CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29784

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29784C29784TnoncodingCT60356035129784-29784
noncoding29784C29784-noncodingC-17771777129784-29784
noncoding29784C29784AnoncodingCA140140129784-29784
noncoding29784C29784GnoncodingCG3838129784-29784

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29784C29784TCT60356035All0.001154
noncoding29784C29784-C-17771777All0.00034
noncoding29784C29784-C-13191319B.1.1.70.001181
noncoding29784C29784TCT11491149B.1.1.70.001029
noncoding29784C29784TCT10411041B.1.1.2910.772829
noncoding29784C29784TCT542542B.10.004964
noncoding29784C29784TCT439439B.1.1270.964835
noncoding29784C29784TCT345345B.1.20.003038
noncoding29784C29784TCT261261B.1.617.20.000983
noncoding29784C29784TCT245245B.1.1.2630.38162
noncoding29784C29784TCT176176B.1.10.003193
noncoding29784C29784TCT147147B.1.4270.007423
noncoding29784C29784ACA140140All0.000027
noncoding29784C29784TCT109109AY.40.00017
noncoding29784C29784TCT100100B.1.3510.002973
noncoding29784C29784TCT8686B.1.1.2140.004769
noncoding29784C29784TCT8282AY.430.000363
noncoding29784C29784TCT7575B.1.2400.016167
noncoding29784C29784TCT7171AY.1020.001882
noncoding29784C29784TCT7070B.1.1770.000922
noncoding29784C29784TCT6767B.1.6370.004896
noncoding29784C29784TCT6464AY.440.00039
noncoding29784C29784TCT6363P.10.000993
noncoding29784C29784TCT5353AY.730.035263
noncoding29784C29784-C-4848B.1.617.20.000181
noncoding29784C29784TCT4646AY.250.000277
noncoding29784C29784TCT4545AY.540.004291
noncoding29784C29784GCG3838All0.000007
noncoding29784C29784TCT3737B.1.1.2900.672727
noncoding29784C29784ACA3737B.1.1.70.000033
noncoding29784C29784TCT3232B.1.4160.040609
noncoding29784C29784TCT2929B.1.1.3480.023089
noncoding29784C29784TCT2626AA.80.577778
noncoding29784C29784TCT2323AY.1030.000143
noncoding29784C29784TCT2323B.1.1.700.007844
noncoding29784C29784TCT2222B.1.258.110.00872
noncoding29784C29784TCT2222B.1.4290.000518
noncoding29784C29784-C-2121AY.440.000128
noncoding29784C29784TCT2121B.1.1600.000655
noncoding29784C29784-C-1919AY.920.005458
noncoding29784C29784TCT1919C.370.002205
noncoding29784C29784GCG1818B.1.1.70.000016
noncoding29784C29784ACA1818B.1.617.20.000068
noncoding29784C29784TCT1717B.1.1.2220.003468
noncoding29784C29784TCT1717B.1.6210.001505
noncoding29784C29784ACA1515AY.1020.000398
noncoding29784C29784-C-1414AY.250.000084
noncoding29784C29784TCT1414B.1.1.2840.001504
noncoding29784C29784TCT1414B.1.360.002043
noncoding29784C29784TCT1313AY.390.000321
noncoding29784C29784-C-1313AY.40.00002
noncoding29784C29784-C-1313B.10.000119
noncoding29784C29784-C-1313B.1.10.000236
noncoding29784C29784TCT1313B.1.1.5190.000516
noncoding29784C29784TCT1313B.1.177.440.006746
noncoding29784C29784TCT1313B.1.36.170.006423
noncoding29784C29784TCT1313B.1.5260.000306
noncoding29784C29784-C-1212B.1.3510.000357
noncoding29784C29784ACA1212P.10.000189
noncoding29784C29784TCT1111B.1.1.330.00463
noncoding29784C29784-C-1111B.1.20.000097
noncoding29784C29784-C-1111B.1.2580.000732
noncoding29784C29784TCT1111B.1.5960.000959
noncoding29784C29784GCG1111P.10.000173
noncoding29784C29784TCT1010AY.200.000389
noncoding29784C29784-C-1010B.1.177.860.001835
noncoding29784C29784-C-1010P.10.000158
noncoding29784C29784TCT99AY.260.000255
noncoding29784C29784-C-99AY.290.000142
noncoding29784C29784TCT99AY.30.00009
noncoding29784C29784ACA99AY.470.00028
noncoding29784C29784TCT99AY.50.000186
noncoding29784C29784-C-99AY.610.000943
noncoding29784C29784TCT99P.20.00168
noncoding29784C29784TCT88AY.470.000249
noncoding29784C29784-C-88B.1.1.3170.003294
noncoding29784C29784TCT88B.1.1.4200.008048
noncoding29784C29784-C-88B.1.5250.000905
noncoding29784C29784-C-88P.1.160.002993
noncoding29784C29784-C-88P.1.170.001294
noncoding29784C29784ACA77AY.1030.000043
noncoding29784C29784-C-77AY.390.000173
noncoding29784C29784-C-77AY.470.000218
noncoding29784C29784TCT77B.1.1.2160.006233
noncoding29784C29784TCT77B.1.177.810.001325
noncoding29784C29784TCT77B.1.177.820.003341
noncoding29784C29784TCT77B.1.2580.000466
noncoding29784C29784-C-77C.37.10.018325
noncoding29784C29784TCT77P.1.140.000335
noncoding29784C29784-C-66AY.1190.000212
noncoding29784C29784TCT66AY.330.000401
noncoding29784C29784-C-66AY.99.20.000553
noncoding29784C29784-C-66B.1.1600.000187
noncoding29784C29784-C-66B.1.2210.000426
noncoding29784C29784TCT66P.1.70.001916
noncoding29784C29784-C-55AY.1030.000031
noncoding29784C29784ACA55AY.1190.000177
noncoding29784C29784TCT55AY.420.000201
noncoding29784C29784-C-55AY.430.000022
noncoding29784C29784TCT55AY.610.000524
noncoding29784C29784TCT55AY.75.10.000902
noncoding29784C29784TCT55AY.9.20.000184
noncoding29784C29784-C-55B.1.2430.000348
noncoding29784C29784TCT55B.1.36.290.002587
noncoding29784C29784-C-55B.1.6190.004355
noncoding29784C29784-C-55C.10.011962
noncoding29784C29784-C-55Q.10.000632
noncoding29784C29784TCT44A.2.50.001996
noncoding29784C29784TCT44AD.20.000876
noncoding29784C29784TCT44AY.1180.000251
noncoding29784C29784TCT44AY.140.000352
noncoding29784C29784TCT44AY.230.000279
noncoding29784C29784ACA44AY.390.000099
noncoding29784C29784ACA44AY.440.000024
noncoding29784C29784TCT44B.1.1.3180.001207
noncoding29784C29784-C-44B.1.1770.000053
noncoding29784C29784TCT44B.1.2430.000278
noncoding29784C29784-C-44B.1.4290.000094
noncoding29784C29784TCT44B.1.4700.005618
noncoding29784C29784TCT33A0.001161
noncoding29784C29784-C-33AY.1090.002219
noncoding29784C29784-C-33AY.230.000209
noncoding29784C29784-C-33AY.30.00003
noncoding29784C29784ACA33AY.40.000005
noncoding29784C29784TCT33AY.460.000312
noncoding29784C29784-C-33AY.50.000062
noncoding29784C29784-C-33AY.540.000286
noncoding29784C29784TCT33AY.60.000123
noncoding29784C29784-C-33AY.700.000626
noncoding29784C29784ACA33B.10.000027
noncoding29784C29784TCT33B.1.1.280.000934
noncoding29784C29784TCT33B.1.1.4280.028302
noncoding29784C29784-C-33B.1.1.460.0131
noncoding29784C29784-C-33B.1.1.5190.000119
noncoding29784C29784TCT33B.1.1.520.036585
noncoding29784C29784TCT33B.1.1690.044776
noncoding29784C29784TCT33B.1.2340.000396
noncoding29784C29784TCT33B.1.36.80.003
noncoding29784C29784TCT33B.1.5030.007463
noncoding29784C29784TCT33B.1.5170.001281
noncoding29784C29784-C-33B.1.5950.000783
noncoding29784C29784TCT33B.1.595.10.017544
noncoding29784C29784TCT33B.400.001093
noncoding29784C29784TCT33C.160.003181
noncoding29784C29784-C-33P.20.00056
noncoding29784C29784-C-22A0.000774
noncoding29784C29784-C-22AY.1000.000092
noncoding29784C29784-C-22AY.1020.000053
noncoding29784C29784-C-22AY.1170.000169
noncoding29784C29784TCT22AY.1200.000074
noncoding29784C29784TCT22AY.190.002281
noncoding29784C29784-C-22AY.200.000078
noncoding29784C29784TCT22AY.34.10.00102
noncoding29784C29784TCT22AY.350.000466
noncoding29784C29784GCG22AY.440.000012
noncoding29784C29784TCT22AY.450.000243
noncoding29784C29784-C-22AY.46.20.001271
noncoding29784C29784TCT22AY.46.60.000144
noncoding29784C29784ACA22AY.50.000041
noncoding29784C29784-C-22AY.5.30.000675
noncoding29784C29784TCT22AY.5.40.000553
noncoding29784C29784TCT22AY.650.001066
noncoding29784C29784TCT22AY.680.000547
noncoding29784C29784-C-22AY.75.10.000361
noncoding29784C29784-C-22AY.840.000875
noncoding29784C29784-C-22AY.950.001522
noncoding29784C29784-C-22AY.98.10.000097
noncoding29784C29784-C-22B0.000256
noncoding29784C29784TCT22B.1.1.10.000653
noncoding29784C29784-C-22B.1.1.1660.066667
noncoding29784C29784TCT22B.1.1.2070.002364
noncoding29784C29784TCT22B.1.1.3060.000877
noncoding29784C29784-C-22B.1.1.3110.000716
noncoding29784C29784TCT22B.1.1.3120.003824
noncoding29784C29784-C-22B.1.1.3480.001592
noncoding29784C29784TCT22B.1.1.3730.047619
noncoding29784C29784TCT22B.1.1.4480.004065
noncoding29784C29784TCT22B.1.1.500.001358
noncoding29784C29784-C-22B.1.1.5230.003125
noncoding29784C29784TCT22B.1.1.630.000772
noncoding29784C29784TCT22B.1.1040.00738
noncoding29784C29784TCT22B.1.177.170.001642
noncoding29784C29784-C-22B.1.177.330.003289
noncoding29784C29784TCT22B.1.177.40.000422
noncoding29784C29784TCT22B.1.177.600.000437
noncoding29784C29784TCT22B.1.177.690.002967
noncoding29784C29784TCT22B.1.2210.000142
noncoding29784C29784TCT22B.1.3110.000549
noncoding29784C29784TCT22B.1.351.20.000605
noncoding29784C29784TCT22B.1.3690.00057
noncoding29784C29784TCT22B.1.4090.001563
noncoding29784C29784TCT22B.1.466.20.000782
noncoding29784C29784TCT22B.1.4740.003802
noncoding29784C29784TCT22B.1.4990.002101
noncoding29784C29784-C-22B.1.5260.000047
noncoding29784C29784-C-22B.1.6210.000177
noncoding29784C29784TCT22B.1.621.10.001012
noncoding29784C29784-C-22B.390.004662
noncoding29784C29784TCT22B.570.030303
noncoding29784C29784TCT22C.36.20.068966
noncoding29784C29784TCT22D.20.00015
noncoding29784C29784-C-22P.1.10.000635
noncoding29784C29784TCT22P.1.100.000539
noncoding29784C29784TCT22P.1.120.000968
noncoding29784C29784-C-22P.1.150.000465
noncoding29784C29784-C-22P.1.70.000639
noncoding29784C29784TCT22Q.10.000253
noncoding29784C29784ACA11A0.000387
noncoding29784C29784TCT11A.10.000282
noncoding29784C29784-C-11A.10.000282
noncoding29784C29784TCT11A.290.005319
noncoding29784C29784GCG11AY.1000.000046
noncoding29784C29784TCT11AY.1130.000142
noncoding29784C29784ACA11AY.1130.000142
noncoding29784C29784GCG11AY.1130.000142
noncoding29784C29784-C-11AY.1130.000142
noncoding29784C29784-C-11AY.1180.000063
noncoding29784C29784-C-11AY.1200.000037
noncoding29784C29784-C-11AY.120.10.000321
noncoding29784C29784TCT11AY.120.10.000321
noncoding29784C29784-C-11AY.140.000088
noncoding29784C29784TCT11AY.16.10.00047
noncoding29784C29784TCT11AY.20.000356
noncoding29784C29784TCT11AY.23.10.000417
noncoding29784C29784ACA11AY.250.000006
noncoding29784C29784-C-11AY.260.000028
noncoding29784C29784TCT11AY.290.000016
noncoding29784C29784ACA11AY.29.10.000221
noncoding29784C29784ACA11AY.30.00001
noncoding29784C29784-C-11AY.3.10.000085
noncoding29784C29784TCT11AY.3.10.000085
noncoding29784C29784-C-11AY.300.000396
noncoding29784C29784TCT11AY.340.000097
noncoding29784C29784TCT11AY.370.000316
noncoding29784C29784-C-11AY.39.10.00004
noncoding29784C29784TCT11AY.4.20.000022
noncoding29784C29784-C-11AY.4.2.10.000149
noncoding29784C29784TCT11AY.400.000964
noncoding29784C29784-C-11AY.400.000964
noncoding29784C29784-C-11AY.420.00004
noncoding29784C29784ACA11AY.430.000004
noncoding29784C29784ACA11AY.450.000122
noncoding29784C29784-C-11AY.450.000122
noncoding29784C29784ACA11AY.460.000104
noncoding29784C29784-C-11AY.460.000104
noncoding29784C29784-C-11AY.46.30.000934
noncoding29784C29784-C-11AY.46.40.000165
noncoding29784C29784-C-11AY.590.00053
noncoding29784C29784-C-11AY.620.000436
noncoding29784C29784TCT11AY.620.000436
noncoding29784C29784ACA11AY.690.000187
noncoding29784C29784TCT11AY.690.000187
noncoding29784C29784-C-11AY.70.000196
noncoding29784C29784TCT11AY.70.000196
noncoding29784C29784-C-11AY.750.000056
noncoding29784C29784-C-11AY.810.001992
noncoding29784C29784-C-11AY.850.000427
noncoding29784C29784-C-11AY.870.000833
noncoding29784C29784-C-11AY.90.000068
noncoding29784C29784TCT11AY.90.000068
noncoding29784C29784-C-11AY.9.10.000084
noncoding29784C29784-C-11AY.9.20.000037
noncoding29784C29784ACA11AY.9.20.000037
noncoding29784C29784TCT11AY.950.000761
noncoding29784C29784TCT11AY.970.001701
noncoding29784C29784-C-11AY.980.000079
noncoding29784C29784TCT11AY.980.000079
noncoding29784C29784TCT11AY.98.10.000048
noncoding29784C29784TCT11AY.99.10.001553
noncoding29784C29784TCT11AZ.10.000867
noncoding29784C29784TCT11B0.000128
noncoding29784C29784GCG11B.1.10.000018
noncoding29784C29784ACA11B.1.10.000018
noncoding29784C29784TCT11B.1.1.1170.009709
noncoding29784C29784TCT11B.1.1.1220.045455
noncoding29784C29784TCT11B.1.1.1700.001247
noncoding29784C29784-C-11B.1.1.1700.001247
noncoding29784C29784-C-11B.1.1.1970.037037
noncoding29784C29784-C-11B.1.1.2140.000055
noncoding29784C29784ACA11B.1.1.2160.00089
noncoding29784C29784-C-11B.1.1.2180.007692
noncoding29784C29784-C-11B.1.1.2220.000204
noncoding29784C29784GCG11B.1.1.2430.004082
noncoding29784C29784TCT11B.1.1.2680.014925
noncoding29784C29784TCT11B.1.1.2690.001353
noncoding29784C29784-C-11B.1.1.2770.000759
noncoding29784C29784TCT11B.1.1.2770.000759
noncoding29784C29784-C-11B.1.1.280.000311
noncoding29784C29784TCT11B.1.1.3040.002809
noncoding29784C29784-C-11B.1.1.3060.000438
noncoding29784C29784-C-11B.1.1.330.000421
noncoding29784C29784TCT11B.1.1.3350.012987
noncoding29784C29784TCT11B.1.1.370.000193
noncoding29784C29784TCT11B.1.1.3720.000689
noncoding29784C29784TCT11B.1.1.390.00051
noncoding29784C29784TCT11B.1.1.3980.003226
noncoding29784C29784-C-11B.1.1.4130.006897
noncoding29784C29784TCT11B.1.1.4610.012048
noncoding29784C29784-C-11B.1.1.5280.004808
noncoding29784C29784-C-11B.1.1.540.003021
noncoding29784C29784TCT11B.1.1.540.003021
noncoding29784C29784-C-11B.1.1.990.02381
noncoding29784C29784-C-11B.1.1110.001175
noncoding29784C29784-C-11B.1.160.330.004425
noncoding29784C29784TCT11B.1.177.120.000152
noncoding29784C29784TCT11B.1.177.160.000664
noncoding29784C29784TCT11B.1.177.350.000691
noncoding29784C29784TCT11B.1.177.570.000281
noncoding29784C29784TCT11B.1.177.70.000165
noncoding29784C29784TCT11B.1.177.770.000726
noncoding29784C29784TCT11B.1.1990.004132
noncoding29784C29784ACA11B.1.20.000009
noncoding29784C29784-C-11B.1.2100.002132
noncoding29784C29784TCT11B.1.2100.002132
noncoding29784C29784TCT11B.1.221.30.000833
noncoding29784C29784GCG11B.1.2340.000132
noncoding29784C29784ACA11B.1.2420.018868
noncoding29784C29784TCT11B.1.2890.00266
noncoding29784C29784TCT11B.1.3200.001245
noncoding29784C29784TCT11B.1.3240.001605
noncoding29784C29784ACA11B.1.3510.00003
noncoding29784C29784-C-11B.1.351.20.000303
noncoding29784C29784-C-11B.1.36.310.001751
noncoding29784C29784-C-11B.1.36.80.001
noncoding29784C29784TCT11B.1.3670.000792
noncoding29784C29784TCT11B.1.3890.001002
noncoding29784C29784ACA11B.1.3960.000706
noncoding29784C29784TCT11B.1.4220.000812
noncoding29784C29784TCT11B.1.438.10.000107
noncoding29784C29784TCT11B.1.4410.009615
noncoding29784C29784-C-11B.1.466.10.007194
noncoding29784C29784TCT11B.1.564.10.001577
noncoding29784C29784TCT11B.1.5650.00081
noncoding29784C29784GCG11B.1.5760.000907
noncoding29784C29784TCT11B.1.6060.006024
noncoding29784C29784-C-11B.1.617.30.002985
noncoding29784C29784TCT11B.1.6190.000871
noncoding29784C29784-C-11B.1.6270.00202
noncoding29784C29784-C-11B.1.6300.005236
noncoding29784C29784TCT11B.1.80.001972
noncoding29784C29784TCT11B.1.9.50.005682
noncoding29784C29784TCT11B.260.014706
noncoding29784C29784TCT11B.280.003279
noncoding29784C29784TCT11B.4.20.066667
noncoding29784C29784TCT11B.4.70.010101
noncoding29784C29784TCT11C.140.004329
noncoding29784C29784TCT11C.360.000911
noncoding29784C29784-C-11C.360.000911
noncoding29784C29784-C-11C.370.000116
noncoding29784C29784ACA11C.370.000116
noncoding29784C29784TCT11C.400.027778
noncoding29784C29784ACA11D.20.000075
noncoding29784C29784TCT11N.90.005952
noncoding29784C29784ACA11P.1.10.000318
noncoding29784C29784ACA11P.1.160.000374
noncoding29784C29784TCT11P.1.160.000374
noncoding29784C29784ACA11P.1.20.001156
noncoding29784C29784GCG11P.1.20.001156
noncoding29784C29784TCT11P.1.60.001946
noncoding29784C29784-C-11Q.20.000613
noncoding29784C29784TCT11Q.30.000145
noncoding29784C29784TCT11Q.40.000455
noncoding29784C29784TCT11R.10.00009