CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29775

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29775T29775-noncodingT-1062410624129775-29775
noncoding29775T29775CnoncodingTC643643129775-29775
noncoding29775T29775AnoncodingTA527527129775-29775
noncoding29775T29775GnoncodingTG158158129775-29775

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29775T29775-T-1062410624All0.002032
noncoding29775T29775-T-37053705B.1.5250.41926
noncoding29775T29775-T-17621762B.1.1.3110.631089
noncoding29775T29775-T-16231623B.1.1.70.001453
noncoding29775T29775-T-11011101AY.40.001714
noncoding29775T29775CTC643643All0.000123
noncoding29775T29775ATA527527All0.000101
noncoding29775T29775CTC388388B.1.1.70.000347
noncoding29775T29775ATA351351AY.250.002111
noncoding29775T29775-T-258258AY.50.005327
noncoding29775T29775-T-223223B.1.20.001964
noncoding29775T29775-T-161161B.1.3510.004786
noncoding29775T29775GTG158158All0.00003
noncoding29775T29775-T-145145B.1.617.20.000546
noncoding29775T29775GTG129129B.1.1.70.000115
noncoding29775T29775-T-125125B.1.466.10.899281
noncoding29775T29775-T-105105AY.1030.000652
noncoding29775T29775-T-9696B.1.1770.001264
noncoding29775T29775-T-8585AY.470.002644
noncoding29775T29775-T-7878AY.250.000469
noncoding29775T29775-T-7070B.10.000641
noncoding29775T29775-T-6262AY.30.000617
noncoding29775T29775ATA5858B.1.1.70.000052
noncoding29775T29775-T-5757AY.430.000253
noncoding29775T29775-T-5757B.1.1600.001778
noncoding29775T29775-T-4040B.1.10.000726
noncoding29775T29775-T-3939AY.440.000237
noncoding29775T29775-T-3636B.1.1.3510.100559
noncoding29775T29775CTC3434AY.980.002686
noncoding29775T29775-T-2929P.10.000457
noncoding29775T29775-T-2828AY.290.000442
noncoding29775T29775ATA2828B.1.6340.09589
noncoding29775T29775-T-2424B.1.2430.00167
noncoding29775T29775-T-2222B.1.1.3680.067901
noncoding29775T29775CTC2020B.1.617.20.000075
noncoding29775T29775-T-1919AY.920.005458
noncoding29775T29775-T-1818B.1.2580.001198
noncoding29775T29775-T-1818C.370.002089
noncoding29775T29775-T-1717AY.1020.000451
noncoding29775T29775CTC1717AY.440.000103
noncoding29775T29775-T-1717B.1.177.560.011348
noncoding29775T29775-T-1616AY.420.000644
noncoding29775T29775-T-1515AY.850.006408
noncoding29775T29775GTG1414AY.40.000022
noncoding29775T29775CTC1414AY.430.000062
noncoding29775T29775-T-1313AY.60.000535
noncoding29775T29775-T-1313AY.610.001362
noncoding29775T29775-T-1313B.1.2210.000923
noncoding29775T29775-T-1313P.1.160.004863
noncoding29775T29775-T-1212AY.1190.000424
noncoding29775T29775-T-1212B.1.1.2220.002448
noncoding29775T29775CTC1212B.1.4290.000282
noncoding29775T29775-T-1111AY.1000.000506
noncoding29775T29775-T-1111AY.260.000311
noncoding29775T29775-T-1111AY.390.000272
noncoding29775T29775ATA1111B.1.1770.000145
noncoding29775T29775-T-1111B.1.177.860.002018
noncoding29775T29775CTC1010AY.40.000016
noncoding29775T29775-T-1010AY.4.20.000217
noncoding29775T29775-T-1010AY.75.10.001803
noncoding29775T29775-T-99B.1.160.140.019068
noncoding29775T29775CTC99B.1.20.000079
noncoding29775T29775-T-99P.1.170.001456
noncoding29775T29775CTC88AY.1190.000282
noncoding29775T29775ATA88AY.290.000126
noncoding29775T29775-T-88AY.450.000973
noncoding29775T29775-T-88AY.670.003714
noncoding29775T29775-T-88AY.740.000925
noncoding29775T29775-T-88AY.98.10.000387
noncoding29775T29775ATA88B.10.000073
noncoding29775T29775-T-88B.1.1.3170.003294
noncoding29775T29775-T-88B.1.4290.000188
noncoding29775T29775-T-88B.1.5260.000188
noncoding29775T29775ATA88B.1.617.20.00003
noncoding29775T29775CTC88C.370.000929
noncoding29775T29775-T-88C.37.10.020942
noncoding29775T29775CTC77AY.30.00007
noncoding29775T29775-T-77AY.340.000679
noncoding29775T29775-T-77AY.46.40.001152
noncoding29775T29775-T-77B.1.1.280.002179
noncoding29775T29775CTC77B.1.1.3690.003124
noncoding29775T29775-T-77B.1.36.220.008454
noncoding29775T29775CTC77B.1.5260.000165
noncoding29775T29775-T-66AY.1180.000376
noncoding29775T29775-T-66AY.1200.000223
noncoding29775T29775CTC66AY.270.000388
noncoding29775T29775-T-66B.1.1.2140.000333
noncoding29775T29775-T-66B.1.1.5190.000238
noncoding29775T29775CTC66B.1.1770.000079
noncoding29775T29775CTC55AY.1030.000031
noncoding29775T29775-T-55AY.1170.000423
noncoding29775T29775-T-55AY.200.000194
noncoding29775T29775-T-55AY.230.000349
noncoding29775T29775-T-55AY.540.000477
noncoding29775T29775-T-55AY.750.00028
noncoding29775T29775-T-55B0.000639
noncoding29775T29775CTC55B.10.000046
noncoding29775T29775ATA55B.1.10.000091
noncoding29775T29775ATA55B.1.177.330.008224
noncoding29775T29775CTC55B.1.3510.000149
noncoding29775T29775-T-55B.1.36.310.008757
noncoding29775T29775-T-55B.1.6190.004355
noncoding29775T29775-T-55B.1.6210.000443
noncoding29775T29775-T-55C.10.011962
noncoding29775T29775-T-55Q.10.000632
noncoding29775T29775ATA44AY.390.000099
noncoding29775T29775-T-44AY.950.003044
noncoding29775T29775-T-44B.1.1.2880.007663
noncoding29775T29775-T-44B.1.1.330.001684
noncoding29775T29775-T-44B.1.1.4640.005891
noncoding29775T29775-T-44B.1.36.290.002069
noncoding29775T29775-T-44D.20.0003
noncoding29775T29775-T-44P.1.120.001936
noncoding29775T29775-T-33AY.1090.002219
noncoding29775T29775-T-33AY.140.000264
noncoding29775T29775CTC33AY.250.000018
noncoding29775T29775-T-33AY.3.10.000256
noncoding29775T29775-T-33AY.300.001187
noncoding29775T29775-T-33AY.350.000699
noncoding29775T29775-T-33AY.460.000312
noncoding29775T29775-T-33AY.700.000626
noncoding29775T29775-T-33AY.840.001312
noncoding29775T29775-T-33AY.9.20.00011
noncoding29775T29775-T-33AY.99.20.000276
noncoding29775T29775-T-33B.1.1.10.00098
noncoding29775T29775-T-33B.1.1.2360.02069
noncoding29775T29775CTC33B.1.1.3170.001235
noncoding29775T29775-T-33B.1.1.4280.028302
noncoding29775T29775-T-33B.1.1.460.0131
noncoding29775T29775ATA33B.1.177.530.007177
noncoding29775T29775CTC33B.1.177.860.00055
noncoding29775T29775CTC33B.1.2210.000213
noncoding29775T29775-T-33B.1.258.170.000312
noncoding29775T29775-T-33B.1.5950.000783
noncoding29775T29775CTC33B.1.5960.000261
noncoding29775T29775-T-33B.1.9.40.018405
noncoding29775T29775-T-33C.360.002732
noncoding29775T29775-T-33P.1.150.000697
noncoding29775T29775CTC33P.1.160.001122
noncoding29775T29775CTC33P.1.70.000958
noncoding29775T29775-T-22A0.000774
noncoding29775T29775ATA22AY.1030.000012
noncoding29775T29775-T-22AY.1100.000225
noncoding29775T29775-T-22AY.120.000632
noncoding29775T29775CTC22AY.1210.000271
noncoding29775T29775ATA22AY.200.000078
noncoding29775T29775CTC22AY.260.000057
noncoding29775T29775CTC22AY.29.10.000441
noncoding29775T29775ATA22AY.30.00002
noncoding29775T29775CTC22AY.4.20.000043
noncoding29775T29775-T-22AY.4.2.10.000298
noncoding29775T29775-T-22AY.400.001929
noncoding29775T29775-T-22AY.46.30.001867
noncoding29775T29775-T-22AY.480.00093
noncoding29775T29775CTC22AY.50.000041
noncoding29775T29775-T-22AY.5.30.000675
noncoding29775T29775-T-22AY.620.000871
noncoding29775T29775GTG22B.10.000018
noncoding29775T29775CTC22B.1.10.000036
noncoding29775T29775-T-22B.1.1.1660.066667
noncoding29775T29775CTC22B.1.1.1740.006757
noncoding29775T29775-T-22B.1.1.2790.002242
noncoding29775T29775-T-22B.1.1.2940.002532
noncoding29775T29775-T-22B.1.1.3060.000877
noncoding29775T29775-T-22B.1.1.3480.001592
noncoding29775T29775-T-22B.1.1.3540.008772
noncoding29775T29775-T-22B.1.1.370.000386
noncoding29775T29775-T-22B.1.1.5230.003125
noncoding29775T29775CTC22B.1.1600.000062
noncoding29775T29775-T-22B.1.177.750.002081
noncoding29775T29775ATA22B.1.177.830.002963
noncoding29775T29775ATA22B.1.177.860.000367
noncoding29775T29775GTG22B.1.20.000018
noncoding29775T29775-T-22B.1.2060.001631
noncoding29775T29775-T-22B.1.2100.004264
noncoding29775T29775CTC22B.1.2580.000133
noncoding29775T29775ATA22B.1.2580.000133
noncoding29775T29775CTC22B.1.258.30.00335
noncoding29775T29775-T-22B.1.2980.004228
noncoding29775T29775ATA22B.1.3670.001585
noncoding29775T29775-T-22B.1.4000.000858
noncoding29775T29775-T-22B.1.416.10.003125
noncoding29775T29775-T-22B.1.4410.019231
noncoding29775T29775-T-22B.1.4600.035714
noncoding29775T29775-T-22B.1.5960.000174
noncoding29775T29775-T-22B.1.6370.000146
noncoding29775T29775CTC22B.1.6370.000146
noncoding29775T29775-T-22B.310.007463
noncoding29775T29775-T-22B.390.004662
noncoding29775T29775-T-22B.400.000729
noncoding29775T29775ATA22C.180.005181
noncoding29775T29775-T-22C.30.015267
noncoding29775T29775ATA22C.360.001821
noncoding29775T29775-T-22C.380.016129
noncoding29775T29775CTC22P.10.000032
noncoding29775T29775-T-22P.1.10.000635
noncoding29775T29775-T-22P.1.140.000096
noncoding29775T29775-T-22P.1.70.000639
noncoding29775T29775-T-11AK.20.045455
noncoding29775T29775CTC11AY.1000.000046
noncoding29775T29775-T-11AY.1060.000335
noncoding29775T29775CTC11AY.110.001339
noncoding29775T29775-T-11AY.1110.000183
noncoding29775T29775CTC11AY.1130.000142
noncoding29775T29775-T-11AY.1130.000142
noncoding29775T29775CTC11AY.1140.000231
noncoding29775T29775-T-11AY.1140.000231
noncoding29775T29775GTG11AY.1170.000085
noncoding29775T29775ATA11AY.130.000161
noncoding29775T29775CTC11AY.200.000039
noncoding29775T29775CTC11AY.23.10.000417
noncoding29775T29775-T-11AY.240.000431
noncoding29775T29775-T-11AY.29.10.000221
noncoding29775T29775ATA11AY.330.000067
noncoding29775T29775-T-11AY.330.000067
noncoding29775T29775-T-11AY.360.000148
noncoding29775T29775GTG11AY.390.000025
noncoding29775T29775-T-11AY.39.10.00004
noncoding29775T29775ATA11AY.40.000002
noncoding29775T29775-T-11AY.4.50.000107
noncoding29775T29775ATA11AY.430.000004
noncoding29775T29775GTG11AY.440.000006
noncoding29775T29775ATA11AY.450.000122
noncoding29775T29775CTC11AY.460.000104
noncoding29775T29775ATA11AY.46.60.000072
noncoding29775T29775-T-11AY.46.60.000072
noncoding29775T29775-T-11AY.5.40.000277
noncoding29775T29775-T-11AY.510.000909
noncoding29775T29775CTC11AY.550.000917
noncoding29775T29775-T-11AY.560.001605
noncoding29775T29775-T-11AY.590.00053
noncoding29775T29775CTC11AY.610.000105
noncoding29775T29775ATA11AY.620.000436
noncoding29775T29775-T-11AY.70.000196
noncoding29775T29775CTC11AY.7.10.000113
noncoding29775T29775CTC11AY.700.000209
noncoding29775T29775-T-11AY.800.001129
noncoding29775T29775-T-11AY.810.001992
noncoding29775T29775-T-11AY.870.000833
noncoding29775T29775-T-11AY.90.000068
noncoding29775T29775-T-11AY.9.10.000084
noncoding29775T29775-T-11AY.980.000079
noncoding29775T29775CTC11AY.98.10.000048
noncoding29775T29775GTG11B.1.10.000018
noncoding29775T29775ATA11B.1.1.10.000327
noncoding29775T29775-T-11B.1.1.100.001115
noncoding29775T29775-T-11B.1.1.1610.003534
noncoding29775T29775-T-11B.1.1.1700.001247
noncoding29775T29775-T-11B.1.1.1740.003378
noncoding29775T29775CTC11B.1.1.1890.001513
noncoding29775T29775-T-11B.1.1.1970.037037
noncoding29775T29775-T-11B.1.1.2180.007692
noncoding29775T29775-T-11B.1.1.2210.010101
noncoding29775T29775-T-11B.1.1.2290.005747
noncoding29775T29775-T-11B.1.1.250.000569
noncoding29775T29775CTC11B.1.1.250.000569
noncoding29775T29775ATA11B.1.1.2650.003155
noncoding29775T29775-T-11B.1.1.2770.000759
noncoding29775T29775ATA11B.1.1.3170.000412
noncoding29775T29775-T-11B.1.1.3370.003597
noncoding29775T29775-T-11B.1.1.390.00051
noncoding29775T29775-T-11B.1.1.4130.006897
noncoding29775T29775-T-11B.1.1.4320.001266
noncoding29775T29775-T-11B.1.1.5260.003546
noncoding29775T29775-T-11B.1.1.5280.004808
noncoding29775T29775-T-11B.1.1.540.003021
noncoding29775T29775-T-11B.1.1.700.000341
noncoding29775T29775-T-11B.1.1.990.02381
noncoding29775T29775-T-11B.1.1100.004525
noncoding29775T29775-T-11B.1.1110.001175
noncoding29775T29775ATA11B.1.1600.000031
noncoding29775T29775GTG11B.1.1600.000031
noncoding29775T29775CTC11B.1.160.120.00641
noncoding29775T29775-T-11B.1.160.330.004425
noncoding29775T29775-T-11B.1.177.110.001698
noncoding29775T29775-T-11B.1.177.120.000152
noncoding29775T29775-T-11B.1.177.320.00135
noncoding29775T29775-T-11B.1.177.330.001645
noncoding29775T29775-T-11B.1.177.420.000894
noncoding29775T29775-T-11B.1.177.440.000519
noncoding29775T29775-T-11B.1.177.570.000281
noncoding29775T29775-T-11B.1.177.60.000977
noncoding29775T29775GTG11B.1.177.620.001192
noncoding29775T29775CTC11B.1.177.620.001192
noncoding29775T29775ATA11B.1.177.630.002703
noncoding29775T29775CTC11B.1.177.650.000665
noncoding29775T29775ATA11B.1.177.750.001041
noncoding29775T29775-T-11B.1.177.810.000189
noncoding29775T29775GTG11B.1.177.860.000183
noncoding29775T29775-T-11B.1.1920.009259
noncoding29775T29775ATA11B.1.20.000009
noncoding29775T29775-T-11B.1.2220.001692
noncoding29775T29775-T-11B.1.2340.000132
noncoding29775T29775-T-11B.1.2400.000216
noncoding29775T29775ATA11B.1.258.140.00098
noncoding29775T29775-T-11B.1.2600.003344
noncoding29775T29775-T-11B.1.2810.021739
noncoding29775T29775GTG11B.1.3510.00003
noncoding29775T29775ATA11B.1.3510.00003
noncoding29775T29775-T-11B.1.351.20.000303
noncoding29775T29775-T-11B.1.351.30.000876
noncoding29775T29775-T-11B.1.351.50.0006
noncoding29775T29775CTC11B.1.351.50.0006
noncoding29775T29775-T-11B.1.360.000146
noncoding29775T29775-T-11B.1.36.190.009259
noncoding29775T29775-T-11B.1.36.80.001
noncoding29775T29775-T-11B.1.3620.001541
noncoding29775T29775CTC11B.1.3670.000792
noncoding29775T29775CTC11B.1.4160.001269
noncoding29775T29775ATA11B.1.4160.001269
noncoding29775T29775-T-11B.1.4160.001269
noncoding29775T29775CTC11B.1.4320.011236
noncoding29775T29775CTC11B.1.4410.009615
noncoding29775T29775ATA11B.1.4620.007246
noncoding29775T29775-T-11B.1.4620.007246
noncoding29775T29775GTG11B.1.4970.000315
noncoding29775T29775-T-11B.1.5090.000866
noncoding29775T29775-T-11B.1.5760.000907
noncoding29775T29775-T-11B.1.5820.000491
noncoding29775T29775-T-11B.1.617.10.000129
noncoding29775T29775-T-11B.1.617.30.002985
noncoding29775T29775CTC11B.1.6190.000871
noncoding29775T29775GTG11B.1.6190.000871
noncoding29775T29775-T-11B.1.6300.005236
noncoding29775T29775-T-11B.1.9.50.005682
noncoding29775T29775CTC11B.30.000831
noncoding29775T29775-T-11B.550.00295
noncoding29775T29775-T-11B.60.00091
noncoding29775T29775GTG11C.360.000911
noncoding29775T29775CTC11C.360.000911
noncoding29775T29775-T-11C.36.30.000567
noncoding29775T29775CTC11C.36.30.000567
noncoding29775T29775CTC11D.20.000075
noncoding29775T29775-T-11K.30.006173
noncoding29775T29775-T-11L.30.003546
noncoding29775T29775-T-11N.40.004255
noncoding29775T29775-T-11N.50.001767
noncoding29775T29775ATA11P.1.10.000318
noncoding29775T29775CTC11P.1.10.000318
noncoding29775T29775-T-11P.1.100.000269
noncoding29775T29775-T-11P.20.000187
noncoding29775T29775-T-11P.60.003145
noncoding29775T29775CTC11Q.10.000126
noncoding29775T29775ATA11Q.10.000126
noncoding29775T29775CTC11Q.20.000613
noncoding29775T29775-T-11Q.20.000613
noncoding29775T29775-T-11R.10.00009
noncoding29775T29775-T-11W.40.001351