CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29791

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29791T29791-noncodingT-16811681129791-29791
noncoding29791T29791CnoncodingTC15951595129791-29791
noncoding29791T29791AnoncodingTA232232129791-29791
noncoding29791T29791GnoncodingTG2727129791-29791
noncoding29791T29791DnoncodingTD11129791-29791
noncoding29791T29791MnoncodingTM11129791-29791
noncoding29791T29791BnoncodingTB11129791-29791

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29791T29791-T-16811681All0.000322
noncoding29791T29791CTC15951595All0.000305
noncoding29791T29791-T-12741274B.1.1.70.001141
noncoding29791T29791CTC375375B.1.177.150.236593
noncoding29791T29791CTC246246AY.430.00109
noncoding29791T29791ATA232232All0.000044
noncoding29791T29791CTC173173B.1.617.20.000651
noncoding29791T29791CTC130130AA.21
noncoding29791T29791ATA115115AY.430.00051
noncoding29791T29791CTC110110AA.41
noncoding29791T29791CTC9191B.1.1.70.000081
noncoding29791T29791CTC6262AA.51
noncoding29791T29791CTC6262AA.61
noncoding29791T29791-T-4545B.1.617.20.000169
noncoding29791T29791CTC3737AA.31
noncoding29791T29791CTC3333AY.40.000051
noncoding29791T29791GTG2727All0.000005
noncoding29791T29791ATA2727AY.1100.003043
noncoding29791T29791ATA2323AY.9.20.000845
noncoding29791T29791CTC2121AY.440.000128
noncoding29791T29791-T-1919AY.920.005458
noncoding29791T29791ATA1919B.1.617.20.000072
noncoding29791T29791-T-1717AY.30.000169
noncoding29791T29791CTC1717AY.390.00042
noncoding29791T29791CTC1313AY.1190.000459
noncoding29791T29791-T-1313B.1.10.000236
noncoding29791T29791CTC1313B.1.1770.000171
noncoding29791T29791CTC1212AY.1110.002198
noncoding29791T29791CTC1212AY.340.001164
noncoding29791T29791ATA1212B.1.1.70.000011
noncoding29791T29791-T-1212B.1.3510.000357
noncoding29791T29791-T-1111B.1.20.000097
noncoding29791T29791-T-1111B.1.2580.000732
noncoding29791T29791CTC1111B.1.3510.000327
noncoding29791T29791-T-1010AY.250.00006
noncoding29791T29791CTC1010B.1.20.000088
noncoding29791T29791-T-1010P.10.000158
noncoding29791T29791CTC99AY.260.000255
noncoding29791T29791-T-99B.10.000082
noncoding29791T29791-T-88AY.40.000012
noncoding29791T29791-T-88AY.980.000632
noncoding29791T29791-T-88B.1.1.5190.000318
noncoding29791T29791GTG88B.1.1.70.000007
noncoding29791T29791-T-88B.1.177.860.001468
noncoding29791T29791CTC88P.10.000126
noncoding29791T29791-T-88P.1.160.002993
noncoding29791T29791CTC77AY.1030.000043
noncoding29791T29791CTC77AY.250.000042
noncoding29791T29791-T-77AY.290.00011
noncoding29791T29791-T-77AY.430.000031
noncoding29791T29791CTC77B.10.000064
noncoding29791T29791ATA77B.1.5260.000165
noncoding29791T29791CTC66AA.10.043478
noncoding29791T29791-T-66AY.440.000037
noncoding29791T29791CTC66AY.9.20.00022
noncoding29791T29791-T-66B.1.1.3170.00247
noncoding29791T29791CTC66B.1.1.5190.000238
noncoding29791T29791-T-66B.1.1600.000187
noncoding29791T29791-T-66B.1.2210.000426
noncoding29791T29791-T-66C.37.10.015707
noncoding29791T29791GTG66P.10.000095
noncoding29791T29791-T-66P.1.170.000971
noncoding29791T29791-T-55AY.1030.000031
noncoding29791T29791-T-55AY.1190.000177
noncoding29791T29791-T-55AY.390.000124
noncoding29791T29791CTC55AY.980.000395
noncoding29791T29791-T-55AY.99.20.000461
noncoding29791T29791ATA55B.10.000046
noncoding29791T29791CTC55B.1.1.1130.034965
noncoding29791T29791GTG55B.1.20.000044
noncoding29791T29791-T-55B.1.2430.000348
noncoding29791T29791-T-55B.1.5250.000566
noncoding29791T29791-T-55B.1.6190.004355
noncoding29791T29791-T-55C.10.011962
noncoding29791T29791-T-55Q.10.000632
noncoding29791T29791CTC44AY.460.000416
noncoding29791T29791CTC44AY.5.40.001107
noncoding29791T29791CTC44B.1.10.000073
noncoding29791T29791CTC44B.1.1600.000125
noncoding29791T29791-T-44B.1.4290.000094
noncoding29791T29791CTC33AY.1020.00008
noncoding29791T29791-T-33AY.1090.002219
noncoding29791T29791CTC33AY.1130.000427
noncoding29791T29791-T-33AY.230.000209
noncoding29791T29791CTC33AY.290.000047
noncoding29791T29791ATA33AY.740.000347
noncoding29791T29791-T-33B.1.1.460.0131
noncoding29791T29791-T-33B.1.1770.00004
noncoding29791T29791ATA33B.1.4270.000151
noncoding29791T29791CTC33B.1.4270.000151
noncoding29791T29791CTC33B.1.4290.000071
noncoding29791T29791CTC33C.370.000348
noncoding29791T29791-T-33P.20.00056
noncoding29791T29791-T-22A0.000774
noncoding29791T29791CTC22A.2.50.000998
noncoding29791T29791-T-22AY.1000.000092
noncoding29791T29791CTC22AY.1060.00067
noncoding29791T29791-T-22AY.1170.000169
noncoding29791T29791-T-22AY.140.000176
noncoding29791T29791CTC22AY.200.000078
noncoding29791T29791-T-22AY.260.000057
noncoding29791T29791CTC22AY.300.000791
noncoding29791T29791CTC22AY.380.000999
noncoding29791T29791ATA22AY.440.000012
noncoding29791T29791-T-22AY.46.20.001271
noncoding29791T29791-T-22AY.470.000062
noncoding29791T29791-T-22AY.50.000041
noncoding29791T29791-T-22AY.5.30.000675
noncoding29791T29791CTC22AY.530.000575
noncoding29791T29791-T-22AY.540.000191
noncoding29791T29791-T-22AY.610.00021
noncoding29791T29791CTC22AY.680.000547
noncoding29791T29791CTC22AY.750.000112
noncoding29791T29791-T-22AY.75.10.000361
noncoding29791T29791-T-22AY.840.000875
noncoding29791T29791CTC22AY.90.000135
noncoding29791T29791-T-22AY.9.20.000073
noncoding29791T29791-T-22AY.950.001522
noncoding29791T29791-T-22B0.000256
noncoding29791T29791CTC22B0.000256
noncoding29791T29791GTG22B.10.000018
noncoding29791T29791-T-22B.1.1.1660.066667
noncoding29791T29791-T-22B.1.1.3480.001592
noncoding29791T29791CTC22B.1.1.4340.000697
noncoding29791T29791ATA22B.1.1.5190.000079
noncoding29791T29791-T-22B.1.1.5230.003125
noncoding29791T29791CTC22B.1.177.310.022989
noncoding29791T29791CTC22B.1.177.860.000367
noncoding29791T29791-T-22B.1.2100.004264
noncoding29791T29791CTC22B.1.2580.000133
noncoding29791T29791GTG22B.1.4290.000047
noncoding29791T29791-T-22B.1.6210.000177
noncoding29791T29791-T-22B.390.004662
noncoding29791T29791ATA22P.10.000032
noncoding29791T29791-T-22P.1.10.000635
noncoding29791T29791-T-22P.1.150.000465
noncoding29791T29791CTC22P.1.170.000324
noncoding29791T29791-T-22P.1.70.000639
noncoding29791T29791CTC22P.1.70.000639
noncoding29791T29791ATA110.055556
noncoding29791T29791CTC11AD.20.000219
noncoding29791T29791-T-11AD.20.000219
noncoding29791T29791MTM11All0
noncoding29791T29791DTD11All0
noncoding29791T29791BTB11All0
noncoding29791T29791CTC11AY.1000.000046
noncoding29791T29791-T-11AY.1020.000027
noncoding29791T29791GTG11AY.1130.000142
noncoding29791T29791-T-11AY.1200.000037
noncoding29791T29791CTC11AY.1200.000037
noncoding29791T29791-T-11AY.120.10.000321
noncoding29791T29791CTC11AY.1210.000135
noncoding29791T29791CTC11AY.130.000161
noncoding29791T29791-T-11AY.200.000039
noncoding29791T29791ATA11AY.230.00007
noncoding29791T29791CTC11AY.230.00007
noncoding29791T29791ATA11AY.260.000028
noncoding29791T29791CTC11AY.270.000065
noncoding29791T29791-T-11AY.3.10.000085
noncoding29791T29791CTC11AY.320.000532
noncoding29791T29791CTC11AY.330.000067
noncoding29791T29791-T-11AY.380.000499
noncoding29791T29791-T-11AY.39.10.00004
noncoding29791T29791CTC11AY.400.000964
noncoding29791T29791-T-11AY.400.000964
noncoding29791T29791-T-11AY.420.00004
noncoding29791T29791GTG11AY.440.000006
noncoding29791T29791-T-11AY.450.000122
noncoding29791T29791-T-11AY.46.30.000934
noncoding29791T29791CTC11AY.46.60.000072
noncoding29791T29791CTC11AY.510.000909
noncoding29791T29791CTC11AY.590.00053
noncoding29791T29791GTG11AY.590.00053
noncoding29791T29791ATA11AY.620.000436
noncoding29791T29791CTC11AY.670.000464
noncoding29791T29791-T-11AY.810.001992
noncoding29791T29791-T-11AY.850.000427
noncoding29791T29791CTC11AY.9.10.000084
noncoding29791T29791-T-11AY.9.10.000084
noncoding29791T29791CTC11AY.900.000684
noncoding29791T29791-T-11AY.910.00073
noncoding29791T29791ATA11AY.940.000443
noncoding29791T29791-T-11AY.98.10.000048
noncoding29791T29791CTC11AY.98.10.000048
noncoding29791T29791ATA11B0.000128
noncoding29791T29791-T-11B.1.1.1700.001247
noncoding29791T29791-T-11B.1.1.1970.037037
noncoding29791T29791CTC11B.1.1.2140.000055
noncoding29791T29791-T-11B.1.1.2180.007692
noncoding29791T29791CTC11B.1.1.2220.000204
noncoding29791T29791-T-11B.1.1.2220.000204
noncoding29791T29791-T-11B.1.1.2770.000759
noncoding29791T29791CTC11B.1.1.280.000311
noncoding29791T29791-T-11B.1.1.280.000311
noncoding29791T29791-T-11B.1.1.3060.000438
noncoding29791T29791-T-11B.1.1.3110.000358
noncoding29791T29791-T-11B.1.1.330.000421
noncoding29791T29791-T-11B.1.1.3720.000689
noncoding29791T29791-T-11B.1.1.4130.006897
noncoding29791T29791-T-11B.1.1.4480.002033
noncoding29791T29791CTC11B.1.1.490.017544
noncoding29791T29791MTM11B.1.1.5190.00004
noncoding29791T29791CTC11B.1.1.5260.003546
noncoding29791T29791-T-11B.1.1.5280.004808
noncoding29791T29791-T-11B.1.1.540.003021
noncoding29791T29791DTD11B.1.1.70.000001
noncoding29791T29791-T-11B.1.1.990.02381
noncoding29791T29791-T-11B.1.160.330.004425
noncoding29791T29791CTC11B.1.177.170.000821
noncoding29791T29791-T-11B.1.177.330.001645
noncoding29791T29791CTC11B.1.177.330.001645
noncoding29791T29791CTC11B.1.177.540.000606
noncoding29791T29791CTC11B.1.177.60.000977
noncoding29791T29791-T-11B.1.177.630.002703
noncoding29791T29791CTC11B.1.177.650.000665
noncoding29791T29791ATA11B.1.20.000009
noncoding29791T29791-T-11B.1.258.170.000104
noncoding29791T29791CTC11B.1.30.002618
noncoding29791T29791-T-11B.1.351.20.000303
noncoding29791T29791CTC11B.1.36.160.001425
noncoding29791T29791CTC11B.1.36.290.000517
noncoding29791T29791-T-11B.1.36.310.001751
noncoding29791T29791-T-11B.1.36.80.001
noncoding29791T29791CTC11B.1.4020.009804
noncoding29791T29791ATA11B.1.4160.001269
noncoding29791T29791ATA11B.1.4290.000024
noncoding29791T29791-T-11B.1.466.10.007194
noncoding29791T29791GTG11B.1.4970.000315
noncoding29791T29791ATA11B.1.4970.000315
noncoding29791T29791-T-11B.1.5260.000024
noncoding29791T29791CTC11B.1.5260.000024
noncoding29791T29791CTC11B.1.5960.000087
noncoding29791T29791-T-11B.1.617.30.002985
noncoding29791T29791-T-11B.1.6270.00202
noncoding29791T29791-T-11B.1.6300.005236
noncoding29791T29791-T-11C.360.000911
noncoding29791T29791ATA11C.37.10.002618
noncoding29791T29791CTC11C.37.10.002618
noncoding29791T29791CTC11N.50.001767
noncoding29791T29791BTB11P.10.000016
noncoding29791T29791-T-11Q.20.000613
noncoding29791T29791ATA11R.10.00009