CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29834

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29834T29834AnoncodingTA6744667446129834-29834
noncoding29834T29834CnoncodingTC12011201129834-29834
noncoding29834T29834-noncodingT-530530129834-29834
noncoding29834T29834GnoncodingTG7777129834-29834
noncoding29834T29834RnoncodingTR11129834-29834
noncoding29834T29834HnoncodingTH11129834-29834

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29834T29834ATA6744667446All0.0129
noncoding29834T29834ATA4135541355P.10.651506
noncoding29834T29834ATA80398039P.1.140.384273
noncoding29834T29834ATA39863986P.1.170.644775
noncoding29834T29834ATA24232423P.1.100.652924
noncoding29834T29834ATA22292229P.1.70.711686
noncoding29834T29834ATA17901790P.1.10.568615
noncoding29834T29834ATA15141514P.1.150.351766
noncoding29834T29834CTC12011201All0.00023
noncoding29834T29834ATA11771177P.1.120.5697
noncoding29834T29834ATA970970P.1.40.947266
noncoding29834T29834ATA936936P.1.160.350168
noncoding29834T29834ATA680680P.1.130.610961
noncoding29834T29834ATA638638P.1.20.737572
noncoding29834T29834-T-530530All0.000101
noncoding29834T29834CTC496496B.1.1.70.000444
noncoding29834T29834ATA485485P.1.60.94358
noncoding29834T29834-T-310310B.1.1.70.000278
noncoding29834T29834ATA177177P.1.80.84689
noncoding29834T29834ATA174174P.1.90.836538
noncoding29834T29834ATA169169P.1.17.10.147857
noncoding29834T29834ATA149149B.1.1.70.000133
noncoding29834T29834ATA8989P.1.10.10.723577
noncoding29834T29834ATA8585P.1.110.867347
noncoding29834T29834GTG7777All0.000015
noncoding29834T29834CTC6262B.1.617.20.000233
noncoding29834T29834ATA5555B.10.000504
noncoding29834T29834ATA5454B.1.1.390.027523
noncoding29834T29834CTC4747AY.440.000286
noncoding29834T29834CTC4444AY.40.000068
noncoding29834T29834GTG4444B.1.1.70.000039
noncoding29834T29834ATA3939B.1.10.000707
noncoding29834T29834CTC3636AY.250.000217
noncoding29834T29834CTC3232AY.430.000142
noncoding29834T29834CTC3131AY.1180.001942
noncoding29834T29834CTC2727B.10.000247
noncoding29834T29834CTC2626AY.110.034806
noncoding29834T29834ATA2626P.1.30.896552
noncoding29834T29834CTC2323B.1.20.000203
noncoding29834T29834ATA2323P.20.004293
noncoding29834T29834CTC2222B.1.2400.004742
noncoding29834T29834ATA2222P.1.10.20.916667
noncoding29834T29834CTC2121B.1.1770.000277
noncoding29834T29834CTC2020P.10.000315
noncoding29834T29834CTC1818AY.330.001202
noncoding29834T29834-T-1717B.1.617.20.000064
noncoding29834T29834CTC1313AY.1020.000345
noncoding29834T29834CTC1313AY.9.20.000477
noncoding29834T29834CTC1313B.1.10.000236
noncoding29834T29834-T-1313B.1.10.000236
noncoding29834T29834-T-1313P.10.000205
noncoding29834T29834CTC1212AY.1030.000075
noncoding29834T29834CTC1212AY.260.00034
noncoding29834T29834ATA1212B.1.617.20.000045
noncoding29834T29834CTC1111AY.230.000767
noncoding29834T29834CTC1111AY.980.000869
noncoding29834T29834ATA1111B.1.1.280.003424
noncoding29834T29834ATA1111P.1.50.846154
noncoding29834T29834-T-99B.1.1.5190.000357
noncoding29834T29834ATA88AY.1190.000282
noncoding29834T29834-T-88AY.40.000012
noncoding29834T29834-T-88B.10.000073
noncoding29834T29834CTC88B.1.1.5190.000318
noncoding29834T29834ATA88B.1.1.5280.038462
noncoding29834T29834CTC77AY.1200.00026
noncoding29834T29834CTC77AY.390.000173
noncoding29834T29834ATA77AY.40.000011
noncoding29834T29834ATA77AY.430.000031
noncoding29834T29834CTC77B.1.3510.000208
noncoding29834T29834CTC66AY.1190.000212
noncoding29834T29834CTC66AY.30.00006
noncoding29834T29834CTC66AY.470.000187
noncoding29834T29834CTC66AY.60.000247
noncoding29834T29834CTC66AY.610.000629
noncoding29834T29834CTC66B.1.5960.000523
noncoding29834T29834GTG66B.1.617.20.000023
noncoding29834T29834-T-55AY.430.000022
noncoding29834T29834-T-55AY.99.20.000461
noncoding29834T29834ATA55B.1.1600.000156
noncoding29834T29834-T-55B.1.20.000044
noncoding29834T29834CTC55B.1.2580.000333
noncoding29834T29834-T-55C.10.011962
noncoding29834T29834CTC55C.370.00058
noncoding29834T29834GTG55P.10.000079
noncoding29834T29834-T-44AY.1020.000106
noncoding29834T29834-T-44AY.250.000024
noncoding29834T29834CTC44AY.4.20.000087
noncoding29834T29834ATA44AY.9.20.000147
noncoding29834T29834ATA44AY.99.20.000369
noncoding29834T29834CTC44B.1.1.1590.018692
noncoding29834T29834CTC44B.1.1.4280.037736
noncoding29834T29834-T-44B.1.1770.000053
noncoding29834T29834-T-44B.1.2210.000284
noncoding29834T29834ATA44C.370.000464
noncoding29834T29834CTC44C.37.10.010471
noncoding29834T29834CTC44P.1.160.001496
noncoding29834T29834CTC44P.1.170.000647
noncoding29834T29834ATA33AY.1030.000019
noncoding29834T29834CTC33AY.1060.001005
noncoding29834T29834ATA33AY.230.000209
noncoding29834T29834-T-33AY.30.00003
noncoding29834T29834-T-33AY.360.000445
noncoding29834T29834CTC33AY.420.000121
noncoding29834T29834-T-33AY.440.000018
noncoding29834T29834ATA33AY.440.000018
noncoding29834T29834CTC33AY.460.000312
noncoding29834T29834CTC33AY.850.001282
noncoding29834T29834-T-33B.1.1.2180.023077
noncoding29834T29834CTC33B.1.1.3170.001235
noncoding29834T29834-T-33B.1.1.4480.006098
noncoding29834T29834GTG33B.1.1.5190.000119
noncoding29834T29834CTC33B.1.1600.000094
noncoding29834T29834ATA33B.1.1770.00004
noncoding29834T29834ATA33B.1.2210.000213
noncoding29834T29834ATA33B.1.2580.0002
noncoding29834T29834-T-33B.1.2580.0002
noncoding29834T29834-T-33B.1.4290.000071
noncoding29834T29834-T-33B.6.60.002667
noncoding29834T29834CTC33P.1.140.000143
noncoding29834T29834-T-33P.1.170.000485
noncoding29834T29834-T-22A0.000774
noncoding29834T29834ATA22A.10.000564
noncoding29834T29834ATA22A.2.50.000998
noncoding29834T29834CTC22AY.1000.000092
noncoding29834T29834-T-22AY.1030.000012
noncoding29834T29834CTC22AY.1130.000285
noncoding29834T29834CTC22AY.200.000078
noncoding29834T29834CTC22AY.370.000632
noncoding29834T29834-T-22AY.390.000049
noncoding29834T29834GTG22AY.40.000003
noncoding29834T29834-T-22AY.4.20.000043
noncoding29834T29834ATA22AY.420.00008
noncoding29834T29834GTG22AY.430.000009
noncoding29834T29834CTC22AY.98.10.000097
noncoding29834T29834-T-22AZ.20.001642
noncoding29834T29834-T-22B0.000256
noncoding29834T29834CTC22B.1.1.100.00223
noncoding29834T29834-T-22B.1.1.1660.066667
noncoding29834T29834CTC22B.1.1.2630.003115
noncoding29834T29834-T-22B.1.1.3060.000877
noncoding29834T29834-T-22B.1.1.3170.000823
noncoding29834T29834-T-22B.1.1.3480.001592
noncoding29834T29834-T-22B.1.1.4130.013793
noncoding29834T29834-T-22B.1.1.460.008734
noncoding29834T29834ATA22B.1.1.5190.000079
noncoding29834T29834CTC22B.1.1110.00235
noncoding29834T29834-T-22B.1.1600.000062
noncoding29834T29834-T-22B.1.177.860.000367
noncoding29834T29834ATA22B.1.20.000018
noncoding29834T29834-T-22B.1.2100.004264
noncoding29834T29834CTC22B.1.2210.000142
noncoding29834T29834GTG22B.1.2430.000139
noncoding29834T29834CTC22B.1.2430.000139
noncoding29834T29834ATA22B.1.3490.00143
noncoding29834T29834-T-22B.1.3510.000059
noncoding29834T29834ATA22B.1.4270.000101
noncoding29834T29834CTC22B.1.4290.000047
noncoding29834T29834-T-22B.1.5260.000047
noncoding29834T29834CTC22B.1.5260.000047
noncoding29834T29834CTC22B.1.5610.000794
noncoding29834T29834CTC22B.1.5680.002222
noncoding29834T29834CTC22B.1.5760.001813
noncoding29834T29834-T-22B.1.5960.000174
noncoding29834T29834CTC22B.1.6190.001742
noncoding29834T29834-T-22B.1.6210.000177
noncoding29834T29834-T-22C.360.001821
noncoding29834T29834-T-22P.1.10.000635
noncoding29834T29834-T-22P.1.140.000096
noncoding29834T29834-T-22P.1.150.000465
noncoding29834T29834-T-22P.1.70.000639
noncoding29834T29834-T-22P.20.000373
noncoding29834T29834ATA22Q.10.000253
noncoding29834T29834CTC22Q.10.000253
noncoding29834T29834ATA110.055556
noncoding29834T29834CTC11A.20.000662
noncoding29834T29834-T-11AD.20.000219
noncoding29834T29834CTC11AD.20.000219
noncoding29834T29834RTR11All0
noncoding29834T29834HTH11All0
noncoding29834T29834-T-11AY.1000.000046
noncoding29834T29834ATA11AY.1000.000046
noncoding29834T29834ATA11AY.1010.00049
noncoding29834T29834ATA11AY.1020.000027
noncoding29834T29834GTG11AY.1030.000006
noncoding29834T29834ATA11AY.1160.000287
noncoding29834T29834ATA11AY.1170.000085
noncoding29834T29834CTC11AY.160.00038
noncoding29834T29834-T-11AY.160.00038
noncoding29834T29834ATA11AY.200.000039
noncoding29834T29834-T-11AY.230.00007
noncoding29834T29834CTC11AY.23.10.000417
noncoding29834T29834GTG11AY.30.00001
noncoding29834T29834-T-11AY.3.10.000085
noncoding29834T29834GTG11AY.370.000316
noncoding29834T29834ATA11AY.390.000025
noncoding29834T29834ATA11AY.39.10.00004
noncoding29834T29834CTC11AY.4.2.10.000149
noncoding29834T29834CTC11AY.4.40.000409
noncoding29834T29834CTC11AY.4.50.000107
noncoding29834T29834-T-11AY.420.00004
noncoding29834T29834GTG11AY.440.000006
noncoding29834T29834CTC11AY.450.000122
noncoding29834T29834CTC11AY.46.30.000934
noncoding29834T29834CTC11AY.46.40.000165
noncoding29834T29834CTC11AY.46.60.000072
noncoding29834T29834GTG11AY.50.000021
noncoding29834T29834ATA11AY.50.000021
noncoding29834T29834GTG11AY.5.30.000337
noncoding29834T29834-T-11AY.5.40.000277
noncoding29834T29834CTC11AY.590.00053
noncoding29834T29834CTC11AY.600.000938
noncoding29834T29834-T-11AY.620.000436
noncoding29834T29834CTC11AY.680.000274
noncoding29834T29834-T-11AY.680.000274
noncoding29834T29834ATA11AY.730.000665
noncoding29834T29834CTC11AY.740.000116
noncoding29834T29834-T-11AY.750.000056
noncoding29834T29834CTC11AY.750.000056
noncoding29834T29834CTC11AY.75.10.00018
noncoding29834T29834ATA11AY.75.10.00018
noncoding29834T29834-T-11AY.75.10.00018
noncoding29834T29834RTR11AY.850.000427
noncoding29834T29834ATA11AY.90.000068
noncoding29834T29834CTC11AY.9.10.000084
noncoding29834T29834ATA11AY.9.10.000084
noncoding29834T29834GTG11AY.900.000684
noncoding29834T29834ATA11AY.950.000761
noncoding29834T29834-T-11AY.950.000761
noncoding29834T29834ATA11AY.980.000079
noncoding29834T29834-T-11AY.98.10.000048
noncoding29834T29834GTG11B0.000128
noncoding29834T29834GTG11B.1.10.000018
noncoding29834T29834HTH11B.1.10.000018
noncoding29834T29834CTC11B.1.1.10.000327
noncoding29834T29834-T-11B.1.1.1390.022727
noncoding29834T29834ATA11B.1.1.1420.017544
noncoding29834T29834CTC11B.1.1.1580.012195
noncoding29834T29834ATA11B.1.1.1740.003378
noncoding29834T29834-T-11B.1.1.1970.037037
noncoding29834T29834-T-11B.1.1.1980.001468
noncoding29834T29834ATA11B.1.1.1980.001468
noncoding29834T29834-T-11B.1.1.2220.000204
noncoding29834T29834-T-11B.1.1.2360.006897
noncoding29834T29834ATA11B.1.1.2650.003155
noncoding29834T29834GTG11B.1.1.270.00565
noncoding29834T29834-T-11B.1.1.2770.000759
noncoding29834T29834ATA11B.1.1.3060.000438
noncoding29834T29834CTC11B.1.1.3060.000438
noncoding29834T29834-T-11B.1.1.3180.000302
noncoding29834T29834CTC11B.1.1.3180.000302
noncoding29834T29834-T-11B.1.1.330.000421
noncoding29834T29834CTC11B.1.1.3480.000796
noncoding29834T29834CTC11B.1.1.3630.005988
noncoding29834T29834CTC11B.1.1.3690.000446
noncoding29834T29834-T-11B.1.1.3720.000689
noncoding29834T29834CTC11B.1.1.3760.005952
noncoding29834T29834ATA11B.1.1.4090.002833
noncoding29834T29834CTC11B.1.1.440.00241
noncoding29834T29834CTC11B.1.1.4420.018519
noncoding29834T29834CTC11B.1.1.4640.001473
noncoding29834T29834-T-11B.1.1.5150.02
noncoding29834T29834-T-11B.1.1.540.003021
noncoding29834T29834CTC11B.1.1.610.008772
noncoding29834T29834CTC11B.1.1.830.00271
noncoding29834T29834-T-11B.1.1.990.02381
noncoding29834T29834CTC11B.1.110.30.000718
noncoding29834T29834ATA11B.1.1570.002985
noncoding29834T29834ATA11B.1.1700.00431
noncoding29834T29834-T-11B.1.177.330.001645
noncoding29834T29834CTC11B.1.177.520.001757
noncoding29834T29834CTC11B.1.177.730.000566
noncoding29834T29834-T-11B.1.177.750.001041
noncoding29834T29834CTC11B.1.177.750.001041
noncoding29834T29834ATA11B.1.177.750.001041
noncoding29834T29834CTC11B.1.177.860.000183
noncoding29834T29834ATA11B.1.177.860.000183
noncoding29834T29834CTC11B.1.1800.05
noncoding29834T29834-T-11B.1.1800.05
noncoding29834T29834CTC11B.1.2100.002132
noncoding29834T29834ATA11B.1.214.20.0006
noncoding29834T29834CTC11B.1.2340.000132
noncoding29834T29834ATA11B.1.2350.002519
noncoding29834T29834CTC11B.1.2360.002053
noncoding29834T29834GTG11B.1.2420.018868
noncoding29834T29834-T-11B.1.2430.00007
noncoding29834T29834CTC11B.1.258.110.000396
noncoding29834T29834ATA11B.1.258.170.000104
noncoding29834T29834CTC11B.1.3200.001245
noncoding29834T29834CTC11B.1.3210.034483
noncoding29834T29834ATA11B.1.3260.007576
noncoding29834T29834CTC11B.1.3380.008621
noncoding29834T29834-T-11B.1.3490.000715
noncoding29834T29834CTC11B.1.3490.000715
noncoding29834T29834ATA11B.1.3510.00003
noncoding29834T29834CTC11B.1.351.10.038462
noncoding29834T29834CTC11B.1.360.000146
noncoding29834T29834ATA11B.1.36.100.004785
noncoding29834T29834GTG11B.1.36.180.00042
noncoding29834T29834ATA11B.1.3750.00082
noncoding29834T29834ATA11B.1.4000.000429
noncoding29834T29834ATA11B.1.4160.001269
noncoding29834T29834-T-11B.1.4270.00005
noncoding29834T29834CTC11B.1.4270.00005
noncoding29834T29834CTC11B.1.466.10.007194
noncoding29834T29834-T-11B.1.4970.000315
noncoding29834T29834CTC11B.1.5750.000303
noncoding29834T29834ATA11B.1.5760.000907
noncoding29834T29834CTC11B.1.5890.007576
noncoding29834T29834ATA11B.1.5960.000087
noncoding29834T29834GTG11B.1.617.10.000129
noncoding29834T29834CTC11B.1.617.10.000129
noncoding29834T29834-T-11B.1.617.10.000129
noncoding29834T29834CTC11B.1.617.30.002985
noncoding29834T29834-T-11B.1.617.30.002985
noncoding29834T29834ATA11B.1.619.10.000641
noncoding29834T29834-T-11B.1.6270.00202
noncoding29834T29834-T-11B.1.6300.005236
noncoding29834T29834ATA11B.1.6300.005236
noncoding29834T29834ATA11B.1.6370.000073
noncoding29834T29834-T-11B.1.6370.000073
noncoding29834T29834ATA11B.1.90.006173
noncoding29834T29834ATA11B.1.910.002075
noncoding29834T29834ATA11C.37.10.002618
noncoding29834T29834CTC11D.20.000075
noncoding29834T29834CTC11K.10.02381
noncoding29834T29834ATA11N.40.004255
noncoding29834T29834CTC11P.1.100.000269
noncoding29834T29834CTC11P.1.20.001156
noncoding29834T29834-T-11P.1.40.000977
noncoding29834T29834ATA11P.40.003802
noncoding29834T29834ATA11Q.20.000613
noncoding29834T29834-T-11Q.30.000145
noncoding29834T29834ATA11Q.30.000145