoding222C222TCT2323B.1.1.280.007158
noncoding222C222TCT2222B.1.1.4320.027848
noncoding222C222TCT2222C.360.020036
noncoding222C222TCT2121B.1.1310.184211
noncoding222C222TCT2121B.1.6210.001859
noncoding222C222TCT2020AY.1200.000744
noncoding222C222TCT2020C.370.002321
noncoding222C222TCT1919AY.930.005188
noncoding222C222TCT1818B.1.1.700.006139
noncoding222C222TCT1818P.1.70.005747
noncoding222C222TCT1717B.1.1.3170.006999
noncoding222C222TCT1717B.1.5960.001481
noncoding222C222TCT1717Q.80.002803
noncoding222C222TCT1616AY.1130.002278
noncoding222C222TCT1616B.1.177.210.001224
noncoding222C222TCT1616B.1.5610.006352
noncoding222C222TCT1515AY.450.001825
noncoding222C222TCT1515AY.530.004313
noncoding222C222TCT1515B.1.160.170.02551
noncoding222C222TCT1414A.10.003946
noncoding222C222TCT1414AY.210.026565
noncoding222C222TCT1414C.260.102941
noncoding222C222TCT1313AY.420.000523
noncoding222C222TCT1313AY.460.001353
noncoding222C222TCT1313AY.750.000728
noncoding222C222TCT1313B.1.1.2160.011576
noncoding222C222TCT1313P.20.002426
noncoding222C222TCT1313R.10.00117
noncoding222C222TCT1212AY.690.00224
noncoding222C222TCT1212AY.880.01061
noncoding222C222TCT1212AY.940.005312
noncoding222C222TCT1212B.1.1.3480.009554
noncoding222C222TCT1212B.1.177.60.011719
noncoding222C222TCT1212B.1.36.360.007225
noncoding222C222TCT1212B.1.36.80.012
noncoding222C222TCT1111A.2.50.005489
noncoding222C222TCT1111AY.20.003917
noncoding222C222TCT1111AY.800.012415
noncoding222C222TCT1111B.1.1.160.611111
noncoding222C222TCT1111B.1.1.630.004244
noncoding222C222TCT1111B.1.177.550.025641
noncoding222C222TCT1111B.1.3360.026829
noncoding222C222TCT1111B.1.4200.114583
noncoding222C222TCT1111B.1.438.10.00118
noncoding222C222TCT1111P.1.150.002556
noncoding222C222TCT1010AY.1170.000845
noncoding222C222TCT1010AY.9.20.000367
noncoding222C222TCT1010AY.980.00079
noncoding222C222TCT1010B0.001278
noncoding222C222TCT1010B.1.160.200.089286
noncoding222C222TCT99B.1.177.310.103448
noncoding222C222TCT99B.1.4990.009454
noncoding222C222TCT99B.1.5250.001018
noncoding222C222TCT99B.1.617.10.001161
noncoding222C222TCT99P.1.140.00043
noncoding222C222TCT88AY.270.000518
noncoding222C222TCT88B.1.1.3180.002414
noncoding222C222TCT88B.1.160.320.034335
noncoding222C222TCT88B.1.177.600.001747
noncoding222C222TCT88B.1.214.20.004796
noncoding222C222TCT88B.1.4280.008163
noncoding222C222TCT77AY.39.10.000277
noncoding222C222TCT77AY.4.2.10.001043
noncoding222C222TCT77AY.46.60.000505
noncoding222C222TCT77AY.610.000733
noncoding222C222TCT77B.1.1.2750.078652
noncoding222C222TCT77B.1.1.330.002946
noncoding222C222TCT77B.1.1.4340.00244
noncoding222C222TCT77B.1.1.5260.024823
noncoding222C222TCT77B.1.177.540.004245
noncoding222C222TCT77B.1.177.730.003964
noncoding222C222TCT77B.1.177.810.001325
noncoding222C222TCT77B.1.177.90.009321
noncoding222C222TCT77B.1.3110.001922
noncoding222C222TCT77B.1.416.10.010937
noncoding222C222TCT77C.36.30.003971
noncoding222C222TCT66AY.1060.002009
noncoding222C222TCT66AY.1140.001387
noncoding222C222TCT66AY.1180.000376
noncoding222C222TCT66AY.230.000418
noncoding222C222TCT66AY.29.10.001323
noncoding222C222TCT66AY.770.006764
noncoding222C222TCT66AY.98.10.000291
noncoding222C222TCT66B.1.1.10.00196
noncoding222C222TCT66B.1.1.2940.007595
noncoding222C222TCT66B.1.1.3720.004132
noncoding222C222TCT66B.1.1.4850.1
noncoding222C222TCT66B.1.177.80.004515
noncoding222C222TCT66B.1.36.180.002521
noncoding222C222TCT66B.1.3690.001711
noncoding222C222TCT66B.1.6280.002114
noncoding222C222TCT66C.350.004644
noncoding222C222TCT55AD.20.001095
noncoding222C222TCT55AY.620.002179
noncoding222C222TCT55AY.710.002375
noncoding222C222TCT55B.1.1.1530.005476
noncoding222C222TCT55B.1.1.2200.009294
noncoding222C222TCT55B.1.1.2880.009579
noncoding222C222TCT55B.1.1.3970.011261
noncoding222C222TCT55B.1.160.140.010593
noncoding222C222TCT55B.1.177.860.000917
noncoding222C222TCT55B.1.221.10.014535
noncoding222C222TCT55B.1.4040.00651
noncoding222C222TCT55B.1.4700.007022
noncoding222C222TCT55B.60.00455
noncoding222C222TCT55P.1.170.000809
noncoding222C222TCT44AY.1100.000451
noncoding222C222TCT44AY.370.001264
noncoding222C222TCT44AY.540.000381
noncoding222C222TCT44AY.840.00175
noncoding222C222TCT44AY.900.002738
noncoding222C222TCT44AY.99.20.000369
noncoding222C222TCT44B.1.1.1710.014706
noncoding222C222TCT44B.1.1.1740.013514
noncoding222C222TCT44B.1.1.1980.005874
noncoding222C222TCT44B.1.1.2800.012346
noncoding222C222TCT44B.1.1.3110.001433
noncoding222C222TCT44B.1.1.3750.047619
noncoding222C222TCT44B.1.110.30.002874
noncoding222C222TCT44B.1.1110.0047
noncoding222C222TCT44B.1.177.280.02963
noncoding222C222TCT44B.1.428.30.051282
noncoding222C222TCT44B.1.4780.047059
noncoding222C222TCT44B.1.5240.005626
noncoding222C222TCT44B.1.5760.003626
noncoding222C222TCT44D.20.0003
noncoding222C222TCT44P.1.20.004624
noncoding222C222TCT33A0.001161
noncoding222C222TCT33A.210.00831
noncoding222C222TCT33AY.120.000948
noncoding222C222TCT33AY.3.10.000256
noncoding222C222TCT33AY.4.40.001227
noncoding222C222TCT33AY.590.001589
noncoding222C222TCT33AY.670.001393
noncoding222C222TCT33AY.890.014706
noncoding222C222TCT33B.1.1.1600.071429
noncoding222C222TCT33B.1.1.3040.008427
noncoding222C222TCT33B.1.1.3160.002775
noncoding222C222TCT33B.1.1.370.000579
noncoding222C222TCT33B.1.160.150.014851
noncoding222C222TCT33B.1.177.40.000633
noncoding222C222TCT33B.1.36.190.027778
noncoding222C222TCT33B.1.3620.004622
noncoding222C222TCT33B.1.3750.002459
noncoding222C222TCT33B.1.4330.009585
noncoding222C222TCT33B.1.4650.011407
noncoding222C222TCT33B.1.466.20.001174
noncoding222C222TCT33B.1.5090.002597
noncoding222C222TCT33B.1.5330.028846
noncoding222C222TCT33B.1.5950.000783
noncoding222C222TCT33B.290.010526
noncoding222C222TCT22AU.10.002532
noncoding222C222TCT22AY.10.000791
noncoding222C222TCT22AY.1010.000981
noncoding222C222TCT22AY.1050.001286
noncoding222C222TCT22AY.1110.000366
noncoding222C222TCT22AY.1160.000574
noncoding222C222TCT22AY.116.10.000623
noncoding222C222TCT22AY.23.10.000835
noncoding222C222TCT22AY.300.000791
noncoding222C222TCT22AY.320.001065
noncoding222C222TCT22AY.4.30.001684
noncoding222C222TCT22AY.4.50.000215
noncoding222C222TCT22AY.46.30.001867
noncoding222C222TCT22AY.46.40.000329
noncoding222C222TCT22AY.5.30.000675
noncoding222C222TCT22AY.650.001066
noncoding222C222TCT22AY.680.000547
noncoding222C222TCT22AY.740.000231
noncoding222C222TCT22B.1.1.1250.020408
noncoding222C222TCT22B.1.1.1580.02439
noncoding222C222TCT22B.1.1.1860.006873
noncoding222C222TCT22B.1.1.2360.013793
noncoding222C222TCT22B.1.1.2610.017241
noncoding222C222TCT22B.1.1.2770.001517
noncoding222C222TCT22B.1.1.3220.017544
noncoding222C222TCT22B.1.1.3290.007692
noncoding222C222TCT22B.1.1.3510.005587
noncoding222C222TCT22B.1.1.3690.000892
noncoding222C222TCT22B.1.1.3740.004751
noncoding222C222TCT22B.1.1.4090.005666
noncoding222C222TCT22B.1.1.460.008734
noncoding222C222TCT22B.1.1.4620.017241
noncoding222C222TCT22B.1.1.500.001358
noncoding222C222TCT22B.1.1.540.006042
noncoding222C222TCT22B.1.1260.002551
noncoding222C222TCT22B.1.1470.001512
noncoding222C222TCT22B.1.160.100.016129
noncoding222C222TCT22B.1.160.330.00885
noncoding222C222TCT22B.1.177.230.006472
noncoding222C222TCT22B.1.177.520.003515
noncoding222C222TCT22B.1.177.620.002384
noncoding222C222TCT22B.1.177.650.001331
noncoding222C222TCT22B.1.177.70.00033
noncoding222C222TCT22B.1.177.770.001452
noncoding222C222TCT22B.1.177.820.000955
noncoding222C222TCT22B.1.2060.001631
noncoding222C222TCT22B.1.2100.004264
noncoding222C222TCT22B.1.2390.002442
noncoding222C222TCT22B.1.2400.000431
noncoding222C222TCT22B.1.2600.006689
noncoding222C222TCT22B.1.3200.002491
noncoding222C222TCT22B.1.3490.00143
noncoding222C222TCT22B.1.36.170.000988
noncoding222C222TCT22B.1.36.220.002415
noncoding222C222TCT22B.1.3960.001411
noncoding222C222TCT22B.1.3990.003868
noncoding222C222TCT22B.1.4070.071429
noncoding222C222TCT22B.1.4560.006536
noncoding222C222TCT22B.1.4600.035714
noncoding222C222TCT22B.1.466.10.014388
noncoding222C222TCT22B.1.4970.00063
noncoding222C222TCT22B.1.5300.014286
noncoding222C222TCT22B.1.5640.000852
noncoding222C222TCT22B.1.5800.00813
noncoding222C222TCT22B.1.5820.000981
noncoding222C222TCT22B.1.6370.000146
noncoding222C222TCT22B.100.016529
noncoding222C222TCT22N.50.003534
noncoding222C222TCT22Q.10.000253
noncoding222C222TCT11A.20.000662
noncoding222C222TCT11A.2.20.001689
noncoding222C222TCT11A.23.10.000704
noncoding222C222TCT11AB.10.008197
noncoding222C222TCT11AL.10.012987
noncoding222C222TCT11AN.10.02
noncoding222C222TCT11AY.100.00053
noncoding222C222TCT11AY.1080.001103
noncoding222C222TCT11AY.110.001339
noncoding222C222TCT11AY.120.20.001285
noncoding222C222TCT11AY.1210.000135
noncoding222C222TCT11AY.140.000088
noncoding222C222TCT11AY.16.10.00047
noncoding222C222TCT11AY.280.00189
noncoding222C222TCT11AY.340.000097
noncoding222C222TCT11AY.350.000233
noncoding222C222TCT11AY.39.20.001541
noncoding222C222TCT11AY.400.000964
noncoding222C222TCT11AY.490.003195
noncoding222C222TCT11AY.5.40.000277
noncoding222C222TCT11AY.570.000656
noncoding222C222TCT11AY.630.000387
noncoding222C222TCT11AY.700.000209
noncoding222C222TCT11AY.780.001541
noncoding222C222TCT11AY.790.001211
noncoding222C222TCT11AY.80.000606
noncoding222C222TCT11AY.910.00073
noncoding222C222TCT11AY.950.000761
noncoding222C222TCT11B.1.1.100.001115
noncoding222C222TCT11B.1.1.1210.002427
noncoding222C222TCT11B.1.1.1570.000913
noncoding222C222TCT11B.1.1.1700.001247
noncoding222C222TCT11B.1.1.1750.076923
noncoding222C222TCT11B.1.1.1760.000439
noncoding222C222TCT11B.1.1.1890.001513
noncoding222C222TCT11B.1.1.2210.010101
noncoding222C222TCT11B.1.1.2370.005405
noncoding222C222TCT11B.1.1.2410.00207
noncoding222C222TCT11B.1.1.2550.00303
noncoding222C222TCT11B.1.1.2670.010101
noncoding222C222TCT11B.1.1.2690.001353
noncoding222C222TCT11B.1.1.30.008696
noncoding222C222TCT11B.1.1.3070.002532
noncoding222C222TCT11B.1.1.3120.001912
noncoding222C222TCT11B.1.1.3560.008547
noncoding222C222TCT11B.1.1.3860.066667
noncoding222C222TCT11B.1.1.3870.058824
noncoding222C222TCT11B.1.1.4160.000905
noncoding222C222TCT11B.1.1.4200.001006
noncoding222C222TCT11B.1.1.4240.045455
noncoding222C222TCT11B.1.1.4610.012048
noncoding222C222TCT11B.1.1.4640.001473
noncoding222C222TCT11B.1.1.470.005348
noncoding222C222TCT11B.1.1.5070.008696
noncoding222C222TCT11B.1.1.5140.038462
noncoding222C222TCT11B.1.1.5150.02
noncoding222C222TCT11B.1.1.5210.005348
noncoding222C222TCT11B.1.1.5230.001563
noncoding222C222TCT11B.1.1.550.012987
noncoding222C222TCT11B.1.1.990.02381
noncoding222C222TCT11B.1.1240.007812
noncoding222C222TCT11B.1.1490.003425
noncoding222C222TCT11B.1.160.210.020408
noncoding222C222TCT11B.1.160.90.007194
noncoding222C222TCT11B.1.177.160.000664
noncoding222C222TCT11B.1.177.170.000821
noncoding222C222TCT11B.1.177.450.000381
noncoding222C222TCT11B.1.177.500.004695
noncoding222C222TCT11B.1.177.530.002392
noncoding222C222TCT11B.1.177.570.000281
noncoding222C222TCT11B.1.177.580.001332
noncoding222C222TCT11B.1.177.790.002342
noncoding222C222TCT11B.1.1890.004292
noncoding222C222TCT11B.1.2320.000537
noncoding222C222TCT11B.1.2330.014085
noncoding222C222TCT11B.1.2410.000812
noncoding222C222TCT11B.1.258.140.00098
noncoding222C222TCT11B.1.2790.000514
noncoding222C222TCT11B.1.30.002618
noncoding222C222TCT11B.1.3140.007519
noncoding222C222TCT11B.1.3330.010526
noncoding222C222TCT11B.1.3540.043478
noncoding222C222TCT11B.1.36.100.004785
noncoding222C222TCT11B.1.36.160.001425
noncoding222C222TCT11B.1.36.250.002208
noncoding222C222TCT11B.1.3610.001289
noncoding222C222TCT11B.1.3710.001122
noncoding222C222TCT11B.1.3910.001127
noncoding222C222TCT11B.1.4000.000429
noncoding222C222TCT11B.1.4050.012346
noncoding222C222TCT11B.1.4080.00369
noncoding222C222TCT11B.1.4110.003704
noncoding222C222TCT11B.1.4150.014286
noncoding222C222TCT11B.1.4220.000812
noncoding222C222TCT11B.1.4350.011364
noncoding222C222TCT11B.1.4620.007246
noncoding222C222TCT11B.1.4680.005714
noncoding222C222TCT11B.1.4730.019231
noncoding222C222TCT11B.1.4800.002488
noncoding222C222TCT11B.1.4980.020408
noncoding222C222TCT11B.1.5010.007353
noncoding222C222TCT11B.1.5200.021739
noncoding222C222TCT11B.1.5230.002451
noncoding222C222TCT11B.1.5370.02
noncoding222C222TCT11B.1.5400.009709
noncoding222C222TCT11B.1.5490.007194
noncoding222C222TCT11B.1.5510.00129
noncoding222C222TCT11B.1.5580.004566
noncoding222C222TCT11B.1.5630.016949
noncoding222C222TCT11B.1.5720.025
noncoding222C222TCT11B.1.5810.009434
noncoding222C222TCT11B.1.5880.00091
noncoding222C222TCT11B.1.5970.00463
noncoding222C222TCT11B.1.5990.00365
noncoding222C222TCT11B.1.6100.003546
noncoding222C222TCT11B.1.6120.002653
noncoding222C222TCT11B.1.6160.02439
noncoding222C222TCT11B.1.6200.000946
noncoding222C222TCT11B.1.621.10.000506
noncoding222C222TCT11B.1.6250.002353
noncoding222C222TCT11B.1.6270.00202
noncoding222C222TCT11B.1.90.006173
noncoding222C222TCT11B.1.930.000934
noncoding222C222TCT11B.4.10.018868
noncoding222C222TCT11B.400.000364
noncoding222C222TCT11B.6.60.000889
noncoding222C222TCT11C.10.002392
noncoding222C222TCT11C.230.005814
noncoding222C222TCT11C.36.3.10.002717
noncoding222C222TCT11C.400.027778
noncoding222C222TCT11N.40.004255
noncoding222C222TCT11P.1.100.000269
noncoding222C222TCT11P.1.10.10.00813
noncoding222C222TCT11P.1.130.000898
noncoding222C222TCT11P.1.160.000374
noncoding222C222TCT11Q.70.001111
noncoding222C222TCT11W.40.001351
noncoding222C222TCT11Z.10.00289