CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29838

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29838C29838TnoncodingCT22532253129838-29838
noncoding29838C29838-noncodingC-11771177129838-29838
noncoding29838C29838AnoncodingCA365365129838-29838
noncoding29838C29838GnoncodingCG9191129838-29838
noncoding29838C29838WnoncodingCW4646129838-29838
noncoding29838C29838HnoncodingCH1313129838-29838
noncoding29838C29838DnoncodingCD44129838-29838
noncoding29838C29838VnoncodingCV11129838-29838
noncoding29838C29838KnoncodingCK11129838-29838
noncoding29838C29838RnoncodingCR11129838-29838
noncoding29838C29838BnoncodingCB11129838-29838

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29838C29838TCT22532253All0.000431
noncoding29838C29838-C-11771177All0.000225
noncoding29838C29838-C-747747B.1.1.70.000669
noncoding29838C29838TCT635635B.1.1.3330.683531
noncoding29838C29838ACA365365All0.00007
noncoding29838C29838TCT253253B.1.1.70.000226
noncoding29838C29838TCT168168B.1.1770.002212
noncoding29838C29838TCT123123AY.1030.000764
noncoding29838C29838GCG9191All0.000017
noncoding29838C29838TCT8989B.10.000815
noncoding29838C29838TCT8686B.1.617.20.000324
noncoding29838C29838ACA8282B.1.1.70.000073
noncoding29838C29838TCT7878B.1.20.000687
noncoding29838C29838TCT7070P.10.001103
noncoding29838C29838TCT6969AY.40.000107
noncoding29838C29838TCT6464AY.440.00039
noncoding29838C29838TCT5454AY.580.049002
noncoding29838C29838ACA5252B.10.000476
noncoding29838C29838WCW4646All0.000009
noncoding29838C29838TCT4444AY.430.000195
noncoding29838C29838TCT4040AY.250.000241
noncoding29838C29838GCG4040B.1.1.70.000036
noncoding29838C29838WCW3939B.1.1.70.000035
noncoding29838C29838-C-3434AZ.20.027915
noncoding29838C29838-C-3030B.1.20.000264
noncoding29838C29838TCT2323B.1.10.000417
noncoding29838C29838-C-2323B.1.1770.000303
noncoding29838C29838ACA2222AY.40.000034
noncoding29838C29838-C-2222B.10.000202
noncoding29838C29838-C-2121B.1.617.20.000079
noncoding29838C29838-C-2020B.1.10.000363
noncoding29838C29838TCT1919B.1.360.002772
noncoding29838C29838ACA1515AY.250.00009
noncoding29838C29838-C-1414AY.90.000946
noncoding29838C29838-C-1414P.10.000221
noncoding29838C29838HCH1313All0.000002
noncoding29838C29838ACA1313B.1.10.000236
noncoding29838C29838TCT1313B.1.36.290.006725
noncoding29838C29838TCT1313B.1.5260.000306
noncoding29838C29838ACA1313B.1.617.10.001677
noncoding29838C29838TCT1212AY.470.000373
noncoding29838C29838-C-1212B.1.2210.000852
noncoding29838C29838ACA1212B.1.360.001751
noncoding29838C29838TCT1111AY.1050.007074
noncoding29838C29838TCT1111AY.30.000109
noncoding29838C29838TCT1111AY.390.000272
noncoding29838C29838-C-1111AY.430.000049
noncoding29838C29838TCT1111AY.50.000227
noncoding29838C29838ACA1111B.1.617.20.000041
noncoding29838C29838-C-1010AY.40.000016
noncoding29838C29838GCG1010B.10.000092
noncoding29838C29838-C-1010B.1.1.5190.000397
noncoding29838C29838-C-99AD.20.001971
noncoding29838C29838TCT99AY.1020.000239
noncoding29838C29838TCT99AY.640.005357
noncoding29838C29838TCT99B.1.1.5190.000357
noncoding29838C29838TCT99B.1.1600.000281
noncoding29838C29838-C-99B.1.2580.000599
noncoding29838C29838TCT99B.1.3510.000268
noncoding29838C29838TCT99B.1.4290.000212
noncoding29838C29838TCT88AY.750.000448
noncoding29838C29838TCT88B.1.617.10.001032
noncoding29838C29838TCT88B.1.6370.000585
noncoding29838C29838TCT77AY.1000.000322
noncoding29838C29838ACA77AY.430.000031
noncoding29838C29838TCT77B.1.1.280.002179
noncoding29838C29838ACA77D.20.000525
noncoding29838C29838TCT66AY.1180.000376
noncoding29838C29838TCT66AY.200.000233
noncoding29838C29838-C-66AY.440.000037
noncoding29838C29838TCT66AY.90.000406
noncoding29838C29838TCT66B.1.1100.027149
noncoding29838C29838ACA66B.1.20.000053
noncoding29838C29838TCT66B.1.30.015707
noncoding29838C29838-C-66B.1.5770.004124
noncoding29838C29838-C-55AY.1020.000133
noncoding29838C29838-C-55AY.1030.000031
noncoding29838C29838TCT55AY.540.000477
noncoding29838C29838TCT55B.1.1.1210.012136
noncoding29838C29838-C-55B.1.1.2180.038462
noncoding29838C29838ACA55B.1.1.280.001556
noncoding29838C29838HCH55B.1.1.70.000004
noncoding29838C29838TCT55B.1.2430.000348
noncoding29838C29838TCT55B.1.2580.000333
noncoding29838C29838ACA55B.1.36.290.002587
noncoding29838C29838-C-55B.1.4290.000118
noncoding29838C29838TCT55B.1.4690.018051
noncoding29838C29838TCT55B.1.5510.006452
noncoding29838C29838TCT55B.1.5600.023148
noncoding29838C29838GCG55B.1.617.10.000645
noncoding29838C29838-C-55C.10.011962
noncoding29838C29838DCD44All0.000001
noncoding29838C29838ACA44AY.1020.000106
noncoding29838C29838TCT44AY.1200.000149
noncoding29838C29838-C-44AY.250.000024
noncoding29838C29838GCG44AY.430.000018
noncoding29838C29838-C-44AY.99.20.000369
noncoding29838C29838TCT44B.1.1.370.000771
noncoding29838C29838-C-44B.1.1600.000125
noncoding29838C29838TCT44B.1.177.530.009569
noncoding29838C29838-C-44B.1.2340.000528
noncoding29838C29838-C-44B.1.3510.000119
noncoding29838C29838GCG44B.1.360.000584
noncoding29838C29838ACA44B.1.36.170.001976
noncoding29838C29838TCT44B.1.4270.000202
noncoding29838C29838-C-44B.1.5740.008602
noncoding29838C29838TCT44C.350.003096
noncoding29838C29838TCT44P.1.170.000647
noncoding29838C29838-C-44Q.10.000505
noncoding29838C29838TCT33AY.1170.000254
noncoding29838C29838TCT33AY.1190.000106
noncoding29838C29838TCT33AY.230.000209
noncoding29838C29838TCT33AY.260.000085
noncoding29838C29838-C-33AY.30.00003
noncoding29838C29838TCT33AY.330.0002
noncoding29838C29838-C-33AY.360.000445
noncoding29838C29838-C-33AY.390.000074
noncoding29838C29838ACA33AY.440.000018
noncoding29838C29838-C-33AY.7.20.001678
noncoding29838C29838ACA33AY.710.001425
noncoding29838C29838TCT33AY.75.10.000541
noncoding29838C29838GCG33B.1.1.2160.002671
noncoding29838C29838TCT33B.1.1.2160.002671
noncoding29838C29838ACA33B.1.1.2160.002671
noncoding29838C29838ACA33B.1.1.3060.001315
noncoding29838C29838TCT33B.1.1.3060.001315
noncoding29838C29838TCT33B.1.1.3510.00838
noncoding29838C29838-C-33B.1.1.4480.006098
noncoding29838C29838ACA33B.1.2140.010989
noncoding29838C29838TCT33B.1.258.170.000312
noncoding29838C29838TCT33B.1.2930.0375
noncoding29838C29838ACA33B.1.3510.000089
noncoding29838C29838TCT33B.1.36.170.001482
noncoding29838C29838ACA33B.1.5600.013889
noncoding29838C29838-C-33B.1.5960.000261
noncoding29838C29838-C-33B.1.617.10.000387
noncoding29838C29838ACA33B.1.6190.002613
noncoding29838C29838-C-33B.6.60.002667
noncoding29838C29838TCT33D.20.000225
noncoding29838C29838ACA33P.20.00056
noncoding29838C29838ACA220.111111
noncoding29838C29838-C-22A0.000774
noncoding29838C29838TCT22A.10.000564
noncoding29838C29838ACA22AY.1030.000012
noncoding29838C29838TCT22AY.1080.002205
noncoding29838C29838ACA22AY.30.00002
noncoding29838C29838TCT22AY.3.10.000171
noncoding29838C29838ACA22AY.330.000134
noncoding29838C29838TCT22AY.420.00008
noncoding29838C29838ACA22AY.420.00008
noncoding29838C29838TCT22AY.450.000243
noncoding29838C29838-C-22AY.460.000208
noncoding29838C29838TCT22AY.590.001059
noncoding29838C29838TCT22AY.610.00021
noncoding29838C29838ACA22AY.690.000373
noncoding29838C29838TCT22AY.730.001331
noncoding29838C29838TCT22AY.810.003984
noncoding29838C29838TCT22AY.980.000158
noncoding29838C29838ACA22AY.98.10.000097
noncoding29838C29838ACA22B0.000256
noncoding29838C29838-C-22B0.000256
noncoding29838C29838HCH22B.10.000018
noncoding29838C29838TCT22B.1.1.10.000653
noncoding29838C29838-C-22B.1.1.1660.066667
noncoding29838C29838TCT22B.1.1.2140.000111
noncoding29838C29838-C-22B.1.1.2220.000408
noncoding29838C29838TCT22B.1.1.2220.000408
noncoding29838C29838TCT22B.1.1.2340.024096
noncoding29838C29838TCT22B.1.1.2410.004141
noncoding29838C29838TCT22B.1.1.250.001137
noncoding29838C29838TCT22B.1.1.2650.006309
noncoding29838C29838GCG22B.1.1.270.011299
noncoding29838C29838-C-22B.1.1.2770.001517
noncoding29838C29838-C-22B.1.1.3050.007722
noncoding29838C29838-C-22B.1.1.3060.000877
noncoding29838C29838-C-22B.1.1.3170.000823
noncoding29838C29838-C-22B.1.1.3180.000604
noncoding29838C29838ACA22B.1.1.3260.003521
noncoding29838C29838TCT22B.1.1.330.000842
noncoding29838C29838ACA22B.1.1.330.000842
noncoding29838C29838TCT22B.1.1.3540.008772
noncoding29838C29838TCT22B.1.1.390.001019
noncoding29838C29838TCT22B.1.1.4160.00181
noncoding29838C29838-C-22B.1.1.460.008734
noncoding29838C29838ACA22B.1.1.5190.000079
noncoding29838C29838DCD22B.1.1.70.000002
noncoding29838C29838-C-22B.1.177.510.009132
noncoding29838C29838TCT22B.1.177.750.002081
noncoding29838C29838ACA22B.1.177.830.002963
noncoding29838C29838-C-22B.1.177.860.000367
noncoding29838C29838TCT22B.1.2140.007326
noncoding29838C29838ACA22B.1.2340.000264
noncoding29838C29838ACA22B.1.2430.000139
noncoding29838C29838ACA22B.1.2580.000133
noncoding29838C29838WCW22B.1.2580.000133
noncoding29838C29838-C-22B.1.3110.000549
noncoding29838C29838WCW22B.1.3510.000059
noncoding29838C29838HCH22B.1.3510.000059
noncoding29838C29838-C-22B.1.360.000292
noncoding29838C29838ACA22B.1.36.220.002415
noncoding29838C29838TCT22B.1.36.220.002415
noncoding29838C29838TCT22B.1.4260.002018
noncoding29838C29838ACA22B.1.4270.000101
noncoding29838C29838TCT22B.1.4700.002809
noncoding29838C29838-C-22B.1.5260.000047
noncoding29838C29838TCT22B.1.5380.016129
noncoding29838C29838TCT22B.1.5750.000607
noncoding29838C29838TCT22B.1.5950.000522
noncoding29838C29838TCT22B.1.5960.000174
noncoding29838C29838TCT22B.1.6090.000959
noncoding29838C29838-C-22B.1.6210.000177
noncoding29838C29838ACA22B.1.6210.000177
noncoding29838C29838ACA22B.400.000729
noncoding29838C29838TCT22B.6.60.001778
noncoding29838C29838-C-22C.350.001548
noncoding29838C29838-C-22C.360.001821
noncoding29838C29838TCT22P.1.140.000096
noncoding29838C29838-C-22P.1.150.000465
noncoding29838C29838TCT22P.20.000373
noncoding29838C29838-C-22P.20.000373
noncoding29838C29838TCT22Q.30.00029
noncoding29838C29838-C-11A.10.000282
noncoding29838C29838ACA11A.10.000282
noncoding29838C29838TCT11A.23.10.000704
noncoding29838C29838TCT11A.290.005319
noncoding29838C29838TCT11AD.20.000219
noncoding29838C29838VCV11All0
noncoding29838C29838KCK11All0
noncoding29838C29838BCB11All0
noncoding29838C29838RCR11All0
noncoding29838C29838VCV11AY.1000.000046
noncoding29838C29838-C-11AY.1000.000046
noncoding29838C29838TCT11AY.1010.00049
noncoding29838C29838GCG11AY.1020.000027
noncoding29838C29838GCG11AY.1030.000006
noncoding29838C29838TCT11AY.1060.000335
noncoding29838C29838GCG11AY.1060.000335
noncoding29838C29838ACA11AY.1060.000335
noncoding29838C29838GCG11AY.1110.000183
noncoding29838C29838TCT11AY.1130.000142
noncoding29838C29838TCT11AY.116.10.000311
noncoding29838C29838ACA11AY.120.10.000321
noncoding29838C29838-C-11AY.1210.000135
noncoding29838C29838-C-11AY.160.00038
noncoding29838C29838GCG11AY.230.00007
noncoding29838C29838GCG11AY.250.000006
noncoding29838C29838HCH11AY.260.000028
noncoding29838C29838GCG11AY.290.000016
noncoding29838C29838-C-11AY.3.10.000085
noncoding29838C29838GCG11AY.330.000067
noncoding29838C29838TCT11AY.350.000233
noncoding29838C29838GCG11AY.370.000316
noncoding29838C29838TCT11AY.39.10.00004
noncoding29838C29838GCG11AY.40.000002
noncoding29838C29838TCT11AY.4.20.000022
noncoding29838C29838TCT11AY.4.2.10.000149
noncoding29838C29838ACA11AY.410.000294
noncoding29838C29838GCG11AY.420.00004
noncoding29838C29838-C-11AY.420.00004
noncoding29838C29838-C-11AY.450.000122
noncoding29838C29838-C-11AY.46.60.000072
noncoding29838C29838TCT11AY.46.60.000072
noncoding29838C29838-C-11AY.5.30.000337
noncoding29838C29838-C-11AY.5.40.000277
noncoding29838C29838ACA11AY.540.000095
noncoding29838C29838TCT11AY.60.000041
noncoding29838C29838-C-11AY.620.000436
noncoding29838C29838-C-11AY.640.000595
noncoding29838C29838TCT11AY.670.000464
noncoding29838C29838-C-11AY.700.000209
noncoding29838C29838ACA11AY.700.000209
noncoding29838C29838TCT11AY.740.000116
noncoding29838C29838-C-11AY.750.000056
noncoding29838C29838ACA11AY.75.10.00018
noncoding29838C29838ACA11AY.760.004831
noncoding29838C29838TCT11AY.840.000437
noncoding29838C29838ACA11AY.850.000427
noncoding29838C29838TCT11AY.860.00083
noncoding29838C29838ACA11AY.9.10.000084
noncoding29838C29838TCT11AY.9.10.000084
noncoding29838C29838TCT11AY.9.20.000037
noncoding29838C29838ACA11AY.9.20.000037
noncoding29838C29838-C-11AY.950.000761
noncoding29838C29838-C-11AY.970.001701
noncoding29838C29838-C-11AY.980.000079
noncoding29838C29838GCG11AY.98.10.000048
noncoding29838C29838-C-11AY.98.10.000048
noncoding29838C29838TCT11B0.000128
noncoding29838C29838DCD11B.10.000009
noncoding29838C29838GCG11B.1.10.000018
noncoding29838C29838HCH11B.1.10.000018
noncoding29838C29838ACA11B.1.1.1130.006993
noncoding29838C29838-C-11B.1.1.1370.0125
noncoding29838C29838-C-11B.1.1.1390.022727
noncoding29838C29838-C-11B.1.1.1740.003378
noncoding29838C29838TCT11B.1.1.1860.003436
noncoding29838C29838-C-11B.1.1.1920.002309
noncoding29838C29838-C-11B.1.1.1970.037037
noncoding29838C29838-C-11B.1.1.1980.001468
noncoding29838C29838TCT11B.1.1.2200.001859
noncoding29838C29838HCH11B.1.1.2200.001859
noncoding29838C29838ACA11B.1.1.2220.000204
noncoding29838C29838-C-11B.1.1.2310.003096
noncoding29838C29838-C-11B.1.1.2360.006897
noncoding29838C29838ACA11B.1.1.250.000569
noncoding29838C29838ACA11B.1.1.2540.011236
noncoding29838C29838ACA11B.1.1.270.00565
noncoding29838C29838ACA11B.1.1.2770.000759
noncoding29838C29838ACA11B.1.1.2820.011628
noncoding29838C29838TCT11B.1.1.2840.000107
noncoding29838C29838TCT11B.1.1.2970.002237
noncoding29838C29838BCB11B.1.1.3170.000412
noncoding29838C29838ACA11B.1.1.3180.000302
noncoding29838C29838ACA11B.1.1.3290.003846
noncoding29838C29838-C-11B.1.1.330.000421
noncoding29838C29838-C-11B.1.1.3480.000796
noncoding29838C29838-C-11B.1.1.3720.000689
noncoding29838C29838GCG11B.1.1.3740.002375
noncoding29838C29838-C-11B.1.1.4130.006897
noncoding29838C29838-C-11B.1.1.5150.02
noncoding29838C29838GCG11B.1.1.5190.00004
noncoding29838C29838KCK11B.1.1.5190.00004
noncoding29838C29838-C-11B.1.1.5230.001563
noncoding29838C29838-C-11B.1.1.540.003021
noncoding29838C29838TCT11B.1.1.630.000386
noncoding29838C29838TCT11B.1.1.700.000341
noncoding29838C29838-C-11B.1.1.700.000341
noncoding29838C29838-C-11B.1.1.990.02381
noncoding29838C29838GCG11B.1.1600.000031
noncoding29838C29838TCT11B.1.160.160.000929
noncoding29838C29838ACA11B.1.1770.000013
noncoding29838C29838-C-11B.1.177.210.000076
noncoding29838C29838TCT11B.1.177.210.000076
noncoding29838C29838ACA11B.1.177.230.003236
noncoding29838C29838-C-11B.1.177.330.001645
noncoding29838C29838TCT11B.1.177.330.001645
noncoding29838C29838-C-11B.1.177.350.000691
noncoding29838C29838TCT11B.1.177.40.000211
noncoding29838C29838TCT11B.1.177.410.0025
noncoding29838C29838TCT11B.1.177.430.001477
noncoding29838C29838TCT11B.1.177.570.000281
noncoding29838C29838TCT11B.1.177.600.000218
noncoding29838C29838TCT11B.1.177.630.002703
noncoding29838C29838ACA11B.1.177.750.001041
noncoding29838C29838ACA11B.1.177.860.000183
noncoding29838C29838-C-11B.1.1800.05
noncoding29838C29838TCT11B.1.2060.000816
noncoding29838C29838-C-11B.1.2100.002132
noncoding29838C29838TCT11B.1.2100.002132
noncoding29838C29838HCH11B.1.2210.000071
noncoding29838C29838ACA11B.1.2210.000071
noncoding29838C29838TCT11B.1.2210.000071
noncoding29838C29838TCT11B.1.221.20.004016
noncoding29838C29838TCT11B.1.2220.001692
noncoding29838C29838TCT11B.1.2410.000812
noncoding29838C29838-C-11B.1.2430.00007
noncoding29838C29838-C-11B.1.258.170.000104
noncoding29838C29838ACA11B.1.2600.003344
noncoding29838C29838-C-11B.1.2650.001271
noncoding29838C29838TCT11B.1.3200.001245
noncoding29838C29838TCT11B.1.3400.004292
noncoding29838C29838-C-11B.1.3490.000715
noncoding29838C29838RCR11B.1.3510.00003
noncoding29838C29838DCD11B.1.3510.00003
noncoding29838C29838ACA11B.1.351.20.000303
noncoding29838C29838ACA11B.1.351.50.0006
noncoding29838C29838-C-11B.1.36.10.00114
noncoding29838C29838TCT11B.1.36.100.004785
noncoding29838C29838GCG11B.1.36.170.000494
noncoding29838C29838GCG11B.1.36.290.000517
noncoding29838C29838TCT11B.1.3610.001289
noncoding29838C29838TCT11B.1.3960.000706
noncoding29838C29838TCT11B.1.4000.000429
noncoding29838C29838TCT11B.1.4040.001302
noncoding29838C29838-C-11B.1.4270.00005
noncoding29838C29838ACA11B.1.466.20.000391
noncoding29838C29838TCT11B.1.466.20.000391
noncoding29838C29838ACA11B.1.4680.005714
noncoding29838C29838TCT11B.1.4710.002732
noncoding29838C29838-C-11B.1.4970.000315
noncoding29838C29838TCT11B.1.5050.004386
noncoding29838C29838TCT11B.1.5090.000866
noncoding29838C29838-C-11B.1.5170.000427
noncoding29838C29838GCG11B.1.5240.001406
noncoding29838C29838TCT11B.1.5250.000113
noncoding29838C29838ACA11B.1.5440.006024
noncoding29838C29838GCG11B.1.5440.006024
noncoding29838C29838TCT11B.1.5460.003704
noncoding29838C29838GCG11B.1.5600.00463
noncoding29838C29838TCT11B.1.564.10.001577
noncoding29838C29838-C-11B.1.5760.000907
noncoding29838C29838ACA11B.1.5770.000687
noncoding29838C29838-C-11B.1.5820.000491
noncoding29838C29838ACA11B.1.5890.007576
noncoding29838C29838ACA11B.1.5950.000261
noncoding29838C29838ACA11B.1.5960.000087
noncoding29838C29838GCG11B.1.617.20.000004
noncoding29838C29838WCW11B.1.617.20.000004
noncoding29838C29838-C-11B.1.617.30.002985
noncoding29838C29838TCT11B.1.617.30.002985
noncoding29838C29838ACA11B.1.617.30.002985
noncoding29838C29838TCT11B.1.6180.004032
noncoding29838C29838ACA11B.1.6180.004032
noncoding29838C29838WCW11B.1.6200.000946
noncoding29838C29838TCT11B.1.6210.000089
noncoding29838C29838-C-11B.1.6270.00202
noncoding29838C29838-C-11B.1.6300.005236
noncoding29838C29838ACA11B.1.6370.000073
noncoding29838C29838-C-11B.1.6370.000073
noncoding29838C29838ACA11C.360.000911
noncoding29838C29838TCT11C.36.30.000567
noncoding29838C29838ACA11C.36.30.000567
noncoding29838C29838-C-11C.370.000116
noncoding29838C29838TCT11C.370.000116
noncoding29838C29838TCT11C.380.008065
noncoding29838C29838TCT11N.50.001767
noncoding29838C29838-C-11N.60.007092
noncoding29838C29838WCW11P.10.000016
noncoding29838C29838ACA11P.10.000016
noncoding29838C29838-C-11P.1.10.000318
noncoding29838C29838TCT11P.1.130.000898
noncoding29838C29838-C-11P.1.140.000048
noncoding29838C29838TCT11P.1.20.001156
noncoding29838C29838-C-11P.1.70.000319
noncoding29838C29838TCT11P.1.70.000319
noncoding29838C29838ACA11Q.10.000126
noncoding29838C29838GCG11Q.10.000126
noncoding29838C29838-C-11Q.30.000145
noncoding29838C29838TCT11R.10.00009