CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 66

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding66C66TnoncodingCT1096510965166-66
noncoding66C66AnoncodingCA11031103166-66
noncoding66C66-noncodingC-3131166-66
noncoding66C66GnoncodingCG2828166-66

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding66C66TCT1096510965All0.002097
noncoding66C66TCT45254525B.1.177.40.955044
noncoding66C66TCT13511351B.1.1.70.001209
noncoding66C66ACA11031103All0.000211
noncoding66C66TCT662662D.20.049677
noncoding66C66TCT606606AY.40.000943
noncoding66C66ACA435435B.1.1.2160.387355
noncoding66C66TCT295295B.1.617.20.001111
noncoding66C66TCT243243B.10.002226
noncoding66C66ACA223223B.1.5050.97807
noncoding66C66TCT204204B.1.20.001796
noncoding66C66TCT178178AY.260.005039
noncoding66C66TCT176176B.1.1770.002317
noncoding66C66TCT162162P.10.002552
noncoding66C66ACA107107B.10.00098
noncoding66C66TCT9292AY.430.000408
noncoding66C66TCT8585B.1.10.001542
noncoding66C66TCT8484B.1.3350.865979
noncoding66C66TCT8383AY.1020.002201
noncoding66C66TCT8282B.1.2650.104193
noncoding66C66TCT8181B.1.4290.001906
noncoding66C66TCT7777AY.360.011412
noncoding66C66TCT7676AY.440.000463
noncoding66C66ACA7272AY.40.000112
noncoding66C66ACA7272B.1.10.001306
noncoding66C66TCT6969AY.1030.000428
noncoding66C66TCT5858AY.250.000349
noncoding66C66TCT5757B.1.3510.001694
noncoding66C66ACA5555B.1.2580.00366
noncoding66C66TCT5353P.1.70.016922
noncoding66C66TCT5252AY.50.001074
noncoding66C66TCT5252B.1.1600.001622
noncoding66C66TCT5050B.1.6210.004426
noncoding66C66TCT4747B.1.2580.003128
noncoding66C66TCT4747B.1.3480.854545
noncoding66C66TCT4242AY.80.025455
noncoding66C66TCT3939B.1.1.3180.011768
noncoding66C66TCT3737AY.30.000368
noncoding66C66TCT3636P.30.057416
noncoding66C66TCT3333B.1.1.2790.036996
noncoding66C66TCT3333B.1.2430.002296
noncoding66C66TCT3333B.1.5960.002876
noncoding66C66-C-3131All0.000006
noncoding66C66TCT3131B.1.617.10.003998
noncoding66C66TCT3030B.1.177.820.01432
noncoding66C66TCT2929AY.750.001625
noncoding66C66GCG2828All0.000005
noncoding66C66TCT2828B.1.4080.103321
noncoding66C66TCT2727B.1.1.2140.001497
noncoding66C66TCT2626AY.1200.000967
noncoding66C66TCT2626AY.290.00041
noncoding66C66TCT2626B.1.2340.003431
noncoding66C66TCT2525AZ.20.020525
noncoding66C66TCT2525B.1.2210.001776
noncoding66C66TCT2323AY.46.60.001661
noncoding66C66TCT2121AY.390.000519
noncoding66C66TCT2020AY.200.000777
noncoding66C66TCT2020B.1.5260.00047
noncoding66C66ACA2020B.1.617.20.000075
noncoding66C66TCT1818B.1.1.5190.000715
noncoding66C66TCT1818B.1.466.20.007042
noncoding66C66TCT1717AY.4.20.000369
noncoding66C66TCT1717B.1.1.4340.005925
noncoding66C66TCT1717Q.80.002803
noncoding66C66TCT1616AY.1000.000736
noncoding66C66TCT1515AY.9.20.000551
noncoding66C66ACA1515B.1.4080.055351
noncoding66C66TCT1414AY.90.000946
noncoding66C66TCT1414AY.99.20.00129
noncoding66C66TCT1313B.1.5510.016774
noncoding66C66TCT1212AY.1190.000424
noncoding66C66ACA1212AY.430.000053
noncoding66C66TCT1212B.1.1.250.006822
noncoding66C66GCG1212B.1.1.70.000011
noncoding66C66TCT1111AY.920.00316
noncoding66C66ACA1111B.1.1.70.00001
noncoding66C66TCT1111B.1.3690.003137
noncoding66C66TCT1111C.370.001277
noncoding66C66TCT1111P.1.140.000526
noncoding66C66TCT1010AY.3.10.000853
noncoding66C66TCT1010AY.470.000311
noncoding66C66TCT99AY.420.000362
noncoding66C66TCT99B.1.1.3770.012431
noncoding66C66-C-99B.1.1.70.000008
noncoding66C66TCT99Q.10.001137
noncoding66C66TCT88AY.9.10.00067
noncoding66C66TCT88B.1.177.70.001319
noncoding66C66TCT88B.1.3620.012327
noncoding66C66TCT88B.1.4700.011236
noncoding66C66TCT88B.1.5170.003416
noncoding66C66TCT88B.1.5760.007253
noncoding66C66TCT88B.60.007279
noncoding66C66TCT77A.280.018519
noncoding66C66ACA77B.1.1.3050.027027
noncoding66C66TCT77B.1.360.001021
noncoding66C66TCT77B.350.054688
noncoding66C66TCT77P.20.001306
noncoding66C66TCT66AA.50.096774
noncoding66C66TCT66AY.1170.000507
noncoding66C66TCT66AY.140.000528
noncoding66C66TCT66AY.450.00073
noncoding66C66TCT66AY.5.40.00166
noncoding66C66TCT66B.1.1.630.002315
noncoding66C66TCT66B.1.177.120.00091
noncoding66C66TCT66B.1.4270.000303
noncoding66C66TCT66B.1.6280.002114
noncoding66C66TCT55AY.1080.005513
noncoding66C66TCT55AY.1110.000916
noncoding66C66TCT55AY.1180.000313
noncoding66C66ACA55AY.250.00003
noncoding66C66TCT55AY.300.001979
noncoding66C66TCT55AY.980.000395
noncoding66C66TCT55AY.98.10.000242
noncoding66C66TCT55B.1.1.500.003394
noncoding66C66-C-55B.1.1770.000066
noncoding66C66ACA55B.1.1770.000066
noncoding66C66TCT55B.1.177.210.000382
noncoding66C66TCT55B.1.177.810.000947
noncoding66C66TCT55B.1.5690.072464
noncoding66C66TCT44AD.20.000876
noncoding66C66TCT44AE.80.001956
noncoding66C66TCT44AY.230.000279
noncoding66C66TCT44AY.340.000388
noncoding66C66ACA44AY.470.000124
noncoding66C66TCT44AY.60.000165
noncoding66C66TCT44AY.780.006163
noncoding66C66TCT44AY.880.003537
noncoding66C66GCG44B.10.000037
noncoding66C66TCT44B.1.1.1920.009238
noncoding66C66TCT44B.1.1.2860.011594
noncoding66C66TCT44B.1.1.3060.001754
noncoding66C66TCT44B.1.1.3110.001433
noncoding66C66TCT44B.1.1.4370.041667
noncoding66C66ACA44B.1.20.000035
noncoding66C66TCT44B.1.4690.01444
noncoding66C66TCT44B.1.4990.004202
noncoding66C66TCT44B.1.575.10.009756
noncoding66C66TCT44B.1.6190.003484
noncoding66C66TCT44B.1.6370.000292
noncoding66C66TCT33AY.1140.000693
noncoding66C66TCT33AY.116.10.000934
noncoding66C66TCT33AY.1210.000406
noncoding66C66TCT33AY.130.000483
noncoding66C66TCT33AY.29.10.000662
noncoding66C66TCT33AY.4.2.10.000447
noncoding66C66TCT33AY.610.000314
noncoding66C66TCT33AY.730.001996
noncoding66C66TCT33B.1.1.1890.004539
noncoding66C66TCT33B.1.1.280.000934
noncoding66C66TCT33B.1.1.4280.028302
noncoding66C66TCT33B.1.160.320.012876
noncoding66C66TCT33B.1.177.350.002073
noncoding66C66TCT33B.1.177.600.000655
noncoding66C66ACA33B.1.2430.000209
noncoding66C66TCT33B.1.258.170.000312
noncoding66C66TCT33B.1.3110.000824
noncoding66C66TCT33B.1.4590.012245
noncoding66C66TCT33B.1.4740.005703
noncoding66C66GCG33B.1.5250.000339
noncoding66C66TCT33B.1.5740.006452
noncoding66C66TCT33B.1.5820.001472
noncoding66C66TCT33P.1.120.001452
noncoding66C66TCT33P.1.170.000485
noncoding66C66TCT33W.30.015789
noncoding66C66TCT22AY.1050.001286
noncoding66C66TCT22AY.1060.00067
noncoding66C66TCT22AY.1070.000932
noncoding66C66TCT22AY.1130.000285
noncoding66C66TCT22AY.23.10.000835
noncoding66C66TCT22AY.270.000129
noncoding66C66TCT22AY.380.000999
noncoding66C66ACA22AY.390.000049
noncoding66C66TCT22AY.39.10.000079
noncoding66C66TCT22AY.4.10.001475
noncoding66C66TCT22AY.4.40.000818
noncoding66C66TCT22AY.4.50.000215
noncoding66C66TCT22AY.400.001929
noncoding66C66TCT22AY.460.000208
noncoding66C66TCT22AY.5.30.000675
noncoding66C66TCT22AY.550.001835
noncoding66C66TCT22AY.560.00321
noncoding66C66ACA22AY.60.000082
noncoding66C66TCT22AY.650.001066
noncoding66C66TCT22AY.710.00095
noncoding66C66TCT22AY.720.002721
noncoding66C66TCT22AY.990.002099
noncoding66C66TCT22B0.000256
noncoding66C66TCT22B.1.1.1600.047619
noncoding66C66TCT22B.1.1.2220.000408
noncoding66C66-C-22B.1.1.330.000842
noncoding66C66TCT22B.1.1.3330.002153
noncoding66C66TCT22B.1.1.3850.008929
noncoding66C66TCT22B.1.1.4060.012987
noncoding66C66TCT22B.1.1.5280.009615
noncoding66C66TCT22B.1.1670.015625
noncoding66C66TCT22B.1.177.440.001038
noncoding66C66ACA22B.1.177.440.001038
noncoding66C66TCT22B.1.177.460.001837
noncoding66C66TCT22B.1.177.560.001335
noncoding66C66TCT22B.1.177.750.002081
noncoding66C66TCT22B.1.177.860.000367
noncoding66C66ACA22B.1.2140.007326
noncoding66C66TCT22B.1.2320.001075
noncoding66C66TCT22B.1.2410.001623
noncoding66C66-C-22B.1.2580.000133
noncoding66C66TCT22B.1.3360.004878
noncoding66C66TCT22B.1.36.10.002281
noncoding66C66TCT22B.1.36.290.001035
noncoding66C66TCT22B.1.36.80.002
noncoding66C66TCT22B.1.3700.016
noncoding66C66TCT22B.1.3990.003868
noncoding66C66TCT22B.1.4040.002604
noncoding66C66TCT22B.1.4220.001625
noncoding66C66TCT22B.1.438.10.000215
noncoding66C66TCT22B.1.5380.016129
noncoding66C66TCT22B.1.5410.00885
noncoding66C66TCT22B.1.5750.000607
noncoding66C66TCT22B.1.80.003945
noncoding66C66TCT22C.160.002121
noncoding66C66ACA22D.20.00015
noncoding66C66TCT22N.50.003534
noncoding66C66TCT22P.1.10.000635
noncoding66C66TCT22P.1.100.000539
noncoding66C66-C-22P.20.000373
noncoding66C66TCT22P.40.007605
noncoding66C66TCT22P.60.006289
noncoding66C66TCT22Q.30.00029
noncoding66C66TCT22R.20.028986
noncoding66C66TCT11A0.000387
noncoding66C66TCT11A.10.000282
noncoding66C66TCT11A.2.50.000499
noncoding66C66TCT11A.290.005319
noncoding66C66ACA11AY.1020.000027
noncoding66C66ACA11AY.1030.000006
noncoding66C66TCT11AY.1090.00074
noncoding66C66TCT11AY.110.001339
noncoding66C66TCT11AY.1160.000287
noncoding66C66ACA11AY.1170.000085
noncoding66C66-C-11AY.1190.000035
noncoding66C66TCT11AY.160.00038
noncoding66C66TCT11AY.16.10.00047
noncoding66C66TCT11AY.190.00114
noncoding66C66ACA11AY.200.000039
noncoding66C66ACA11AY.230.00007
noncoding66C66TCT11AY.240.000431
noncoding66C66GCG11AY.260.000028
noncoding66C66ACA11AY.290.000016
noncoding66C66ACA11AY.30.00001
noncoding66C66TCT11AY.320.000532
noncoding66C66TCT11AY.330.000067
noncoding66C66ACA11AY.330.000067
noncoding66C66TCT11AY.34.10.00051
noncoding66C66TCT11AY.350.000233
noncoding66C66-C-11AY.370.000316
noncoding66C66TCT11AY.370.000316
noncoding66C66ACA11AY.39.10.00004
noncoding66C66GCG11AY.40.000002
noncoding66C66ACA11AY.4.20.000022
noncoding66C66TCT11AY.410.000294
noncoding66C66ACA11AY.420.00004
noncoding66C66ACA11AY.440.000006
noncoding66C66TCT11AY.46.20.000635
noncoding66C66ACA11AY.46.20.000635
noncoding66C66TCT11AY.46.40.000165
noncoding66C66TCT11AY.520.000814
noncoding66C66TCT11AY.580.000907
noncoding66C66ACA11AY.590.00053
noncoding66C66TCT11AY.630.000387
noncoding66C66TCT11AY.640.000595
noncoding66C66TCT11AY.670.000464
noncoding66C66TCT11AY.680.000274
noncoding66C66TCT11AY.690.000187
noncoding66C66TCT11AY.7.20.000559
noncoding66C66TCT11AY.740.000116
noncoding66C66TCT11AY.790.001211
noncoding66C66TCT11AY.890.004902
noncoding66C66TCT11AY.900.000684
noncoding66C66TCT11AY.910.00073
noncoding66C66ACA11AY.940.000443
noncoding66C66ACA11AY.980.000079
noncoding66C66TCT11AY.99.10.001553
noncoding66C66TCT11AZ.10.000867
noncoding66C66GCG11B0.000128
noncoding66C66ACA11B0.000128
noncoding66C66-C-11B.10.000009
noncoding66C66ACA11B.1.1.1370.0125
noncoding66C66-C-11B.1.1.1700.001247
noncoding66C66TCT11B.1.1.2100.005714
noncoding66C66TCT11B.1.1.2160.00089
noncoding66C66TCT11B.1.1.2190.005
noncoding66C66ACA11B.1.1.2280.003049
noncoding66C66TCT11B.1.1.2370.005405
noncoding66C66ACA11B.1.1.2610.008621
noncoding66C66TCT11B.1.1.2650.003155
noncoding66C66ACA11B.1.1.2790.001121
noncoding66C66ACA11B.1.1.280.000311
noncoding66C66TCT11B.1.1.2840.000107
noncoding66C66TCT11B.1.1.2850.006536
noncoding66C66-C-11B.1.1.2940.001266
noncoding66C66ACA11B.1.1.3060.000438
noncoding66C66-C-11B.1.1.3120.001912
noncoding66C66TCT11B.1.1.3160.000925
noncoding66C66TCT11B.1.1.3170.000412
noncoding66C66ACA11B.1.1.3170.000412
noncoding66C66-C-11B.1.1.3220.008772
noncoding66C66-C-11B.1.1.3480.000796
noncoding66C66TCT11B.1.1.3690.000446
noncoding66C66TCT11B.1.1.370.000193
noncoding66C66TCT11B.1.1.390.00051
noncoding66C66ACA11B.1.1.3970.002252
noncoding66C66TCT11B.1.1.4160.000905
noncoding66C66ACA11B.1.1.4190.007407
noncoding66C66TCT11B.1.1.480.002874
noncoding66C66GCG11B.1.1.5190.00004
noncoding66C66ACA11B.1.1.5190.00004
noncoding66C66TCT11B.1.1280.000635
noncoding66C66TCT11B.1.1400.018868
noncoding66C66TCT11B.1.1470.000756
noncoding66C66TCT11B.1.160.120.00641
noncoding66C66ACA11B.1.160.300.002976
noncoding66C66TCT11B.1.160.310.008065
noncoding66C66TCT11B.1.177.100.000878
noncoding66C66-C-11B.1.177.100.000878
noncoding66C66TCT11B.1.177.150.000631
noncoding66C66TCT11B.1.177.470.012987
noncoding66C66TCT11B.1.177.50.001242
noncoding66C66TCT11B.1.177.580.001332
noncoding66C66TCT11B.1.177.620.001192
noncoding66C66TCT11B.1.177.730.000566
noncoding66C66TCT11B.1.177.830.001481
noncoding66C66TCT11B.1.1890.004292
noncoding66C66TCT11B.1.1920.009259
noncoding66C66TCT11B.1.1950.005025
noncoding66C66TCT11B.1.2060.000816
noncoding66C66TCT11B.1.214.20.0006
noncoding66C66TCT11B.1.2150.009615
noncoding66C66GCG11B.1.2210.000071
noncoding66C66TCT11B.1.2400.000216
noncoding66C66TCT11B.1.258.160.001637
noncoding66C66TCT11B.1.3290.000608
noncoding66C66TCT11B.1.351.20.000303
noncoding66C66TCT11B.1.3560.001727
noncoding66C66TCT11B.1.36.170.000494
noncoding66C66ACA11B.1.36.220.001208
noncoding66C66TCT11B.1.36.390.002217
noncoding66C66TCT11B.1.36.70.004
noncoding66C66-C-11B.1.36.80.001
noncoding66C66TCT11B.1.3670.000792
noncoding66C66TCT11B.1.3850.010638
noncoding66C66ACA11B.1.3890.001002
noncoding66C66TCT11B.1.3890.001002
noncoding66C66ACA11B.1.3910.001127
noncoding66C66TCT11B.1.3960.000706
noncoding66C66ACA11B.1.3980.002976
noncoding66C66TCT11B.1.4160.001269
noncoding66C66GCG11B.1.4270.00005
noncoding66C66TCT11B.1.4370.020833
noncoding66C66ACA11B.1.4520.013699
noncoding66C66ACA11B.1.4560.003268
noncoding66C66ACA11B.1.5040.03125
noncoding66C66ACA11B.1.5100.026316
noncoding66C66TCT11B.1.5210.004975
noncoding66C66TCT11B.1.5250.000113
noncoding66C66-C-11B.1.5250.000113
noncoding66C66ACA11B.1.5270.003704
noncoding66C66TCT11B.1.5400.009709
noncoding66C66TCT11B.1.5460.003704
noncoding66C66TCT11B.1.5610.000397
noncoding66C66ACA11B.1.5750.000303
noncoding66C66ACA11B.1.6090.000479
noncoding66C66GCG11B.1.617.20.000004
noncoding66C66TCT11B.1.6230.000536
noncoding66C66TCT11B.1.6340.003425
noncoding66C66GCG11B.1.6360.006711
noncoding66C66ACA11B.1.6370.000073
noncoding66C66TCT11B.1.6380.052632
noncoding66C66ACA11B.1.780.008547
noncoding66C66TCT11B.1.930.000934
noncoding66C66ACA11B.1.930.000934
noncoding66C66TCT11B.40.002208
noncoding66C66TCT11B.400.000364
noncoding66C66GCG11B.60.00091
noncoding66C66ACA11B.6.40.045455
noncoding66C66TCT11C.10.002392
noncoding66C66TCT11C.250.125
noncoding66C66TCT11C.36.30.000567
noncoding66C66TCT11P.1.150.000232
noncoding66C66TCT11R.10.00009