CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 29762 | C29762- | noncoding | C | - | 18793 | 18793 | 1 | 29762-29762 | |
noncoding | 29762 | C29762T | noncoding | C | T | 8569 | 8569 | 1 | 29762-29762 | |
noncoding | 29762 | C29762G | noncoding | C | G | 194 | 194 | 1 | 29762-29762 | |
noncoding | 29762 | C29762A | noncoding | C | A | 63 | 63 | 1 | 29762-29762 | |
noncoding | 29762 | C29762W | noncoding | C | W | 1 | 1 | 1 | 29762-29762 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 29762 | C29762- | C | - | 18793 | 18793 | All | 0.003594 |
noncoding | 29762 | C29762T | C | T | 8569 | 8569 | All | 0.001639 |
noncoding | 29762 | C29762- | C | - | 3716 | 3716 | B.1.525 | 0.420505 |
noncoding | 29762 | C29762T | C | T | 2571 | 2571 | B.1.1.7 | 0.002302 |
noncoding | 29762 | C29762- | C | - | 2383 | 2383 | AY.4 | 0.003709 |
noncoding | 29762 | C29762- | C | - | 1996 | 1996 | B.1.1.7 | 0.001787 |
noncoding | 29762 | C29762- | C | - | 1763 | 1763 | B.1.1.311 | 0.631447 |
noncoding | 29762 | C29762- | C | - | 1165 | 1165 | AY.26 | 0.032981 |
noncoding | 29762 | C29762- | C | - | 828 | 828 | AY.38 | 0.41338 |
noncoding | 29762 | C29762T | C | T | 622 | 622 | P.1.14 | 0.029732 |
noncoding | 29762 | C29762T | C | T | 596 | 596 | B.1.258.16 | 0.97545 |
noncoding | 29762 | C29762T | C | T | 594 | 594 | B.1.177.60 | 0.129751 |
noncoding | 29762 | C29762- | C | - | 527 | 527 | P.1 | 0.008302 |
noncoding | 29762 | C29762- | C | - | 520 | 520 | B.1.617.2 | 0.001958 |
noncoding | 29762 | C29762- | C | - | 463 | 463 | AY.25 | 0.002785 |
noncoding | 29762 | C29762- | C | - | 369 | 369 | B.1.2 | 0.003249 |
noncoding | 29762 | C29762T | C | T | 324 | 324 | AY.114 | 0.074879 |
noncoding | 29762 | C29762- | C | - | 294 | 294 | B.1 | 0.002693 |
noncoding | 29762 | C29762- | C | - | 274 | 274 | AY.5 | 0.005658 |
noncoding | 29762 | C29762- | C | - | 264 | 264 | AY.103 | 0.001639 |
noncoding | 29762 | C29762T | C | T | 244 | 244 | B.1.177.79 | 0.571429 |
noncoding | 29762 | C29762T | C | T | 237 | 237 | AY.56 | 0.380417 |
noncoding | 29762 | C29762T | C | T | 234 | 234 | U.3 | 0.903475 |
noncoding | 29762 | C29762T | C | T | 228 | 228 | AY.5 | 0.004708 |
noncoding | 29762 | C29762T | C | T | 197 | 197 | B.1 | 0.001804 |
noncoding | 29762 | C29762G | C | G | 194 | 194 | All | 0.000037 |
noncoding | 29762 | C29762T | C | T | 171 | 171 | B.1.2 | 0.001506 |
noncoding | 29762 | C29762T | C | T | 162 | 162 | B.1.177 | 0.002133 |
noncoding | 29762 | C29762T | C | T | 161 | 161 | B.1.573 | 0.981707 |
noncoding | 29762 | C29762T | C | T | 151 | 151 | AY.4.2 | 0.003275 |
noncoding | 29762 | C29762- | C | - | 147 | 147 | AY.43 | 0.000651 |
noncoding | 29762 | C29762T | C | T | 134 | 134 | AY.4 | 0.000209 |
noncoding | 29762 | C29762- | C | - | 133 | 133 | B.1.351 | 0.003954 |
noncoding | 29762 | C29762- | C | - | 132 | 132 | B.1.1 | 0.002395 |
noncoding | 29762 | C29762T | C | T | 132 | 132 | B.1.258 | 0.008784 |
noncoding | 29762 | C29762- | C | - | 105 | 105 | AY.47 | 0.003266 |
noncoding | 29762 | C29762- | C | - | 103 | 103 | B.1.177.81 | 0.0195 |
noncoding | 29762 | C29762- | C | - | 102 | 102 | C.37 | 0.011838 |
noncoding | 29762 | C29762- | C | - | 101 | 101 | B.1.221 | 0.007174 |
noncoding | 29762 | C29762T | C | T | 100 | 100 | B.1.526 | 0.00235 |
noncoding | 29762 | C29762- | C | - | 99 | 99 | B.1.243 | 0.006889 |
noncoding | 29762 | C29762- | C | - | 96 | 96 | AY.73 | 0.063872 |
noncoding | 29762 | C29762- | C | - | 93 | 93 | AZ.5 | 0.326316 |
noncoding | 29762 | C29762- | C | - | 93 | 93 | B.1.177 | 0.001225 |
noncoding | 29762 | C29762T | C | T | 91 | 91 | B.1.1 | 0.001651 |
noncoding | 29762 | C29762- | C | - | 88 | 88 | B.1.1.222 | 0.017952 |
noncoding | 29762 | C29762- | C | - | 85 | 85 | AY.44 | 0.000517 |
noncoding | 29762 | C29762- | C | - | 82 | 82 | B.1.160 | 0.002557 |
noncoding | 29762 | C29762T | C | T | 81 | 81 | AY.23 | 0.00565 |
noncoding | 29762 | C29762- | C | - | 78 | 78 | B.1.1.50 | 0.052953 |
noncoding | 29762 | C29762- | C | - | 77 | 77 | AY.3 | 0.000766 |
noncoding | 29762 | C29762- | C | - | 77 | 77 | B.1.1.519 | 0.003058 |
noncoding | 29762 | C29762T | C | T | 75 | 75 | B.1.617.2 | 0.000282 |
noncoding | 29762 | C29762T | C | T | 74 | 74 | P.1 | 0.001166 |
noncoding | 29762 | C29762G | C | G | 73 | 73 | B.1.429 | 0.001718 |
noncoding | 29762 | C29762- | C | - | 72 | 72 | B.1.603 | 0.765957 |
noncoding | 29762 | C29762- | C | - | 71 | 71 | B.1.177.4 | 0.014985 |
noncoding | 29762 | C29762- | C | - | 68 | 68 | B.1.258 | 0.004525 |
noncoding | 29762 | C29762- | C | - | 68 | 68 | B.1.526 | 0.001598 |
noncoding | 29762 | C29762T | C | T | 66 | 66 | AY.103 | 0.00041 |
noncoding | 29762 | C29762- | C | - | 65 | 65 | AY.99.2 | 0.00599 |
noncoding | 29762 | C29762T | C | T | 64 | 64 | B.1.466.2 | 0.025039 |
noncoding | 29762 | C29762A | C | A | 63 | 63 | All | 0.000012 |
noncoding | 29762 | C29762- | C | - | 62 | 62 | B.1.429 | 0.001459 |
noncoding | 29762 | C29762- | C | - | 60 | 60 | AY.111 | 0.010989 |
noncoding | 29762 | C29762T | C | T | 60 | 60 | B.1.221 | 0.004262 |
noncoding | 29762 | C29762- | C | - | 60 | 60 | C.16 | 0.063627 |
noncoding | 29762 | C29762T | C | T | 55 | 55 | B.1.177.87 | 0.040029 |
noncoding | 29762 | C29762- | C | - | 52 | 52 | B.1.36.18 | 0.021849 |
noncoding | 29762 | C29762- | C | - | 50 | 50 | AY.39 | 0.001236 |
noncoding | 29762 | C29762- | C | - | 49 | 49 | AY.120 | 0.001822 |
noncoding | 29762 | C29762T | C | T | 48 | 48 | B.1.1.231 | 0.148607 |
noncoding | 29762 | C29762T | C | T | 47 | 47 | AY.25 | 0.000283 |
noncoding | 29762 | C29762- | C | - | 46 | 46 | B.1.427 | 0.002323 |
noncoding | 29762 | C29762T | C | T | 46 | 46 | B.1.596 | 0.004008 |
noncoding | 29762 | C29762- | C | - | 43 | 43 | B.1.621 | 0.003806 |
noncoding | 29762 | C29762- | C | - | 39 | 39 | B.1.1.351 | 0.108939 |
noncoding | 29762 | C29762T | C | T | 38 | 38 | B.1.351 | 0.00113 |
noncoding | 29762 | C29762T | C | T | 37 | 37 | B.1.621 | 0.003275 |
noncoding | 29762 | C29762- | C | - | 36 | 36 | AY.29 | 0.000568 |
noncoding | 29762 | C29762- | C | - | 35 | 35 | AY.102 | 0.000928 |
noncoding | 29762 | C29762T | C | T | 32 | 32 | B.1.160 | 0.000998 |
noncoding | 29762 | C29762G | C | G | 32 | 32 | B.1.526 | 0.000752 |
noncoding | 29762 | C29762T | C | T | 31 | 31 | B.1.1.519 | 0.001231 |
noncoding | 29762 | C29762T | C | T | 29 | 29 | AY.46.6 | 0.002094 |
noncoding | 29762 | C29762T | C | T | 29 | 29 | B.1.637 | 0.002119 |
noncoding | 29762 | C29762- | C | - | 28 | 28 | B.1.595 | 0.007307 |
noncoding | 29762 | C29762- | C | - | 27 | 27 | B.1.346 | 0.035387 |
noncoding | 29762 | C29762T | C | T | 27 | 27 | B.1.429 | 0.000635 |
noncoding | 29762 | C29762T | C | T | 26 | 26 | AY.26 | 0.000736 |
noncoding | 29762 | C29762T | C | T | 26 | 26 | AY.44 | 0.000158 |
noncoding | 29762 | C29762T | C | T | 26 | 26 | AY.47 | 0.000809 |
noncoding | 29762 | C29762- | C | - | 26 | 26 | B.1.234 | 0.003431 |
noncoding | 29762 | C29762- | C | - | 25 | 25 | B.1.1.28 | 0.007781 |
noncoding | 29762 | C29762T | C | T | 25 | 25 | B.1.36 | 0.003648 |
noncoding | 29762 | C29762T | C | T | 22 | 22 | AY.43 | 0.000097 |
noncoding | 29762 | C29762- | C | - | 22 | 22 | AY.61 | 0.002305 |
noncoding | 29762 | C29762- | C | - | 22 | 22 | B.1.1.368 | 0.067901 |
noncoding | 29762 | C29762- | C | - | 22 | 22 | B.1.160.26 | 0.053269 |
noncoding | 29762 | C29762- | C | - | 22 | 22 | B.1.240 | 0.004742 |
noncoding | 29762 | C29762- | C | - | 22 | 22 | B.1.305 | 0.047312 |
noncoding | 29762 | C29762- | C | - | 20 | 20 | AY.20 | 0.000777 |
noncoding | 29762 | C29762- | C | - | 20 | 20 | AY.42 | 0.000805 |
noncoding | 29762 | C29762- | C | - | 20 | 20 | B.1.575 | 0.006068 |
noncoding | 29762 | C29762T | C | T | 20 | 20 | B.1.595 | 0.005219 |
noncoding | 29762 | C29762- | C | - | 20 | 20 | P.1.14 | 0.000956 |
noncoding | 29762 | C29762T | C | T | 19 | 19 | AY.5.4 | 0.005257 |
noncoding | 29762 | C29762- | C | - | 19 | 19 | AY.92 | 0.005458 |
noncoding | 29762 | C29762T | C | T | 19 | 19 | D.2 | 0.001426 |
noncoding | 29762 | C29762- | C | - | 18 | 18 | B.1.1.172 | 0.327273 |
noncoding | 29762 | C29762- | C | - | 18 | 18 | B.1.177.9 | 0.023968 |
noncoding | 29762 | C29762- | C | - | 18 | 18 | B.1.206 | 0.014682 |
noncoding | 29762 | C29762- | C | - | 18 | 18 | B.1.36.19 | 0.166667 |
noncoding | 29762 | C29762T | C | T | 17 | 17 | AY.20 | 0.000661 |
noncoding | 29762 | C29762- | C | - | 17 | 17 | AY.5.4 | 0.004704 |
noncoding | 29762 | C29762- | C | - | 17 | 17 | AY.6 | 0.000699 |
noncoding | 29762 | C29762- | C | - | 17 | 17 | B.1.637 | 0.001242 |
noncoding | 29762 | C29762- | C | - | 16 | 16 | AY.100 | 0.000736 |
noncoding | 29762 | C29762- | C | - | 16 | 16 | AY.119 | 0.000565 |
noncoding | 29762 | C29762A | C | A | 16 | 16 | AY.44 | 0.000097 |
noncoding | 29762 | C29762- | C | - | 16 | 16 | AY.46.5 | 0.003175 |
noncoding | 29762 | C29762T | C | T | 16 | 16 | B.1.1.284 | 0.001718 |
noncoding | 29762 | C29762- | C | - | 16 | 16 | B.1.1.434 | 0.005577 |
noncoding | 29762 | C29762- | C | - | 16 | 16 | B.1.404 | 0.020833 |
noncoding | 29762 | C29762T | C | T | 16 | 16 | P.2 | 0.002986 |
noncoding | 29762 | C29762- | C | - | 15 | 15 | AY.4.2 | 0.000325 |
noncoding | 29762 | C29762- | C | - | 15 | 15 | AY.75.1 | 0.002705 |
noncoding | 29762 | C29762- | C | - | 15 | 15 | B.1.1.214 | 0.000832 |
noncoding | 29762 | C29762- | C | - | 15 | 15 | B.1.139 | 0.010997 |
noncoding | 29762 | C29762T | C | T | 15 | 15 | B.1.240 | 0.003233 |
noncoding | 29762 | C29762T | C | T | 15 | 15 | B.1.351.2 | 0.004539 |
noncoding | 29762 | C29762- | C | - | 15 | 15 | B.1.36 | 0.002189 |
noncoding | 29762 | C29762G | C | G | 15 | 15 | P.1 | 0.000236 |
noncoding | 29762 | C29762- | C | - | 14 | 14 | AY.118 | 0.000877 |
noncoding | 29762 | C29762T | C | T | 14 | 14 | AY.3 | 0.000139 |
noncoding | 29762 | C29762- | C | - | 14 | 14 | AY.9.2 | 0.000514 |
noncoding | 29762 | C29762- | C | - | 14 | 14 | AZ.2 | 0.011494 |
noncoding | 29762 | C29762G | C | G | 14 | 14 | B.1 | 0.000128 |
noncoding | 29762 | C29762- | C | - | 14 | 14 | B.1.1.33 | 0.005892 |
noncoding | 29762 | C29762- | C | - | 14 | 14 | B.1.581 | 0.132075 |
noncoding | 29762 | C29762- | C | - | 14 | 14 | B.1.596 | 0.00122 |
noncoding | 29762 | C29762- | C | - | 14 | 14 | C.36.3 | 0.007941 |
noncoding | 29762 | C29762- | C | - | 13 | 13 | AY.45 | 0.001582 |
noncoding | 29762 | C29762- | C | - | 13 | 13 | B.1.1.416 | 0.011765 |
noncoding | 29762 | C29762- | C | - | 13 | 13 | B.1.1.420 | 0.013078 |
noncoding | 29762 | C29762T | C | T | 13 | 13 | B.1.243 | 0.000905 |
noncoding | 29762 | C29762- | C | - | 12 | 12 | AY.46.6 | 0.000866 |
noncoding | 29762 | C29762T | C | T | 12 | 12 | AY.63 | 0.004642 |
noncoding | 29762 | C29762- | C | - | 12 | 12 | AY.75 | 0.000672 |
noncoding | 29762 | C29762- | C | - | 12 | 12 | AY.9 | 0.000811 |
noncoding | 29762 | C29762- | C | - | 12 | 12 | B.1.177.6 | 0.011719 |
noncoding | 29762 | C29762- | C | - | 12 | 12 | B.1.177.75 | 0.012487 |
noncoding | 29762 | C29762- | C | - | 11 | 11 | AY.117 | 0.00093 |
noncoding | 29762 | C29762- | C | - | 11 | 11 | B.1.1.265 | 0.0347 |
noncoding | 29762 | C29762- | C | - | 11 | 11 | B.1.36.29 | 0.005691 |
noncoding | 29762 | C29762T | C | T | 11 | 11 | B.1.380 | 0.072848 |
noncoding | 29762 | C29762T | C | T | 10 | 10 | AY.118 | 0.000626 |
noncoding | 29762 | C29762- | C | - | 10 | 10 | AY.46 | 0.001041 |
noncoding | 29762 | C29762- | C | - | 10 | 10 | AY.74 | 0.001156 |
noncoding | 29762 | C29762- | C | - | 10 | 10 | B.1.1.317 | 0.004117 |
noncoding | 29762 | C29762- | C | - | 10 | 10 | B.1.1.318 | 0.003018 |
noncoding | 29762 | C29762T | C | T | 10 | 10 | B.1.177.17 | 0.00821 |
noncoding | 29762 | C29762T | C | T | 10 | 10 | B.1.177.7 | 0.001649 |
noncoding | 29762 | C29762- | C | - | 10 | 10 | B.1.214.2 | 0.005995 |
noncoding | 29762 | C29762- | C | - | 10 | 10 | D.2 | 0.00075 |
noncoding | 29762 | C29762T | C | T | 9 | 9 | AY.102 | 0.000239 |
noncoding | 29762 | C29762- | C | - | 9 | 9 | AY.14 | 0.000792 |
noncoding | 29762 | C29762- | C | - | 9 | 9 | AY.54 | 0.000858 |
noncoding | 29762 | C29762- | C | - | 9 | 9 | B.1.160.14 | 0.019068 |
noncoding | 29762 | C29762T | C | T | 9 | 9 | B.1.177.58 | 0.011984 |
noncoding | 29762 | C29762- | C | - | 9 | 9 | B.1.177.86 | 0.001651 |
noncoding | 29762 | C29762T | C | T | 9 | 9 | B.1.234 | 0.001187 |
noncoding | 29762 | C29762- | C | - | 9 | 9 | B.1.258.3 | 0.015075 |
noncoding | 29762 | C29762- | C | - | 9 | 9 | B.1.311 | 0.002471 |
noncoding | 29762 | C29762- | C | - | 9 | 9 | B.1.36.1 | 0.010262 |
noncoding | 29762 | C29762- | C | - | 9 | 9 | B.1.599 | 0.032847 |
noncoding | 29762 | C29762- | C | - | 8 | 8 | A.1 | 0.002255 |
noncoding | 29762 | C29762- | C | - | 8 | 8 | AY.23 | 0.000558 |
noncoding | 29762 | C29762- | C | - | 8 | 8 | AY.30 | 0.003166 |
noncoding | 29762 | C29762- | C | - | 8 | 8 | AY.46.4 | 0.001316 |
noncoding | 29762 | C29762- | C | - | 8 | 8 | AY.98.1 | 0.000387 |
noncoding | 29762 | C29762A | C | A | 8 | 8 | B.1 | 0.000073 |
noncoding | 29762 | C29762- | C | - | 8 | 8 | B.1.1.1 | 0.002614 |
noncoding | 29762 | C29762T | C | T | 8 | 8 | B.1.1.291 | 0.005939 |
noncoding | 29762 | C29762- | C | - | 8 | 8 | B.1.1.303 | 0.022099 |
noncoding | 29762 | C29762T | C | T | 8 | 8 | B.1.1.416 | 0.00724 |
noncoding | 29762 | C29762T | C | T | 8 | 8 | B.1.177.65 | 0.005323 |
noncoding | 29762 | C29762- | C | - | 8 | 8 | B.1.258.17 | 0.000832 |
noncoding | 29762 | C29762T | C | T | 8 | 8 | B.1.525 | 0.000905 |
noncoding | 29762 | C29762- | C | - | 8 | 8 | B.1.623 | 0.004292 |
noncoding | 29762 | C29762T | C | T | 7 | 7 | AY.100 | 0.000322 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | AY.114 | 0.001618 |
noncoding | 29762 | C29762T | C | T | 7 | 7 | AY.117 | 0.000592 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | AY.34 | 0.000679 |
noncoding | 29762 | C29762T | C | T | 7 | 7 | AY.42 | 0.000282 |
noncoding | 29762 | C29762T | C | T | 7 | 7 | AY.46.4 | 0.001152 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | AY.7 | 0.001372 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | AY.85 | 0.00299 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | B | 0.000895 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | B.1.1.37 | 0.00135 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | B.1.1.526 | 0.024823 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | B.1.110.3 | 0.005029 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | B.1.177.60 | 0.001529 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | B.1.177.7 | 0.001154 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | B.1.177.82 | 0.003341 |
noncoding | 29762 | C29762T | C | T | 7 | 7 | B.1.258.17 | 0.000728 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | B.1.36.22 | 0.008454 |
noncoding | 29762 | C29762T | C | T | 7 | 7 | B.1.427 | 0.000353 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | B.1.582 | 0.003435 |
noncoding | 29762 | C29762- | C | - | 7 | 7 | Q.3 | 0.001015 |
noncoding | 29762 | C29762T | C | T | 6 | 6 | A.2.5 | 0.002994 |
noncoding | 29762 | C29762T | C | T | 6 | 6 | AY.39 | 0.000148 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | AY.62 | 0.002614 |
noncoding | 29762 | C29762T | C | T | 6 | 6 | B.1.1.214 | 0.000333 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | B.1.1.231 | 0.018576 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | B.1.1.316 | 0.00555 |
noncoding | 29762 | C29762T | C | T | 6 | 6 | B.1.1.434 | 0.002091 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | B.1.1.446 | 0.461538 |
noncoding | 29762 | C29762A | C | A | 6 | 6 | B.1.1.7 | 0.000005 |
noncoding | 29762 | C29762T | C | T | 6 | 6 | B.1.177.8 | 0.004515 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | B.1.241 | 0.00487 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | B.1.36.31 | 0.010508 |
noncoding | 29762 | C29762T | C | T | 6 | 6 | B.1.582 | 0.002944 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | B.1.588 | 0.00546 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | B.1.609 | 0.002876 |
noncoding | 29762 | C29762T | C | T | 6 | 6 | B.1.617.1 | 0.000774 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | B.1.617.1 | 0.000774 |
noncoding | 29762 | C29762T | C | T | 6 | 6 | C.36 | 0.005464 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | P.1.11 | 0.061224 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | P.1.16 | 0.002245 |
noncoding | 29762 | C29762- | C | - | 6 | 6 | R.1 | 0.00054 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | A | 0.001935 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | A.2.5 | 0.002495 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | AY.113 | 0.000712 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | AY.35 | 0.001165 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | AY.59 | 0.002648 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | AY.98 | 0.000395 |
noncoding | 29762 | C29762T | C | T | 5 | 5 | AY.98 | 0.000395 |
noncoding | 29762 | C29762T | C | T | 5 | 5 | B | 0.000639 |
noncoding | 29762 | C29762G | C | G | 5 | 5 | B.1.1.222 | 0.00102 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | B.1.1.306 | 0.002192 |
noncoding | 29762 | C29762G | C | G | 5 | 5 | B.1.1.7 | 0.000004 |
noncoding | 29762 | C29762G | C | G | 5 | 5 | B.1.139 | 0.003666 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | B.1.160.33 | 0.022124 |
noncoding | 29762 | C29762T | C | T | 5 | 5 | B.1.177.35 | 0.003455 |
noncoding | 29762 | C29762T | C | T | 5 | 5 | B.1.399 | 0.009671 |
noncoding | 29762 | C29762T | C | T | 5 | 5 | B.1.576 | 0.004533 |
noncoding | 29762 | C29762T | C | T | 5 | 5 | C.37 | 0.00058 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | P.1.15 | 0.001162 |
noncoding | 29762 | C29762- | C | - | 5 | 5 | P.1.17 | 0.000809 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | AY.10 | 0.00212 |
noncoding | 29762 | C29762G | C | G | 4 | 4 | AY.100 | 0.000184 |
noncoding | 29762 | C29762G | C | G | 4 | 4 | AY.103 | 0.000025 |
noncoding | 29762 | C29762A | C | A | 4 | 4 | AY.103 | 0.000025 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | AY.12 | 0.001264 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | AY.13 | 0.000644 |
noncoding | 29762 | C29762G | C | G | 4 | 4 | AY.25 | 0.000024 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | AY.33 | 0.000267 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | AY.48 | 0.00186 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | AY.53 | 0.00115 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | AY.65 | 0.002132 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | AY.69 | 0.000747 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | AY.70 | 0.000834 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | AY.99.2 | 0.000369 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.1.129 | 0.036697 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.1.232 | 0.00726 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.1.298 | 0.003448 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | B.1.1.306 | 0.001754 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | B.1.1.312 | 0.007648 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | B.1.1.33 | 0.001684 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | B.1.1.389 | 0.024242 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.1.46 | 0.017467 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.1.464 | 0.005891 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.104 | 0.01476 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.177.17 | 0.003284 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.177.20 | 0.00607 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.177.32 | 0.005398 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | B.1.177.50 | 0.018779 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.177.76 | 0.009975 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | B.1.222 | 0.006768 |
noncoding | 29762 | C29762G | C | G | 4 | 4 | B.1.258 | 0.000266 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | B.1.258.11 | 0.001585 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.36.39 | 0.008869 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.400 | 0.001716 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.416.1 | 0.00625 |
noncoding | 29762 | C29762A | C | A | 4 | 4 | B.1.525 | 0.000453 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | B.1.609 | 0.001918 |
noncoding | 29762 | C29762- | C | - | 4 | 4 | B.1.620 | 0.003784 |
noncoding | 29762 | C29762G | C | G | 4 | 4 | D.2 | 0.0003 |
noncoding | 29762 | C29762T | C | T | 4 | 4 | Q.1 | 0.000505 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | AU.1 | 0.003797 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | AY.105 | 0.001929 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | AY.109 | 0.002219 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | AY.119 | 0.000106 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | AY.13 | 0.000483 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | AY.24 | 0.001293 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | AY.3.1 | 0.000256 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | AY.33 | 0.0002 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | AY.36 | 0.000445 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | AY.36 | 0.000445 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | AY.39.2 | 0.004622 |
noncoding | 29762 | C29762G | C | G | 3 | 3 | AY.4 | 0.000005 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | AY.40 | 0.002893 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | AY.45 | 0.000365 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | AY.6 | 0.000123 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | AY.84 | 0.001312 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | AY.89 | 0.014706 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.1.139 | 0.068182 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.1.170 | 0.003741 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.1.192 | 0.006928 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | B.1.1.207 | 0.003546 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | B.1.1.222 | 0.000612 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.1.236 | 0.02069 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | B.1.1.28 | 0.000934 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.1.284 | 0.000322 |
noncoding | 29762 | C29762G | C | G | 3 | 3 | B.1.1.306 | 0.001315 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | B.1.1.37 | 0.000579 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.1.375 | 0.035714 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | B.1.1.397 | 0.006757 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.1.428 | 0.028302 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.1.432 | 0.003797 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.1.528 | 0.014423 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | B.1.128 | 0.001906 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.145 | 0.157895 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.177.21 | 0.000229 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | B.1.177.32 | 0.004049 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.177.57 | 0.000843 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.177.77 | 0.002179 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.210 | 0.006397 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.258.16 | 0.00491 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.36.16 | 0.004274 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | B.1.36.29 | 0.001552 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | B.1.36.8 | 0.003 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.416 | 0.003807 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.44 | 0.025 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.590 | 0.013636 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.9.4 | 0.018405 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | B.1.91 | 0.006224 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | N.5 | 0.0053 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | P.1.1 | 0.000953 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | P.1.13 | 0.002695 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | P.1.15 | 0.000697 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | P.2 | 0.00056 |
noncoding | 29762 | C29762- | C | - | 3 | 3 | Q.1 | 0.000379 |
noncoding | 29762 | C29762T | C | T | 3 | 3 | W.1 | 0.026087 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | A.2.2 | 0.003378 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | A.27 | 0.003311 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | AD.2 | 0.000438 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.106 | 0.00067 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.110 | 0.000225 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.116 | 0.000574 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | AY.120 | 0.000074 |
noncoding | 29762 | C29762A | C | A | 2 | 2 | AY.120.1 | 0.000642 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | AY.120.1 | 0.000642 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.16 | 0.000759 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.19 | 0.002281 |
noncoding | 29762 | C29762A | C | A | 2 | 2 | AY.23 | 0.000139 |
noncoding | 29762 | C29762A | C | A | 2 | 2 | AY.27 | 0.000129 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.39.1 | 0.000079 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.4.5 | 0.000215 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | AY.46 | 0.000208 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.46.3 | 0.001867 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.5.3 | 0.000675 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.52 | 0.001629 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.56 | 0.00321 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | AY.61 | 0.00021 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | AY.62 | 0.000871 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.67 | 0.000929 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | AY.7.1 | 0.000225 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | AY.74 | 0.000231 |
noncoding | 29762 | C29762G | C | G | 2 | 2 | AY.75.1 | 0.000361 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.88 | 0.001768 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.9.1 | 0.000167 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AY.95 | 0.001522 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | AZ.4 | 0.006711 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.1.157 | 0.001826 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.174 | 0.006757 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.1.25 | 0.001137 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.25 | 0.001137 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.1.263 | 0.003115 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.274 | 0.010101 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.279 | 0.002242 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.294 | 0.002532 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.1.302 | 0.004149 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.348 | 0.001592 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.1.348 | 0.001592 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.354 | 0.008772 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.372 | 0.001377 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.385 | 0.008929 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.39 | 0.001019 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.1.39 | 0.001019 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.409 | 0.005666 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.417 | 0.005405 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.1.522 | 0.034483 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.1.63 | 0.000772 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.1.63 | 0.000772 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.177.10 | 0.001756 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.177.15 | 0.001262 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.177.4 | 0.000422 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.177.57 | 0.000562 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.177.65 | 0.001331 |
noncoding | 29762 | C29762G | C | G | 2 | 2 | B.1.2 | 0.000018 |
noncoding | 29762 | C29762A | C | A | 2 | 2 | B.1.2 | 0.000018 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.298 | 0.004228 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.340 | 0.008584 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.351.2 | 0.000605 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.351.3 | 0.001753 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.351.5 | 0.001199 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.36.17 | 0.000988 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.389 | 0.002004 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.396 | 0.001411 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.408 | 0.00738 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.422 | 0.001625 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.436 | 0.002058 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.438.1 | 0.000215 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.441 | 0.019231 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.456 | 0.006536 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.462 | 0.014493 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.521 | 0.00995 |
noncoding | 29762 | C29762G | C | G | 2 | 2 | B.1.525 | 0.000226 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.527 | 0.007407 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.540 | 0.019417 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.561 | 0.000794 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.564.1 | 0.003155 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.1.565 | 0.001621 |
noncoding | 29762 | C29762G | C | G | 2 | 2 | B.1.617.2 | 0.000008 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | B.1.621.1 | 0.001012 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.31 | 0.007463 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.39 | 0.004662 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.4 | 0.004415 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | B.40 | 0.000729 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | C.14 | 0.008658 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | C.3 | 0.015267 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | C.35 | 0.001548 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | C.35 | 0.001548 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | C.38 | 0.016129 |
noncoding | 29762 | C29762A | C | A | 2 | 2 | P.1 | 0.000032 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | P.1.12 | 0.000968 |
noncoding | 29762 | C29762- | C | - | 2 | 2 | P.1.6 | 0.003891 |
noncoding | 29762 | C29762T | C | T | 2 | 2 | R.1 | 0.00018 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | A.1 | 0.000282 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | A.2 | 0.000662 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | A.23.1 | 0.000704 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | A.28 | 0.002646 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | A.9 | 0.045455 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AD.2 | 0.000219 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | AD.2 | 0.000219 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AK.2 | 0.045455 |
noncoding | 29762 | C29762W | C | W | 1 | 1 | All | 0 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.10 | 0.00053 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.101 | 0.00049 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | AY.102 | 0.000027 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.108 | 0.001103 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.113 | 0.000142 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.116 | 0.000287 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | AY.117 | 0.000085 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.120.1 | 0.000321 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.16 | 0.00038 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.16.1 | 0.00047 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.2 | 0.000356 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | AY.24 | 0.000431 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.27 | 0.000065 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.27 | 0.000065 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.28 | 0.00189 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | AY.29 | 0.000016 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.29 | 0.000016 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.29.1 | 0.000221 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | AY.3 | 0.00001 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.30 | 0.000396 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.32 | 0.000532 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | AY.4 | 0.000002 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | AY.4.2 | 0.000022 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.4.2.1 | 0.000149 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | AY.4.3 | 0.000842 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.4.4 | 0.000409 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.4.5 | 0.000107 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.40 | 0.000964 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.41 | 0.000294 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.46.2 | 0.000635 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.46.5 | 0.000198 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.5.3 | 0.000337 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.51 | 0.000909 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.52 | 0.000814 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.53 | 0.000288 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.55 | 0.000917 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.55 | 0.000917 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.58 | 0.000907 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.65 | 0.000533 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.67 | 0.000464 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.71 | 0.000475 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.71 | 0.000475 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.75 | 0.000056 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.75.1 | 0.00018 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.81 | 0.001992 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.83 | 0.001724 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.85 | 0.000427 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.87 | 0.000833 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | AY.9.2 | 0.000037 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.90 | 0.000684 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | AY.93 | 0.000273 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.94 | 0.000443 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | AY.98.1 | 0.000048 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | B.1.1 | 0.000018 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.10 | 0.001115 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.10 | 0.001115 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.138 | 0.006061 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.154 | 0.04 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.161 | 0.003534 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.161 | 0.003534 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.170 | 0.001247 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.176 | 0.000439 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.177 | 0.019231 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.189 | 0.001513 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.192 | 0.002309 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.196 | 0.005714 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.197 | 0.037037 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.216 | 0.00089 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.216 | 0.00089 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.218 | 0.007692 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.229 | 0.005747 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.234 | 0.012048 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.261 | 0.008621 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.277 | 0.000759 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.277 | 0.000759 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | B.1.1.28 | 0.000311 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | B.1.1.285 | 0.006536 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.286 | 0.002899 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.289 | 0.002083 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.312 | 0.001912 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.316 | 0.000925 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.317 | 0.000412 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.320 | 0.018182 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.326 | 0.001761 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.333 | 0.001076 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.335 | 0.012987 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.343 | 0.020833 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.344 | 0.010753 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.353 | 0.020833 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.354 | 0.004386 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.369 | 0.000446 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.409 | 0.002833 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.433 | 0.001425 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.47 | 0.005348 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.1.50 | 0.000679 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.517 | 0.006803 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.525 | 0.005464 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.57 | 0.011494 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | B.1.1.63 | 0.000386 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.1.75 | 0.010638 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.110 | 0.004525 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.111 | 0.001175 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.12 | 0.008 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.143 | 0.021277 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.147 | 0.000756 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.160.26 | 0.002421 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.160.27 | 0.015152 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.160.32 | 0.004292 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | B.1.177 | 0.000013 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | B.1.177.15 | 0.000631 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.177.16 | 0.000664 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.177.21 | 0.000076 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.177.24 | 0.001295 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | B.1.177.33 | 0.001645 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.177.44 | 0.000519 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.177.5 | 0.001242 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.177.5 | 0.001242 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.177.50 | 0.004695 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.177.54 | 0.000606 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.177.54 | 0.000606 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.177.63 | 0.002703 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.177.73 | 0.000566 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.177.81 | 0.000189 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.177.82 | 0.000477 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.177.85 | 0.005435 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.177.86 | 0.000183 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.177.87 | 0.000728 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.178 | 0.02381 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.180 | 0.05 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.192 | 0.009259 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.206 | 0.000816 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.210 | 0.002132 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.214.2 | 0.0006 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.219 | 0.009434 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.22 | 0.001318 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.222 | 0.001692 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.232 | 0.000537 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.239 | 0.001221 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.258.24 | 0.010753 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.264 | 0.012346 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.265 | 0.001271 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.270 | 0.005618 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.291 | 0.019231 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | B.1.298 | 0.002114 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.3 | 0.002618 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | B.1.320 | 0.001245 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.329 | 0.000608 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.349 | 0.000715 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.351.3 | 0.000876 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.36.1 | 0.00114 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.36.16 | 0.001425 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.36.22 | 0.001208 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.36.24 | 0.006173 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.36.26 | 0.002857 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.36.38 | 0.001642 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.36.8 | 0.001 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.361 | 0.001289 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.361 | 0.001289 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | B.1.362 | 0.001541 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.362 | 0.001541 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.362 | 0.001541 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.367 | 0.000792 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.369 | 0.000285 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.395 | 0.007042 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | B.1.400 | 0.000429 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.409 | 0.000781 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.420 | 0.010417 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.429.1 | 0.012048 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.433 | 0.003195 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.446 | 0.02 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.459 | 0.004082 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.466.2 | 0.000391 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.470 | 0.001404 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.487 | 0.019608 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | B.1.497 | 0.000315 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.497 | 0.000315 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.501 | 0.007353 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.509 | 0.000866 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.517 | 0.000427 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.520 | 0.021739 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.524 | 0.001406 |
noncoding | 29762 | C29762W | C | W | 1 | 1 | B.1.525 | 0.000113 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.532 | 0.006211 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.541 | 0.004425 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.546 | 0.003704 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.551 | 0.00129 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.564 | 0.000426 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.567 | 0.003333 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.568 | 0.001111 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.576 | 0.000907 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.577 | 0.000687 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.586 | 0.010989 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.588 | 0.00091 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.595.1 | 0.005848 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.599 | 0.00365 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.600 | 0.005848 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | B.1.617.2 | 0.000004 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.617.3 | 0.002985 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.619.1 | 0.000641 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.627 | 0.00202 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.628 | 0.000352 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.630 | 0.005236 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.81 | 0.021277 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.1.9.4 | 0.006135 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.1.9.5 | 0.005682 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.27 | 0.015385 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | B.29 | 0.003509 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.3.1 | 0.001658 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.4.5 | 0.011905 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.55 | 0.00295 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | B.6 | 0.00091 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | C.1.2 | 0.004255 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | C.1.2 | 0.004255 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | C.36.3 | 0.000567 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | C.36.3.1 | 0.002717 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | C.37 | 0.000116 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | C.37.1 | 0.002618 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | L.3 | 0.003546 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | P.1.1 | 0.000318 |
noncoding | 29762 | C29762A | C | A | 1 | 1 | P.1.1 | 0.000318 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | P.1.10 | 0.000269 |
noncoding | 29762 | C29762G | C | G | 1 | 1 | P.1.12 | 0.000484 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | P.1.17 | 0.000162 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | P.1.4 | 0.000977 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | P.1.5 | 0.076923 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | P.1.7 | 0.000319 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | P.3 | 0.001595 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | P.6 | 0.003145 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | Q.3 | 0.000145 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | Q.4 | 0.000455 |
noncoding | 29762 | C29762T | C | T | 1 | 1 | Q.8 | 0.000165 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | U.3 | 0.003861 |
noncoding | 29762 | C29762- | C | - | 1 | 1 | W.4 | 0.001351 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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