CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 64

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding64C64TnoncodingCT50735073164-64
noncoding64C64AnoncodingCA230230164-64
noncoding64C64-noncodingC-2929164-64
noncoding64C64GnoncodingCG1717164-64

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding64C64TCT50735073All0.00097
noncoding64C64TCT24332433AY.700.507298
noncoding64C64TCT453453B.1.617.20.001706
noncoding64C64TCT301301AY.40.000468
noncoding64C64TCT258258B.1.1.70.000231
noncoding64C64TCT235235AY.250.001413
noncoding64C64ACA230230All0.000044
noncoding64C64TCT185185AY.1020.004905
noncoding64C64TCT148148AY.430.000656
noncoding64C64TCT6767AY.440.000408
noncoding64C64TCT6464B.1.177.210.004894
noncoding64C64TCT5858AY.390.001433
noncoding64C64ACA5252AY.40.000081
noncoding64C64TCT5151AY.1030.000317
noncoding64C64TCT4242AY.1200.001562
noncoding64C64TCT4040B.1.177.440.020758
noncoding64C64TCT3939B.1.20.000343
noncoding64C64TCT3737B.1.1770.000487
noncoding64C64TCT3737B.1.177.650.024617
noncoding64C64TCT3131B.1.1.5190.001231
noncoding64C64TCT3030B.10.000275
noncoding64C64-C-2929All0.000006
noncoding64C64TCT2727B.1.10.00049
noncoding64C64ACA2626AY.250.000156
noncoding64C64ACA2222B.1.617.20.000083
noncoding64C64TCT1818AY.780.027735
noncoding64C64TCT1818C.350.013932
noncoding64C64GCG1717All0.000003
noncoding64C64ACA1717AY.1030.000106
noncoding64C64TCT1717AY.1070.007922
noncoding64C64TCT1717B.1.1.390.008665
noncoding64C64TCT1717B.1.1600.00053
noncoding64C64TCT1515B.1.6370.001096
noncoding64C64TCT1414AY.730.009315
noncoding64C64TCT1313AY.470.000404
noncoding64C64ACA1313B.1.1.70.000012
noncoding64C64TCT1313B.1.438.10.001394
noncoding64C64TCT1212AY.30.000119
noncoding64C64TCT1212B.1.177.160.007973
noncoding64C64TCT1212B.1.5960.001046
noncoding64C64TCT1111AY.420.000443
noncoding64C64ACA1010AY.440.000061
noncoding64C64TCT1010AY.50.000206
noncoding64C64TCT1010P.10.000158
noncoding64C64ACA99AY.260.000255
noncoding64C64ACA99AY.290.000142
noncoding64C64-C-99B.1.1.70.000008
noncoding64C64TCT88AY.230.000558
noncoding64C64TCT88AY.260.000226
noncoding64C64TCT88AY.290.000126
noncoding64C64TCT88AY.460.000833
noncoding64C64TCT88AY.560.012841
noncoding64C64TCT88B.1.3510.000238
noncoding64C64TCT77AY.1160.002007
noncoding64C64TCT77AY.46.60.000505
noncoding64C64TCT77B.1.1.3060.003069
noncoding64C64TCT77B.1.1.4320.008861
noncoding64C64TCT77B.1.2400.001509
noncoding64C64TCT77R.10.00063
noncoding64C64ACA66AY.1000.000276
noncoding64C64TCT66AY.1000.000276
noncoding64C64GCG66AY.30.00006
noncoding64C64TCT66AY.5.30.002024
noncoding64C64ACA66B.10.000055
noncoding64C64TCT66B.1.1.2160.005343
noncoding64C64TCT66B.1.220.007905
noncoding64C64TCT66B.1.4290.000141
noncoding64C64TCT66P.20.00112
noncoding64C64TCT55AY.1170.000423
noncoding64C64TCT55AY.200.000194
noncoding64C64ACA55AY.230.000349
noncoding64C64TCT55AY.330.000334
noncoding64C64ACA55AY.430.000022
noncoding64C64TCT55B.1.1.2220.00102
noncoding64C64-C-55B.1.1770.000066
noncoding64C64TCT55B.1.5260.000118
noncoding64C64TCT44AY.1080.00441
noncoding64C64ACA44AY.1090.002959
noncoding64C64TCT44AY.1190.000141
noncoding64C64TCT44AY.480.00186
noncoding64C64TCT44AY.9.10.000335
noncoding64C64TCT44B.1.177.810.000757
noncoding64C64TCT44B.1.2580.000266
noncoding64C64TCT44B.1.360.000584
noncoding64C64TCT33A.2.5.30.030928
noncoding64C64TCT33AN.10.06
noncoding64C64TCT33AY.39.20.004622
noncoding64C64TCT33AY.4.20.000065
noncoding64C64TCT33AY.4.40.001227
noncoding64C64TCT33AY.450.000365
noncoding64C64TCT33AY.5.40.00083
noncoding64C64TCT33AY.540.000286
noncoding64C64TCT33AY.9.20.00011
noncoding64C64TCT33AY.980.000237
noncoding64C64TCT33B.1.1.3170.001235
noncoding64C64ACA33B.1.1770.00004
noncoding64C64TCT33B.1.3960.002117
noncoding64C64TCT33B.1.4090.002344
noncoding64C64TCT33P.1.140.000143
noncoding64C64ACA22AY.1020.000053
noncoding64C64ACA22AY.30.00002
noncoding64C64ACA22AY.4.20.000043
noncoding64C64TCT22AY.4.2.10.000298
noncoding64C64TCT22AY.4.50.000215
noncoding64C64TCT22AY.410.000588
noncoding64C64ACA22AY.520.001629
noncoding64C64TCT22AY.530.000575
noncoding64C64TCT22AY.610.00021
noncoding64C64ACA22AY.9.20.000073
noncoding64C64TCT22AY.920.000575
noncoding64C64TCT22B.1.1.3260.003521
noncoding64C64-C-22B.1.1.330.000842
noncoding64C64TCT22B.1.1.500.001358
noncoding64C64TCT22B.1.160.300.005952
noncoding64C64TCT22B.1.177.730.001133
noncoding64C64GCG22B.1.177.830.002963
noncoding64C64TCT22B.1.177.860.000367
noncoding64C64TCT22B.1.2210.000142
noncoding64C64TCT22B.1.2340.000264
noncoding64C64TCT22B.1.2390.002442
noncoding64C64TCT22B.1.258.170.000208
noncoding64C64ACA22B.1.3510.000059
noncoding64C64TCT22B.1.3690.00057
noncoding64C64TCT22B.1.4000.000858
noncoding64C64TCT22B.1.4280.002041
noncoding64C64TCT22B.1.4330.00639
noncoding64C64TCT22B.1.4480.005249
noncoding64C64TCT22B.1.617.10.000258
noncoding64C64-C-22P.20.000373
noncoding64C64TCT22P.40.007605
noncoding64C64ACA11A0.000387
noncoding64C64TCT11AD.20.000219
noncoding64C64TCT11AY.100.00053
noncoding64C64TCT11AY.1110.000183
noncoding64C64TCT11AY.1130.000142
noncoding64C64ACA11AY.1190.000035
noncoding64C64ACA11AY.120.000316
noncoding64C64TCT11AY.120.000316
noncoding64C64ACA11AY.1200.000037
noncoding64C64TCT11AY.120.10.000321
noncoding64C64TCT11AY.1210.000135
noncoding64C64ACA11AY.130.000161
noncoding64C64TCT11AY.140.000088
noncoding64C64TCT11AY.16.10.00047
noncoding64C64ACA11AY.23.10.000417
noncoding64C64TCT11AY.270.000065
noncoding64C64GCG11AY.290.000016
noncoding64C64ACA11AY.330.000067
noncoding64C64ACA11AY.34.10.00051
noncoding64C64TCT11AY.34.10.00051
noncoding64C64GCG11AY.370.000316
noncoding64C64-C-11AY.370.000316
noncoding64C64ACA11AY.390.000025
noncoding64C64TCT11AY.39.10.00004
noncoding64C64ACA11AY.420.00004
noncoding64C64TCT11AY.46.30.000934
noncoding64C64ACA11AY.470.000031
noncoding64C64ACA11AY.530.000288
noncoding64C64TCT11AY.60.000041
noncoding64C64GCG11AY.620.000436
noncoding64C64TCT11AY.620.000436
noncoding64C64TCT11AY.670.000464
noncoding64C64TCT11AY.680.000274
noncoding64C64ACA11AY.70.000196
noncoding64C64TCT11AY.7.10.000113
noncoding64C64ACA11AY.750.000056
noncoding64C64ACA11AY.75.10.00018
noncoding64C64TCT11AY.770.001127
noncoding64C64ACA11AY.840.000437
noncoding64C64TCT11AY.840.000437
noncoding64C64TCT11AY.850.000427
noncoding64C64TCT11AY.880.000884
noncoding64C64ACA11AY.90.000068
noncoding64C64TCT11AY.90.000068
noncoding64C64GCG11AY.9.20.000037
noncoding64C64TCT11AY.950.000761
noncoding64C64ACA11AY.980.000079
noncoding64C64TCT11AY.98.10.000048
noncoding64C64TCT11AY.990.001049
noncoding64C64ACA11B0.000128
noncoding64C64GCG11B0.000128
noncoding64C64-C-11B.10.000009
noncoding64C64ACA11B.1.10.000018
noncoding64C64TCT11B.1.1.10.000327
noncoding64C64ACA11B.1.1.1390.022727
noncoding64C64-C-11B.1.1.1700.001247
noncoding64C64TCT11B.1.1.2140.000055
noncoding64C64TCT11B.1.1.280.000311
noncoding64C64-C-11B.1.1.2940.001266
noncoding64C64TCT11B.1.1.3110.000358
noncoding64C64-C-11B.1.1.3120.001912
noncoding64C64TCT11B.1.1.3180.000302
noncoding64C64-C-11B.1.1.3220.008772
noncoding64C64-C-11B.1.1.3480.000796
noncoding64C64TCT11B.1.1.4130.006897
noncoding64C64TCT11B.1.1.4340.000349
noncoding64C64ACA11B.1.1.4500.034483
noncoding64C64TCT11B.1.1.460.004367
noncoding64C64TCT11B.1.1.5130.012346
noncoding64C64TCT11B.1.1.5250.005464
noncoding64C64GCG11B.1.1.70.000001
noncoding64C64TCT11B.1.1040.00369
noncoding64C64TCT11B.1.1110.001175
noncoding64C64TCT11B.1.177.430.001477
noncoding64C64TCT11B.1.177.460.000918
noncoding64C64ACA11B.1.177.80.000752
noncoding64C64TCT11B.1.177.90.001332
noncoding64C64TCT11B.1.2230.002778
noncoding64C64-C-11B.1.2580.000067
noncoding64C64ACA11B.1.3010.005917
noncoding64C64ACA11B.1.3110.000275
noncoding64C64TCT11B.1.3200.001245
noncoding64C64TCT11B.1.3240.001605
noncoding64C64ACA11B.1.351.30.000876
noncoding64C64TCT11B.1.36.260.002857
noncoding64C64TCT11B.1.36.290.000517
noncoding64C64TCT11B.1.36.380.001642
noncoding64C64-C-11B.1.36.80.001
noncoding64C64TCT11B.1.3770.004566
noncoding64C64TCT11B.1.4270.00005
noncoding64C64ACA11B.1.4290.000024
noncoding64C64GCG11B.1.4290.000024
noncoding64C64TCT11B.1.440.008333
noncoding64C64TCT11B.1.4660.023256
noncoding64C64ACA11B.1.5150.014493
noncoding64C64-C-11B.1.5250.000113
noncoding64C64TCT11B.1.5250.000113
noncoding64C64TCT11B.1.5950.000261
noncoding64C64ACA11B.1.6090.000479
noncoding64C64-C-11B.1.617.20.000004
noncoding64C64TCT11B.1.930.000934
noncoding64C64TCT11B.330.021277
noncoding64C64TCT11B.40.002208
noncoding64C64TCT11B.400.000364
noncoding64C64TCT11B.500.111111
noncoding64C64GCG11B.60.00091
noncoding64C64ACA11C.36.30.000567
noncoding64C64TCT11C.370.000116
noncoding64C64ACA11D.20.000075
noncoding64C64GCG11P.10.000016
noncoding64C64TCT11P.1.100.000269
noncoding64C64TCT11P.1.10.10.00813
noncoding64C64TCT11P.1.70.000319
noncoding64C64TCT11Q.80.000165