CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29772

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29772T29772-noncodingT-1292912929129772-29772
noncoding29772T29772CnoncodingTC13471347129772-29772
noncoding29772T29772AnoncodingTA244244129772-29772
noncoding29772T29772GnoncodingTG3636129772-29772

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29772T29772-T-1292912929All0.002473
noncoding29772T29772-T-37173717B.1.5250.420618
noncoding29772T29772-T-23082308B.1.1.70.002066
noncoding29772T29772-T-17621762B.1.1.3110.631089
noncoding29772T29772CTC13471347All0.000258
noncoding29772T29772-T-13271327AY.40.002065
noncoding29772T29772-T-794794AY.380.396405
noncoding29772T29772CTC761761B.1.617.20.002865
noncoding29772T29772CTC378378B.1.1.70.000338
noncoding29772T29772-T-268268AY.50.005534
noncoding29772T29772-T-247247B.1.20.002175
noncoding29772T29772ATA244244All0.000047
noncoding29772T29772-T-181181B.1.3510.00538
noncoding29772T29772-T-175175B.1.617.20.000659
noncoding29772T29772-T-142142AY.1030.000882
noncoding29772T29772-T-129129B.10.001182
noncoding29772T29772-T-125125B.1.466.10.899281
noncoding29772T29772-T-119119B.1.1770.001567
noncoding29772T29772ATA9696AY.380.047928
noncoding29772T29772-T-8787AY.430.000385
noncoding29772T29772-T-8686AY.470.002675
noncoding29772T29772-T-8282AY.250.000493
noncoding29772T29772-T-6969B.1.1600.002152
noncoding29772T29772-T-6767B.1.10.001215
noncoding29772T29772-T-6666AY.30.000656
noncoding29772T29772ATA5555B.1.1.70.000049
noncoding29772T29772-T-4545AY.440.000274
noncoding29772T29772-T-4343B.1.2430.002992
noncoding29772T29772-T-3838C.370.00441
noncoding29772T29772-T-3838P.10.000599
noncoding29772T29772-T-3737AY.290.000584
noncoding29772T29772GTG3636All0.000007
noncoding29772T29772-T-3636B.1.1.3510.100559
noncoding29772T29772CTC3232AY.40.00005
noncoding29772T29772CTC3131AY.140.002728
noncoding29772T29772-T-2323AY.1020.00061
noncoding29772T29772-T-2222B.1.1.3680.067901
noncoding29772T29772-T-2222B.1.2580.001464
noncoding29772T29772-T-1919AY.420.000764
noncoding29772T29772-T-1919AY.920.005458
noncoding29772T29772ATA1919B.1.1600.000593
noncoding29772T29772CTC1818AY.610.001886
noncoding29772T29772-T-1717AY.5.40.004704
noncoding29772T29772-T-1717B.1.177.560.011348
noncoding29772T29772-T-1616AY.60.000658
noncoding29772T29772-T-1616B.1.2210.001137
noncoding29772T29772-T-1515AY.260.000425
noncoding29772T29772-T-1414AY.390.000346
noncoding29772T29772-T-1414AY.610.001467
noncoding29772T29772-T-1414B.1.4040.018229
noncoding29772T29772-T-1313AY.1190.000459
noncoding29772T29772-T-1313AY.75.10.002344
noncoding29772T29772-T-1313B.1.1.2220.002652
noncoding29772T29772-T-1313B.1.1.4200.013078
noncoding29772T29772-T-1313P.1.160.004863
noncoding29772T29772-T-1212B.1.4290.000282
noncoding29772T29772-T-1111AY.1000.000506
noncoding29772T29772-T-1111AY.1180.000689
noncoding29772T29772-T-1111AY.4.20.000239
noncoding29772T29772CTC1111AY.700.002294
noncoding29772T29772-T-1111AY.98.10.000533
noncoding29772T29772-T-1111B.1.1.280.003424
noncoding29772T29772GTG1111B.1.1.70.00001
noncoding29772T29772-T-1111B.1.177.860.002018
noncoding29772T29772-T-1111B.1.360.001605
noncoding29772T29772-T-1111B.1.5260.000259
noncoding29772T29772-T-1010AY.740.001156
noncoding29772T29772-T-1010AY.90.000676
noncoding29772T29772-T-1010B.1.5960.000871
noncoding29772T29772ATA99AY.40.000014
noncoding29772T29772ATA99AY.440.000055
noncoding29772T29772GTG99B.10.000082
noncoding29772T29772-T-99B.1.160.140.019068
noncoding29772T29772-T-99P.1.170.001456
noncoding29772T29772-T-88AY.1170.000676
noncoding29772T29772-T-88AY.450.000973
noncoding29772T29772-T-88AY.670.003714
noncoding29772T29772-T-88AY.750.000448
noncoding29772T29772-T-88AY.850.003417
noncoding29772T29772-T-88B.1.1.3170.003294
noncoding29772T29772-T-88B.1.36.290.004139
noncoding29772T29772-T-88C.37.10.020942
noncoding29772T29772CTC77AY.1000.000322
noncoding29772T29772-T-77AY.340.000679
noncoding29772T29772-T-77AY.460.000729
noncoding29772T29772-T-77AY.46.40.001152
noncoding29772T29772-T-77B.1.1.5190.000278
noncoding29772T29772-T-77B.1.2340.000924
noncoding29772T29772-T-77B.1.36.220.008454
noncoding29772T29772CTC77B.1.5250.000792
noncoding29772T29772-T-77B.1.6210.00062
noncoding29772T29772-T-66AY.230.000418
noncoding29772T29772CTC66AY.400.005786
noncoding29772T29772-T-66AY.980.000474
noncoding29772T29772-T-66B.1.1.2140.000333
noncoding29772T29772CTC66B.1.20.000053
noncoding29772T29772-T-66B.1.36.310.010508
noncoding29772T29772-T-55AY.1140.001156
noncoding29772T29772-T-55AY.1200.000186
noncoding29772T29772-T-55AY.140.00044
noncoding29772T29772-T-55AY.200.000194
noncoding29772T29772-T-55AY.540.000477
noncoding29772T29772-T-55AY.9.20.000184
noncoding29772T29772-T-55B0.000639
noncoding29772T29772CTC55B.1.1770.000066
noncoding29772T29772-T-55B.1.258.170.00052
noncoding29772T29772-T-55B.1.5750.001517
noncoding29772T29772ATA55B.1.5760.004533
noncoding29772T29772ATA55B.1.617.20.000019
noncoding29772T29772-T-55B.1.6190.004355
noncoding29772T29772-T-55P.1.120.00242
noncoding29772T29772-T-55Q.10.000632
noncoding29772T29772CTC44AY.1030.000025
noncoding29772T29772-T-44AY.690.000747
noncoding29772T29772-T-44AY.950.003044
noncoding29772T29772-T-44B.1.1.10.001307
noncoding29772T29772-T-44B.1.1.1700.004988
noncoding29772T29772-T-44B.1.1.2880.007663
noncoding29772T29772-T-44B.1.1.330.001684
noncoding29772T29772-T-44B.1.1.4640.005891
noncoding29772T29772ATA44B.1.1.5190.000159
noncoding29772T29772-T-44B.1.1.5280.019231
noncoding29772T29772-T-44B.1.1040.01476
noncoding29772T29772-T-44B.1.160.330.017699
noncoding29772T29772CTC44B.1.2210.000284
noncoding29772T29772-T-44B.1.2400.000862
noncoding29772T29772ATA44B.1.5250.000453
noncoding29772T29772-T-44B.1.6090.001918
noncoding29772T29772CTC44B.1.6180.016129
noncoding29772T29772-T-44C.10.009569
noncoding29772T29772-T-44D.20.0003
noncoding29772T29772CTC44P.10.000063
noncoding29772T29772-T-44P.1.140.000191
noncoding29772T29772-T-33AY.1090.002219
noncoding29772T29772-T-33AY.120.000948
noncoding29772T29772-T-33AY.3.10.000256
noncoding29772T29772-T-33AY.300.001187
noncoding29772T29772ATA33AY.430.000013
noncoding29772T29772CTC33AY.580.002722
noncoding29772T29772-T-33AY.590.001589
noncoding29772T29772-T-33AY.650.001599
noncoding29772T29772GTG33AY.700.000626
noncoding29772T29772-T-33AY.700.000626
noncoding29772T29772-T-33AY.840.001312
noncoding29772T29772-T-33AY.99.20.000276
noncoding29772T29772CTC33B.10.000027
noncoding29772T29772-T-33B.1.1.2360.02069
noncoding29772T29772-T-33B.1.1.4280.028302
noncoding29772T29772-T-33B.1.1.4320.003797
noncoding29772T29772-T-33B.1.1.460.0131
noncoding29772T29772CTC33B.1.177.670.022901
noncoding29772T29772-T-33B.1.214.20.001799
noncoding29772T29772-T-33B.1.2980.006342
noncoding29772T29772GTG33B.1.3510.000089
noncoding29772T29772-T-33B.1.36.160.004274
noncoding29772T29772-T-33B.1.5820.001472
noncoding29772T29772-T-33B.1.5950.000783
noncoding29772T29772-T-33B.1.6370.000219
noncoding29772T29772-T-33B.1.9.40.018405
noncoding29772T29772-T-33C.360.002732
noncoding29772T29772CTC33C.360.002732
noncoding29772T29772-T-33P.1.150.000697
noncoding29772T29772CTC33P.1.160.001122
noncoding29772T29772-T-22A0.000774
noncoding29772T29772-T-22A.2.50.000998
noncoding29772T29772-T-22AY.1100.000225
noncoding29772T29772ATA22AY.250.000012
noncoding29772T29772CTC22AY.250.000012
noncoding29772T29772CTC22AY.3.10.000171
noncoding29772T29772-T-22AY.330.000134
noncoding29772T29772ATA22AY.330.000134
noncoding29772T29772-T-22AY.350.000466
noncoding29772T29772ATA22AY.390.000049
noncoding29772T29772-T-22AY.400.001929
noncoding29772T29772CTC22AY.430.000009
noncoding29772T29772CTC22AY.440.000012
noncoding29772T29772-T-22AY.46.30.001867
noncoding29772T29772-T-22AY.46.60.000144
noncoding29772T29772-T-22AY.5.30.000675
noncoding29772T29772-T-22AY.560.00321
noncoding29772T29772-T-22AY.620.000871
noncoding29772T29772CTC22AY.90.000135
noncoding29772T29772CTC22AY.9.10.000167
noncoding29772T29772CTC22AY.980.000158
noncoding29772T29772-T-22AZ.20.001642
noncoding29772T29772ATA22B.1.10.000036
noncoding29772T29772CTC22B.1.1.1890.003026
noncoding29772T29772ATA22B.1.1.2220.000408
noncoding29772T29772-T-22B.1.1.250.001137
noncoding29772T29772-T-22B.1.1.2790.002242
noncoding29772T29772-T-22B.1.1.2940.002532
noncoding29772T29772-T-22B.1.1.3060.000877
noncoding29772T29772-T-22B.1.1.3480.001592
noncoding29772T29772-T-22B.1.1.3540.008772
noncoding29772T29772-T-22B.1.1.370.000386
noncoding29772T29772-T-22B.1.1.390.001019
noncoding29772T29772CTC22B.1.1.5190.000079
noncoding29772T29772-T-22B.1.1.5230.003125
noncoding29772T29772-T-22B.1.177.120.000303
noncoding29772T29772-T-22B.1.177.440.001038
noncoding29772T29772-T-22B.1.177.750.002081
noncoding29772T29772-T-22B.1.2060.001631
noncoding29772T29772-T-22B.1.2100.004264
noncoding29772T29772-T-22B.1.2410.001623
noncoding29772T29772-T-22B.1.258.30.00335
noncoding29772T29772CTC22B.1.3510.000059
noncoding29772T29772-T-22B.1.36.80.002
noncoding29772T29772-T-22B.1.4000.000858
noncoding29772T29772-T-22B.1.416.10.003125
noncoding29772T29772-T-22B.1.4270.000101
noncoding29772T29772-T-22B.1.4410.019231
noncoding29772T29772-T-22B.1.4600.035714
noncoding29772T29772ATA22B.1.4970.00063
noncoding29772T29772ATA22B.1.5260.000047
noncoding29772T29772-T-22B.1.564.10.003155
noncoding29772T29772CTC22B.1.617.10.000258
noncoding29772T29772GTG22B.1.617.20.000008
noncoding29772T29772CTC22B.1.6360.013423
noncoding29772T29772-T-22B.310.007463
noncoding29772T29772-T-22B.390.004662
noncoding29772T29772-T-22B.400.000729
noncoding29772T29772-T-22B.60.00182
noncoding29772T29772-T-22C.30.015267
noncoding29772T29772ATA22C.370.000232
noncoding29772T29772-T-22C.380.016129
noncoding29772T29772-T-22P.1.10.000635
noncoding29772T29772-T-22P.1.70.000639
noncoding29772T29772-T-22R.10.00018
noncoding29772T29772-T-11AD.20.000219
noncoding29772T29772-T-11AK.20.045455
noncoding29772T29772-T-11AY.100.00053
noncoding29772T29772ATA11AY.1000.000046
noncoding29772T29772CTC11AY.1020.000027
noncoding29772T29772ATA11AY.1030.000006
noncoding29772T29772-T-11AY.1060.000335
noncoding29772T29772-T-11AY.1110.000183
noncoding29772T29772CTC11AY.1170.000085
noncoding29772T29772CTC11AY.1200.000037
noncoding29772T29772-T-11AY.130.000161
noncoding29772T29772-T-11AY.160.00038
noncoding29772T29772CTC11AY.16.10.00047
noncoding29772T29772CTC11AY.230.00007
noncoding29772T29772-T-11AY.240.000431
noncoding29772T29772ATA11AY.290.000016
noncoding29772T29772CTC11AY.290.000016
noncoding29772T29772-T-11AY.29.10.000221
noncoding29772T29772CTC11AY.340.000097
noncoding29772T29772-T-11AY.360.000148
noncoding29772T29772-T-11AY.39.10.00004
noncoding29772T29772GTG11AY.40.000002
noncoding29772T29772-T-11AY.4.2.10.000149
noncoding29772T29772-T-11AY.4.50.000107
noncoding29772T29772GTG11AY.440.000006
noncoding29772T29772ATA11AY.470.000031
noncoding29772T29772-T-11AY.480.000465
noncoding29772T29772-T-11AY.510.000909
noncoding29772T29772-T-11AY.520.000814
noncoding29772T29772CTC11AY.60.000041
noncoding29772T29772CTC11AY.600.000938
noncoding29772T29772ATA11AY.620.000436
noncoding29772T29772-T-11AY.70.000196
noncoding29772T29772CTC11AY.7.10.000113
noncoding29772T29772ATA11AY.750.000056
noncoding29772T29772CTC11AY.75.10.00018
noncoding29772T29772-T-11AY.800.001129
noncoding29772T29772-T-11AY.810.001992
noncoding29772T29772-T-11AY.870.000833
noncoding29772T29772-T-11AY.9.10.000084
noncoding29772T29772CTC11AY.99.10.001553
noncoding29772T29772CTC11B0.000128
noncoding29772T29772ATA11B.10.000009
noncoding29772T29772CTC11B.1.10.000018
noncoding29772T29772-T-11B.1.1.100.001115
noncoding29772T29772-T-11B.1.1.1610.003534
noncoding29772T29772-T-11B.1.1.1660.033333
noncoding29772T29772-T-11B.1.1.1740.003378
noncoding29772T29772-T-11B.1.1.1970.037037
noncoding29772T29772-T-11B.1.1.2180.007692
noncoding29772T29772-T-11B.1.1.2210.010101
noncoding29772T29772-T-11B.1.1.2290.005747
noncoding29772T29772CTC11B.1.1.270.00565
noncoding29772T29772-T-11B.1.1.2740.005051
noncoding29772T29772-T-11B.1.1.2770.000759
noncoding29772T29772-T-11B.1.1.2860.002899
noncoding29772T29772-T-11B.1.1.3370.003597
noncoding29772T29772-T-11B.1.1.4090.002833
noncoding29772T29772-T-11B.1.1.4130.006897
noncoding29772T29772-T-11B.1.1.500.000679
noncoding29772T29772-T-11B.1.1.5260.003546
noncoding29772T29772-T-11B.1.1.540.003021
noncoding29772T29772-T-11B.1.1.700.000341
noncoding29772T29772-T-11B.1.1.990.02381
noncoding29772T29772-T-11B.1.1100.004525
noncoding29772T29772-T-11B.1.1110.001175
noncoding29772T29772CTC11B.1.1600.000031
noncoding29772T29772-T-11B.1.160.320.004292
noncoding29772T29772ATA11B.1.1770.000013
noncoding29772T29772-T-11B.1.177.110.001698
noncoding29772T29772CTC11B.1.177.210.000076
noncoding29772T29772-T-11B.1.177.320.00135
noncoding29772T29772-T-11B.1.177.330.001645
noncoding29772T29772-T-11B.1.177.40.000211
noncoding29772T29772-T-11B.1.177.420.000894
noncoding29772T29772-T-11B.1.177.540.000606
noncoding29772T29772-T-11B.1.177.570.000281
noncoding29772T29772-T-11B.1.177.60.000977
noncoding29772T29772CTC11B.1.177.620.001192
noncoding29772T29772ATA11B.1.177.620.001192
noncoding29772T29772ATA11B.1.177.630.002703
noncoding29772T29772CTC11B.1.177.650.000665
noncoding29772T29772-T-11B.1.177.810.000189
noncoding29772T29772CTC11B.1.177.860.000183
noncoding29772T29772GTG11B.1.177.860.000183
noncoding29772T29772GTG11B.1.177.90.001332
noncoding29772T29772-T-11B.1.1920.009259
noncoding29772T29772ATA11B.1.2210.000071
noncoding29772T29772CTC11B.1.221.20.004016
noncoding29772T29772-T-11B.1.2220.001692
noncoding29772T29772-T-11B.1.258.240.010753
noncoding29772T29772-T-11B.1.2600.003344
noncoding29772T29772ATA11B.1.2790.000514
noncoding29772T29772-T-11B.1.2810.021739
noncoding29772T29772-T-11B.1.3290.000608
noncoding29772T29772ATA11B.1.3510.00003
noncoding29772T29772-T-11B.1.351.20.000303
noncoding29772T29772-T-11B.1.351.30.000876
noncoding29772T29772-T-11B.1.351.50.0006
noncoding29772T29772ATA11B.1.360.000146
noncoding29772T29772ATA11B.1.36.10.00114
noncoding29772T29772-T-11B.1.36.190.009259
noncoding29772T29772-T-11B.1.3620.001541
noncoding29772T29772-T-11B.1.3670.000792
noncoding29772T29772GTG11B.1.4000.000429
noncoding29772T29772CTC11B.1.4110.003704
noncoding29772T29772CTC11B.1.4160.001269
noncoding29772T29772-T-11B.1.4160.001269
noncoding29772T29772ATA11B.1.4270.00005
noncoding29772T29772GTG11B.1.4290.000024
noncoding29772T29772-T-11B.1.4620.007246
noncoding29772T29772-T-11B.1.4700.001404
noncoding29772T29772-T-11B.1.5060.02381
noncoding29772T29772-T-11B.1.5090.000866
noncoding29772T29772ATA11B.1.5610.000397
noncoding29772T29772-T-11B.1.5650.00081
noncoding29772T29772-T-11B.1.5760.000907
noncoding29772T29772GTG11B.1.5950.000261
noncoding29772T29772-T-11B.1.595.10.005848
noncoding29772T29772ATA11B.1.5960.000087
noncoding29772T29772CTC11B.1.5990.00365
noncoding29772T29772-T-11B.1.617.10.000129
noncoding29772T29772-T-11B.1.617.30.002985
noncoding29772T29772CTC11B.1.6190.000871
noncoding29772T29772-T-11B.1.619.10.000641
noncoding29772T29772-T-11B.1.6300.005236
noncoding29772T29772-T-11B.1.9.50.005682
noncoding29772T29772-T-11B.550.00295
noncoding29772T29772-T-11C.350.000774
noncoding29772T29772GTG11C.360.000911
noncoding29772T29772CTC11C.36.30.000567
noncoding29772T29772-T-11C.36.30.000567
noncoding29772T29772CTC11D.20.000075
noncoding29772T29772-T-11K.30.006173
noncoding29772T29772-T-11L.30.003546
noncoding29772T29772-T-11N.40.004255
noncoding29772T29772-T-11N.50.001767
noncoding29772T29772CTC11N.60.007092
noncoding29772T29772ATA11P.1.10.000318
noncoding29772T29772CTC11P.1.10.000318
noncoding29772T29772-T-11P.1.100.000269
noncoding29772T29772-T-11P.20.000187
noncoding29772T29772-T-11P.60.003145
noncoding29772T29772CTC11Q.10.000126
noncoding29772T29772-T-11Q.20.000613
noncoding29772T29772-T-11W.40.001351