CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 29760 | T29760- | noncoding | T | - | 30340 | 30340 | 1 | 29760-29760 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 29760 | T29760- | T | - | 30340 | 30340 | All | 0.005803 |
noncoding | 29760 | T29760- | T | - | 9230 | 9230 | B.1.526 | 0.216947 |
noncoding | 29760 | T29760- | T | - | 3716 | 3716 | B.1.525 | 0.420505 |
noncoding | 29760 | T29760- | T | - | 2833 | 2833 | B.1.1.7 | 0.002536 |
noncoding | 29760 | T29760- | T | - | 2444 | 2444 | AY.4 | 0.003804 |
noncoding | 29760 | T29760- | T | - | 1763 | 1763 | B.1.1.311 | 0.631447 |
noncoding | 29760 | T29760- | T | - | 1175 | 1175 | AY.26 | 0.033264 |
noncoding | 29760 | T29760- | T | - | 827 | 827 | AY.38 | 0.412881 |
noncoding | 29760 | T29760- | T | - | 561 | 561 | P.1 | 0.008838 |
noncoding | 29760 | T29760- | T | - | 537 | 537 | B.1.617.2 | 0.002022 |
noncoding | 29760 | T29760- | T | - | 466 | 466 | AY.25 | 0.002803 |
noncoding | 29760 | T29760- | T | - | 453 | 453 | B.1.2 | 0.003989 |
noncoding | 29760 | T29760- | T | - | 351 | 351 | B.1 | 0.003215 |
noncoding | 29760 | T29760- | T | - | 299 | 299 | AY.39 | 0.007389 |
noncoding | 29760 | T29760- | T | - | 278 | 278 | B.1.177 | 0.003661 |
noncoding | 29760 | T29760- | T | - | 274 | 274 | AY.5 | 0.005658 |
noncoding | 29760 | T29760- | T | - | 211 | 211 | B.1.221 | 0.014988 |
noncoding | 29760 | T29760- | T | - | 185 | 185 | AY.103 | 0.001149 |
noncoding | 29760 | T29760- | T | - | 170 | 170 | B.1.1 | 0.003084 |
noncoding | 29760 | T29760- | T | - | 154 | 154 | AY.43 | 0.000682 |
noncoding | 29760 | T29760- | T | - | 144 | 144 | B.1.351 | 0.004281 |
noncoding | 29760 | T29760- | T | - | 143 | 143 | D.5 | 0.711443 |
noncoding | 29760 | T29760- | T | - | 122 | 122 | B.1.429 | 0.002871 |
noncoding | 29760 | T29760- | T | - | 105 | 105 | AY.47 | 0.003266 |
noncoding | 29760 | T29760- | T | - | 105 | 105 | B.1.177.81 | 0.019879 |
noncoding | 29760 | T29760- | T | - | 104 | 104 | C.37 | 0.012071 |
noncoding | 29760 | T29760- | T | - | 100 | 100 | B.1.1.63 | 0.03858 |
noncoding | 29760 | T29760- | T | - | 99 | 99 | B.1.1.519 | 0.003931 |
noncoding | 29760 | T29760- | T | - | 99 | 99 | B.1.160 | 0.003088 |
noncoding | 29760 | T29760- | T | - | 96 | 96 | AY.73 | 0.063872 |
noncoding | 29760 | T29760- | T | - | 93 | 93 | AZ.5 | 0.326316 |
noncoding | 29760 | T29760- | T | - | 89 | 89 | B.1.258 | 0.005923 |
noncoding | 29760 | T29760- | T | - | 88 | 88 | B.1.1.222 | 0.017952 |
noncoding | 29760 | T29760- | T | - | 83 | 83 | AY.3 | 0.000826 |
noncoding | 29760 | T29760- | T | - | 81 | 81 | AY.44 | 0.000493 |
noncoding | 29760 | T29760- | T | - | 78 | 78 | B.1.1.50 | 0.052953 |
noncoding | 29760 | T29760- | T | - | 77 | 77 | B.1.243 | 0.005358 |
noncoding | 29760 | T29760- | T | - | 76 | 76 | B.1.621 | 0.006727 |
noncoding | 29760 | T29760- | T | - | 72 | 72 | B.1.177.4 | 0.015196 |
noncoding | 29760 | T29760- | T | - | 72 | 72 | B.1.603 | 0.765957 |
noncoding | 29760 | T29760- | T | - | 69 | 69 | B.1.36.18 | 0.028992 |
noncoding | 29760 | T29760- | T | - | 65 | 65 | AY.99.2 | 0.00599 |
noncoding | 29760 | T29760- | T | - | 61 | 61 | C.16 | 0.064687 |
noncoding | 29760 | T29760- | T | - | 60 | 60 | AY.111 | 0.010989 |
noncoding | 29760 | T29760- | T | - | 54 | 54 | B.1.427 | 0.002727 |
noncoding | 29760 | T29760- | T | - | 50 | 50 | B.1.349 | 0.03574 |
noncoding | 29760 | T29760- | T | - | 46 | 46 | B.1.637 | 0.003361 |
noncoding | 29760 | T29760- | T | - | 42 | 42 | AY.120 | 0.001562 |
noncoding | 29760 | T29760- | T | - | 39 | 39 | B.1.177.9 | 0.051931 |
noncoding | 29760 | T29760- | T | - | 37 | 37 | AY.102 | 0.000981 |
noncoding | 29760 | T29760- | T | - | 37 | 37 | B.1.240 | 0.007976 |
noncoding | 29760 | T29760- | T | - | 35 | 35 | AY.29 | 0.000552 |
noncoding | 29760 | T29760- | T | - | 30 | 30 | B.1.1.120 | 1 |
noncoding | 29760 | T29760- | T | - | 28 | 28 | B.1.595 | 0.007307 |
noncoding | 29760 | T29760- | T | - | 28 | 28 | B.1.596 | 0.00244 |
noncoding | 29760 | T29760- | T | - | 27 | 27 | B.1.234 | 0.003562 |
noncoding | 29760 | T29760- | T | - | 27 | 27 | B.1.346 | 0.035387 |
noncoding | 29760 | T29760- | T | - | 26 | 26 | P.1.14 | 0.001243 |
noncoding | 29760 | T29760- | T | - | 24 | 24 | AY.20 | 0.000933 |
noncoding | 29760 | T29760- | T | - | 24 | 24 | AY.61 | 0.002515 |
noncoding | 29760 | T29760- | T | - | 22 | 22 | B.1.1.368 | 0.067901 |
noncoding | 29760 | T29760- | T | - | 22 | 22 | B.1.305 | 0.047312 |
noncoding | 29760 | T29760- | T | - | 21 | 21 | B.1.160.26 | 0.050847 |
noncoding | 29760 | T29760- | T | - | 21 | 21 | B.1.575 | 0.006371 |
noncoding | 29760 | T29760- | T | - | 19 | 19 | AY.100 | 0.000874 |
noncoding | 29760 | T29760- | T | - | 19 | 19 | AY.119 | 0.000671 |
noncoding | 29760 | T29760- | T | - | 19 | 19 | AY.42 | 0.000764 |
noncoding | 29760 | T29760- | T | - | 19 | 19 | AY.92 | 0.005458 |
noncoding | 29760 | T29760- | T | - | 19 | 19 | B.1.1.317 | 0.007822 |
noncoding | 29760 | T29760- | T | - | 19 | 19 | B.1.404 | 0.02474 |
noncoding | 29760 | T29760- | T | - | 18 | 18 | B.1.1.172 | 0.327273 |
noncoding | 29760 | T29760- | T | - | 18 | 18 | B.1.1.28 | 0.005602 |
noncoding | 29760 | T29760- | T | - | 18 | 18 | B.1.206 | 0.014682 |
noncoding | 29760 | T29760- | T | - | 18 | 18 | B.1.556 | 0.135338 |
noncoding | 29760 | T29760- | T | - | 18 | 18 | B.1.562 | 0.333333 |
noncoding | 29760 | T29760- | T | - | 17 | 17 | AY.5.4 | 0.004704 |
noncoding | 29760 | T29760- | T | - | 17 | 17 | AY.6 | 0.000699 |
noncoding | 29760 | T29760- | T | - | 17 | 17 | B.1.36 | 0.00248 |
noncoding | 29760 | T29760- | T | - | 16 | 16 | AY.46.5 | 0.003175 |
noncoding | 29760 | T29760- | T | - | 16 | 16 | B.1.1.214 | 0.000887 |
noncoding | 29760 | T29760- | T | - | 16 | 16 | B.1.1.434 | 0.005577 |
noncoding | 29760 | T29760- | T | - | 16 | 16 | B.1.139 | 0.01173 |
noncoding | 29760 | T29760- | T | - | 16 | 16 | B.1.177.6 | 0.015625 |
noncoding | 29760 | T29760- | T | - | 15 | 15 | AY.118 | 0.00094 |
noncoding | 29760 | T29760- | T | - | 15 | 15 | AY.4.2 | 0.000325 |
noncoding | 29760 | T29760- | T | - | 15 | 15 | AY.75.1 | 0.002705 |
noncoding | 29760 | T29760- | T | - | 15 | 15 | B.1.1.39 | 0.007645 |
noncoding | 29760 | T29760- | T | - | 15 | 15 | B.1.214.2 | 0.008993 |
noncoding | 29760 | T29760- | T | - | 15 | 15 | C.36.3 | 0.008508 |
noncoding | 29760 | T29760- | T | - | 14 | 14 | AY.9.2 | 0.000514 |
noncoding | 29760 | T29760- | T | - | 14 | 14 | AZ.2 | 0.011494 |
noncoding | 29760 | T29760- | T | - | 13 | 13 | B.1.1.416 | 0.011765 |
noncoding | 29760 | T29760- | T | - | 13 | 13 | B.1.1.420 | 0.013078 |
noncoding | 29760 | T29760- | T | - | 12 | 12 | AY.74 | 0.001388 |
noncoding | 29760 | T29760- | T | - | 12 | 12 | AY.75 | 0.000672 |
noncoding | 29760 | T29760- | T | - | 12 | 12 | AY.9 | 0.000811 |
noncoding | 29760 | T29760- | T | - | 12 | 12 | B.1.177.75 | 0.012487 |
noncoding | 29760 | T29760- | T | - | 12 | 12 | R.1 | 0.00108 |
noncoding | 29760 | T29760- | T | - | 11 | 11 | AY.114 | 0.002542 |
noncoding | 29760 | T29760- | T | - | 11 | 11 | AY.45 | 0.001339 |
noncoding | 29760 | T29760- | T | - | 11 | 11 | AY.46.6 | 0.000794 |
noncoding | 29760 | T29760- | T | - | 11 | 11 | B.1.1.265 | 0.0347 |
noncoding | 29760 | T29760- | T | - | 11 | 11 | B.1.1.33 | 0.00463 |
noncoding | 29760 | T29760- | T | - | 11 | 11 | B.1.36.29 | 0.005691 |
noncoding | 29760 | T29760- | T | - | 11 | 11 | D.2 | 0.000825 |
noncoding | 29760 | T29760- | T | - | 10 | 10 | AY.117 | 0.000845 |
noncoding | 29760 | T29760- | T | - | 10 | 10 | AY.46 | 0.001041 |
noncoding | 29760 | T29760- | T | - | 10 | 10 | B.1.177.86 | 0.001835 |
noncoding | 29760 | T29760- | T | - | 10 | 10 | B.1.258.17 | 0.00104 |
noncoding | 29760 | T29760- | T | - | 10 | 10 | B.1.623 | 0.005365 |
noncoding | 29760 | T29760- | T | - | 10 | 10 | P.1.4 | 0.009766 |
noncoding | 29760 | T29760- | T | - | 10 | 10 | P.2 | 0.001866 |
noncoding | 29760 | T29760- | T | - | 9 | 9 | AY.12 | 0.002845 |
noncoding | 29760 | T29760- | T | - | 9 | 9 | AY.14 | 0.000792 |
noncoding | 29760 | T29760- | T | - | 9 | 9 | AY.54 | 0.000858 |
noncoding | 29760 | T29760- | T | - | 9 | 9 | B.1.160.14 | 0.019068 |
noncoding | 29760 | T29760- | T | - | 9 | 9 | B.1.258.3 | 0.015075 |
noncoding | 29760 | T29760- | T | - | 9 | 9 | B.1.36.1 | 0.010262 |
noncoding | 29760 | T29760- | T | - | 9 | 9 | B.1.599 | 0.032847 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | AY.30 | 0.003166 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | AY.46.4 | 0.001316 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B | 0.001022 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B.1.1.1 | 0.002614 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B.1.1.153 | 0.008762 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B.1.1.303 | 0.022099 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B.1.1.316 | 0.007401 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B.1.311 | 0.002197 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B.1.36.22 | 0.009662 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B.1.396 | 0.005646 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B.1.582 | 0.003925 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | B.1.93 | 0.00747 |
noncoding | 29760 | T29760- | T | - | 8 | 8 | P.1.1 | 0.002541 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | A | 0.002709 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | AY.23 | 0.000488 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | AY.34 | 0.000679 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | AY.85 | 0.00299 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | AY.98.1 | 0.000339 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.1.306 | 0.003069 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.1.37 | 0.00135 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.1.526 | 0.024823 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.110.3 | 0.005029 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.160.33 | 0.030973 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.177.60 | 0.001529 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.177.7 | 0.001154 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.177.82 | 0.003341 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.398 | 0.020833 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | B.1.609 | 0.003356 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | P.1.15 | 0.001626 |
noncoding | 29760 | T29760- | T | - | 7 | 7 | P.1.17 | 0.001132 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | AY.62 | 0.002614 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | AY.98 | 0.000474 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | B.1.1.318 | 0.001811 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | B.1.1.446 | 0.461538 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | B.1.241 | 0.00487 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | B.1.36.31 | 0.010508 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | B.1.617.1 | 0.000774 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | N.4 | 0.025532 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | P.1.11 | 0.061224 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | P.1.16 | 0.002245 |
noncoding | 29760 | T29760- | T | - | 6 | 6 | P.1.7 | 0.001916 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | A.2.5 | 0.002495 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | AY.113 | 0.000712 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | AY.35 | 0.001165 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | AY.4.5 | 0.000537 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | AY.59 | 0.002648 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | AY.65 | 0.002665 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | B.1.1.198 | 0.007342 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | B.1.1.288 | 0.009579 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | B.1.177.12 | 0.000758 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | B.1.177.32 | 0.006748 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | B.1.416 | 0.006345 |
noncoding | 29760 | T29760- | T | - | 5 | 5 | P.5 | 0.068493 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | AY.13 | 0.000644 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | AY.33 | 0.000267 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | AY.48 | 0.00186 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | AY.69 | 0.000747 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.1.232 | 0.00726 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.1.25 | 0.002274 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.1.298 | 0.003448 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.1.312 | 0.007648 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.1.46 | 0.017467 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.1.462 | 0.034483 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.1.464 | 0.005891 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.104 | 0.01476 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.177.10 | 0.003512 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.177.17 | 0.003284 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.177.20 | 0.00607 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.177.21 | 0.000306 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.177.42 | 0.003578 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.177.73 | 0.002265 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.210 | 0.008529 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.351.3 | 0.003506 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.36.39 | 0.008869 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.400 | 0.001716 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.416.1 | 0.00625 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.466.2 | 0.001565 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.497 | 0.001259 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.588 | 0.00364 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.620 | 0.003784 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | B.1.9.4 | 0.02454 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | N.5 | 0.007067 |
noncoding | 29760 | T29760- | T | - | 4 | 4 | Q.3 | 0.00058 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AU.1 | 0.003797 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.105 | 0.001929 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.109 | 0.002219 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.110 | 0.000338 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.24 | 0.001293 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.3.1 | 0.000256 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.36 | 0.000445 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.40 | 0.002893 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.7 | 0.000588 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.70 | 0.000626 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.84 | 0.001312 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.88 | 0.002653 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | AY.89 | 0.014706 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.135 | 0.014085 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.139 | 0.068182 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.170 | 0.003741 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.174 | 0.010135 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.192 | 0.006928 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.236 | 0.02069 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.284 | 0.000322 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.325 | 0.076923 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.351 | 0.00838 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.375 | 0.035714 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.428 | 0.028302 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.1.432 | 0.003797 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.145 | 0.157895 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.177.37 | 0.081081 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.177.57 | 0.000843 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.177.62 | 0.003576 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.177.76 | 0.007481 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.177.87 | 0.002183 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.258.16 | 0.00491 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.36.16 | 0.004274 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.409 | 0.002344 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.44 | 0.025 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.1.590 | 0.013636 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | B.39 | 0.006993 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | P.1.12 | 0.001452 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | P.1.13 | 0.002695 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | Q.1 | 0.000379 |
noncoding | 29760 | T29760- | T | - | 3 | 3 | Q.4 | 0.001364 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | A.1 | 0.000564 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | A.2 | 0.001324 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | A.2.3 | 0.009479 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AN.1 | 0.04 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.106 | 0.00067 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.19 | 0.002281 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.39.1 | 0.000079 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.46.2 | 0.001271 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.46.3 | 0.001867 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.5.3 | 0.000675 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.52 | 0.001629 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.56 | 0.00321 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.67 | 0.000929 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.71 | 0.00095 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.9.1 | 0.000167 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | AY.95 | 0.001522 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.218 | 0.015385 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.274 | 0.010101 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.279 | 0.002242 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.294 | 0.002532 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.345 | 0.086957 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.348 | 0.001592 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.354 | 0.008772 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.369 | 0.000892 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.372 | 0.001377 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.397 | 0.004505 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.409 | 0.005666 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.417 | 0.005405 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.517 | 0.013605 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.1.528 | 0.009615 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.111 | 0.00235 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.160.16 | 0.001859 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.177.51 | 0.009132 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.177.65 | 0.001331 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.177.77 | 0.001452 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.214.3 | 0.014286 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.23 | 0.012121 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.258.14 | 0.001961 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.298 | 0.004228 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.301 | 0.011834 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.351.2 | 0.000605 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.36.26 | 0.005714 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.369 | 0.00057 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.375 | 0.001639 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.408 | 0.00738 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.422 | 0.001625 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.433 | 0.00639 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.436 | 0.002058 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.441 | 0.019231 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.462 | 0.014493 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.521 | 0.00995 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.561 | 0.000794 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.564 | 0.000852 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.565 | 0.001621 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.1.576 | 0.001813 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.3.1 | 0.003317 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.31 | 0.007463 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.4 | 0.004415 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | B.40 | 0.000729 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | C.14 | 0.008658 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | C.3 | 0.015267 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | C.35 | 0.001548 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | C.38 | 0.016129 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | P.1.10 | 0.000539 |
noncoding | 29760 | T29760- | T | - | 2 | 2 | P.1.6 | 0.003891 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | A.28 | 0.002646 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | A.9 | 0.045455 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AD.2 | 0.000219 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AK.2 | 0.045455 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AU.3 | 0.00211 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.10 | 0.00053 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.116 | 0.000287 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.120.1 | 0.000321 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.16 | 0.00038 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.2 | 0.000356 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.27 | 0.000065 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.29.1 | 0.000221 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.4.2.1 | 0.000149 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.51 | 0.000909 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.53 | 0.000288 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.55 | 0.000917 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.58 | 0.000907 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.81 | 0.001992 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | AY.87 | 0.000833 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.10 | 0.001115 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.138 | 0.006061 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.154 | 0.04 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.161 | 0.003534 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.177 | 0.019231 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.189 | 0.001513 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.196 | 0.005714 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.197 | 0.037037 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.205 | 0.003717 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.216 | 0.00089 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.227 | 0.004348 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.229 | 0.005747 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.231 | 0.003096 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.234 | 0.012048 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.277 | 0.000759 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.289 | 0.002083 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.326 | 0.001761 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.333 | 0.001076 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.344 | 0.010753 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.387 | 0.058824 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.398 | 0.003226 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.413 | 0.006897 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.433 | 0.001425 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.47 | 0.005348 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.525 | 0.005464 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.57 | 0.011494 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.71 | 0.006061 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.1.75 | 0.010638 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.110 | 0.004525 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.12 | 0.008 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.143 | 0.021277 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.147 | 0.000756 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.159 | 0.012195 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.160.27 | 0.015152 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.160.32 | 0.004292 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.177.18 | 0.00116 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.177.23 | 0.003236 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.177.24 | 0.001295 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.177.44 | 0.000519 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.177.5 | 0.001242 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.177.50 | 0.004695 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.177.54 | 0.000606 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.177.55 | 0.002331 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.177.85 | 0.005435 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.178 | 0.02381 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.180 | 0.05 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.181 | 0.019608 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.192 | 0.009259 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.219 | 0.009434 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.222 | 0.001692 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.232 | 0.000537 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.258.24 | 0.010753 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.291 | 0.019231 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.337 | 0.005587 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.36.17 | 0.000494 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.36.19 | 0.009259 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.36.8 | 0.001 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.36.9 | 0.003215 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.361 | 0.001289 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.367 | 0.000792 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.390 | 0.010638 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.420 | 0.010417 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.428.3 | 0.012821 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.429.1 | 0.012048 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.470 | 0.001404 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.478 | 0.011765 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.487 | 0.019608 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.503 | 0.002488 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.509 | 0.000866 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.517 | 0.000427 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.530 | 0.007143 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.532 | 0.006211 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.547 | 0.02439 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.564.1 | 0.001577 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.567 | 0.003333 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.568 | 0.001111 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.577 | 0.000687 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.580 | 0.004065 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.581 | 0.009434 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.595.1 | 0.005848 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.600 | 0.005848 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.617.3 | 0.002985 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.627 | 0.00202 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.628 | 0.000352 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.630 | 0.005236 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.81 | 0.021277 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.1.9.5 | 0.005682 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.27 | 0.015385 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.4.5 | 0.011905 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.55 | 0.00295 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.6 | 0.00091 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | B.6.6 | 0.000889 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | C.1 | 0.002392 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | C.1.2 | 0.004255 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | C.18 | 0.002591 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | C.36.3.1 | 0.002717 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | L.3 | 0.003546 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | P.1.5 | 0.076923 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | P.6 | 0.003145 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | Q.8 | 0.000165 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | U.3 | 0.003861 |
noncoding | 29760 | T29760- | T | - | 1 | 1 | W.4 | 0.001351 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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