CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29760

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29760T29760-noncodingT-3034030340129760-29760
noncoding29760T29760CnoncodingTC36413641129760-29760
noncoding29760T29760AnoncodingTA488488129760-29760
noncoding29760T29760GnoncodingTG119119129760-29760
noncoding29760T29760HnoncodingTH22129760-29760
noncoding29760T29760MnoncodingTM22129760-29760

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29760T29760-T-3034030340All0.005803
noncoding29760T29760-T-92309230B.1.5260.216947
noncoding29760T29760-T-37163716B.1.5250.420505
noncoding29760T29760CTC36413641All0.000696
noncoding29760T29760-T-28332833B.1.1.70.002536
noncoding29760T29760-T-24442444AY.40.003804
noncoding29760T29760CTC24102410B.1.20.021221
noncoding29760T29760-T-17631763B.1.1.3110.631447
noncoding29760T29760-T-11751175AY.260.033264
noncoding29760T29760-T-827827AY.380.412881
noncoding29760T29760-T-561561P.10.008838
noncoding29760T29760-T-537537B.1.617.20.002022
noncoding29760T29760ATA488488All0.000093
noncoding29760T29760CTC474474B.1.1.70.000424
noncoding29760T29760-T-466466AY.250.002803
noncoding29760T29760-T-453453B.1.20.003989
noncoding29760T29760-T-351351B.10.003215
noncoding29760T29760-T-299299AY.390.007389
noncoding29760T29760-T-278278B.1.1770.003661
noncoding29760T29760-T-274274AY.50.005658
noncoding29760T29760-T-211211B.1.2210.014988
noncoding29760T29760CTC206206AY.40.000321
noncoding29760T29760-T-185185AY.1030.001149
noncoding29760T29760-T-170170B.1.10.003084
noncoding29760T29760-T-154154AY.430.000682
noncoding29760T29760-T-144144B.1.3510.004281
noncoding29760T29760-T-143143D.50.711443
noncoding29760T29760-T-122122B.1.4290.002871
noncoding29760T29760GTG119119All0.000023
noncoding29760T29760-T-105105AY.470.003266
noncoding29760T29760-T-105105B.1.177.810.019879
noncoding29760T29760-T-104104C.370.012071
noncoding29760T29760-T-100100B.1.1.630.03858
noncoding29760T29760-T-9999B.1.1.5190.003931
noncoding29760T29760-T-9999B.1.1600.003088
noncoding29760T29760-T-9696AY.730.063872
noncoding29760T29760-T-9393AZ.50.326316
noncoding29760T29760ATA8989B.1.1.70.00008
noncoding29760T29760-T-8989B.1.2580.005923
noncoding29760T29760-T-8888B.1.1.2220.017952
noncoding29760T29760-T-8383AY.30.000826
noncoding29760T29760-T-8181AY.440.000493
noncoding29760T29760-T-7878B.1.1.500.052953
noncoding29760T29760-T-7777B.1.2430.005358
noncoding29760T29760-T-7676B.1.6210.006727
noncoding29760T29760-T-7272B.1.177.40.015196
noncoding29760T29760-T-7272B.1.6030.765957
noncoding29760T29760-T-6969B.1.36.180.028992
noncoding29760T29760ATA6868B.1.20.000599
noncoding29760T29760ATA6767P.10.001056
noncoding29760T29760-T-6565AY.99.20.00599
noncoding29760T29760-T-6161C.160.064687
noncoding29760T29760-T-6060AY.1110.010989
noncoding29760T29760ATA5454AY.40.000084
noncoding29760T29760-T-5454B.1.4270.002727
noncoding29760T29760CTC5151AY.1030.000317
noncoding29760T29760-T-5050B.1.3490.03574
noncoding29760T29760CTC4848AY.440.000292
noncoding29760T29760-T-4646B.1.6370.003361
noncoding29760T29760GTG4444B.1.5260.001034
noncoding29760T29760-T-4242AY.1200.001562
noncoding29760T29760CTC4141B.1.5960.003573
noncoding29760T29760CTC4040B.10.000366
noncoding29760T29760-T-3939B.1.177.90.051931
noncoding29760T29760-T-3737AY.1020.000981
noncoding29760T29760-T-3737B.1.2400.007976
noncoding29760T29760-T-3535AY.290.000552
noncoding29760T29760GTG3232B.1.1.70.000029
noncoding29760T29760-T-3030B.1.1.1201
noncoding29760T29760CTC2929B.1.617.20.000109
noncoding29760T29760-T-2828B.1.5950.007307
noncoding29760T29760-T-2828B.1.5960.00244
noncoding29760T29760-T-2727B.1.2340.003562
noncoding29760T29760-T-2727B.1.3460.035387
noncoding29760T29760-T-2626P.1.140.001243
noncoding29760T29760-T-2424AY.200.000933
noncoding29760T29760-T-2424AY.610.002515
noncoding29760T29760-T-2222B.1.1.3680.067901
noncoding29760T29760-T-2222B.1.3050.047312
noncoding29760T29760CTC2121AY.430.000093
noncoding29760T29760-T-2121B.1.160.260.050847
noncoding29760T29760-T-2121B.1.5750.006371
noncoding29760T29760CTC2020AY.1000.00092
noncoding29760T29760-T-1919AY.1000.000874
noncoding29760T29760-T-1919AY.1190.000671
noncoding29760T29760CTC1919AY.30.000189
noncoding29760T29760-T-1919AY.420.000764
noncoding29760T29760-T-1919AY.920.005458
noncoding29760T29760-T-1919B.1.1.3170.007822
noncoding29760T29760-T-1919B.1.4040.02474
noncoding29760T29760CTC1818B.1.10.000327
noncoding29760T29760-T-1818B.1.1.1720.327273
noncoding29760T29760-T-1818B.1.1.280.005602
noncoding29760T29760-T-1818B.1.2060.014682
noncoding29760T29760ATA1818B.1.2430.001253
noncoding29760T29760-T-1818B.1.5560.135338
noncoding29760T29760-T-1818B.1.5620.333333
noncoding29760T29760-T-1717AY.5.40.004704
noncoding29760T29760-T-1717AY.60.000699
noncoding29760T29760-T-1717B.1.360.00248
noncoding29760T29760-T-1616AY.46.50.003175
noncoding29760T29760-T-1616B.1.1.2140.000887
noncoding29760T29760-T-1616B.1.1.4340.005577
noncoding29760T29760-T-1616B.1.1390.01173
noncoding29760T29760-T-1616B.1.177.60.015625
noncoding29760T29760-T-1515AY.1180.00094
noncoding29760T29760-T-1515AY.4.20.000325
noncoding29760T29760-T-1515AY.75.10.002705
noncoding29760T29760CTC1515B.1.1.1760.006591
noncoding29760T29760-T-1515B.1.1.390.007645
noncoding29760T29760-T-1515B.1.214.20.008993
noncoding29760T29760-T-1515C.36.30.008508
noncoding29760T29760-T-1414AY.9.20.000514
noncoding29760T29760-T-1414AZ.20.011494
noncoding29760T29760ATA1414B.1.1.330.005892
noncoding29760T29760ATA1414B.1.4290.000329
noncoding29760T29760-T-1313B.1.1.4160.011765
noncoding29760T29760-T-1313B.1.1.4200.013078
noncoding29760T29760-T-1212AY.740.001388
noncoding29760T29760-T-1212AY.750.000672
noncoding29760T29760-T-1212AY.90.000811
noncoding29760T29760-T-1212B.1.177.750.012487
noncoding29760T29760-T-1212R.10.00108
noncoding29760T29760-T-1111AY.1140.002542
noncoding29760T29760-T-1111AY.450.001339
noncoding29760T29760-T-1111AY.46.60.000794
noncoding29760T29760-T-1111B.1.1.2650.0347
noncoding29760T29760-T-1111B.1.1.330.00463
noncoding29760T29760CTC1111B.1.2580.000732
noncoding29760T29760-T-1111B.1.36.290.005691
noncoding29760T29760ATA1111B.1.5960.000959
noncoding29760T29760-T-1111D.20.000825
noncoding29760T29760-T-1010AY.1170.000845
noncoding29760T29760-T-1010AY.460.001041
noncoding29760T29760-T-1010B.1.177.860.001835
noncoding29760T29760-T-1010B.1.258.170.00104
noncoding29760T29760ATA1010B.1.4270.000505
noncoding29760T29760-T-1010B.1.6230.005365
noncoding29760T29760-T-1010P.1.40.009766
noncoding29760T29760-T-1010P.20.001866
noncoding29760T29760-T-99AY.120.002845
noncoding29760T29760-T-99AY.140.000792
noncoding29760T29760ATA99AY.440.000055
noncoding29760T29760-T-99AY.540.000858
noncoding29760T29760ATA99B.1.1.5190.000357
noncoding29760T29760-T-99B.1.160.140.019068
noncoding29760T29760CTC99B.1.2400.00194
noncoding29760T29760-T-99B.1.258.30.015075
noncoding29760T29760-T-99B.1.36.10.010262
noncoding29760T29760ATA99B.1.438.10.000965
noncoding29760T29760-T-99B.1.5990.032847
noncoding29760T29760ATA99B.1.617.20.000034
noncoding29760T29760CTC88AY.250.000048
noncoding29760T29760-T-88AY.300.003166
noncoding29760T29760-T-88AY.46.40.001316
noncoding29760T29760-T-88B0.001022
noncoding29760T29760-T-88B.1.1.10.002614
noncoding29760T29760-T-88B.1.1.1530.008762
noncoding29760T29760-T-88B.1.1.3030.022099
noncoding29760T29760-T-88B.1.1.3160.007401
noncoding29760T29760-T-88B.1.3110.002197
noncoding29760T29760-T-88B.1.36.220.009662
noncoding29760T29760-T-88B.1.3960.005646
noncoding29760T29760GTG88B.1.4290.000188
noncoding29760T29760-T-88B.1.5820.003925
noncoding29760T29760-T-88B.1.930.00747
noncoding29760T29760CTC88P.10.000126
noncoding29760T29760-T-88P.1.10.002541
noncoding29760T29760-T-77A0.002709
noncoding29760T29760-T-77AY.230.000488
noncoding29760T29760-T-77AY.340.000679
noncoding29760T29760-T-77AY.850.00299
noncoding29760T29760-T-77AY.98.10.000339
noncoding29760T29760-T-77B.1.1.3060.003069
noncoding29760T29760-T-77B.1.1.370.00135
noncoding29760T29760-T-77B.1.1.5260.024823
noncoding29760T29760-T-77B.1.110.30.005029
noncoding29760T29760-T-77B.1.160.330.030973
noncoding29760T29760-T-77B.1.177.600.001529
noncoding29760T29760-T-77B.1.177.70.001154
noncoding29760T29760-T-77B.1.177.820.003341
noncoding29760T29760-T-77B.1.3980.020833
noncoding29760T29760-T-77B.1.6090.003356
noncoding29760T29760-T-77P.1.150.001626
noncoding29760T29760-T-77P.1.170.001132
noncoding29760T29760CTC66AY.1020.000159
noncoding29760T29760CTC66AY.4.50.000645
noncoding29760T29760CTC66AY.50.000124
noncoding29760T29760CTC66AY.590.003178
noncoding29760T29760-T-66AY.620.002614
noncoding29760T29760-T-66AY.980.000474
noncoding29760T29760GTG66B.10.000055
noncoding29760T29760ATA66B.10.000055
noncoding29760T29760-T-66B.1.1.3180.001811
noncoding29760T29760-T-66B.1.1.4460.461538
noncoding29760T29760CTC66B.1.1600.000187
noncoding29760T29760-T-66B.1.2410.00487
noncoding29760T29760ATA66B.1.36.180.002521
noncoding29760T29760-T-66B.1.36.310.010508
noncoding29760T29760-T-66B.1.617.10.000774
noncoding29760T29760-T-66N.40.025532
noncoding29760T29760-T-66P.1.110.061224
noncoding29760T29760-T-66P.1.160.002245
noncoding29760T29760-T-66P.1.70.001916
noncoding29760T29760CTC66R.10.00054
noncoding29760T29760-T-55A.2.50.002495
noncoding29760T29760-T-55AY.1130.000712
noncoding29760T29760-T-55AY.350.001165
noncoding29760T29760-T-55AY.4.50.000537
noncoding29760T29760-T-55AY.590.002648
noncoding29760T29760-T-55AY.650.002665
noncoding29760T29760-T-55B.1.1.1980.007342
noncoding29760T29760-T-55B.1.1.2880.009579
noncoding29760T29760CTC55B.1.1770.000066
noncoding29760T29760-T-55B.1.177.120.000758
noncoding29760T29760-T-55B.1.177.320.006748
noncoding29760T29760CTC55B.1.2340.00066
noncoding29760T29760CTC55B.1.2430.000348
noncoding29760T29760CTC55B.1.3510.000149
noncoding29760T29760-T-55B.1.4160.006345
noncoding29760T29760CTC55B.1.4290.000118
noncoding29760T29760CTC55B.1.466.20.001956
noncoding29760T29760CTC55C.370.00058
noncoding29760T29760-T-55P.50.068493
noncoding29760T29760-T-44AY.130.000644
noncoding29760T29760CTC44AY.230.000279
noncoding29760T29760-T-44AY.330.000267
noncoding29760T29760CTC44AY.390.000099
noncoding29760T29760CTC44AY.4.20.000087
noncoding29760T29760CTC44AY.450.000487
noncoding29760T29760-T-44AY.480.00186
noncoding29760T29760-T-44AY.690.000747
noncoding29760T29760CTC44AY.98.10.000194
noncoding29760T29760ATA44B.1.10.000073
noncoding29760T29760-T-44B.1.1.2320.00726
noncoding29760T29760-T-44B.1.1.250.002274
noncoding29760T29760-T-44B.1.1.2980.003448
noncoding29760T29760-T-44B.1.1.3120.007648
noncoding29760T29760-T-44B.1.1.460.017467
noncoding29760T29760-T-44B.1.1.4620.034483
noncoding29760T29760-T-44B.1.1.4640.005891
noncoding29760T29760-T-44B.1.1040.01476
noncoding29760T29760-T-44B.1.177.100.003512
noncoding29760T29760-T-44B.1.177.170.003284
noncoding29760T29760-T-44B.1.177.200.00607
noncoding29760T29760-T-44B.1.177.210.000306
noncoding29760T29760-T-44B.1.177.420.003578
noncoding29760T29760-T-44B.1.177.730.002265
noncoding29760T29760ATA44B.1.177.810.000757
noncoding29760T29760-T-44B.1.2100.008529
noncoding29760T29760ATA44B.1.2210.000284
noncoding29760T29760-T-44B.1.351.30.003506
noncoding29760T29760-T-44B.1.36.390.008869
noncoding29760T29760-T-44B.1.4000.001716
noncoding29760T29760-T-44B.1.416.10.00625
noncoding29760T29760GTG44B.1.4270.000202
noncoding29760T29760CTC44B.1.4270.000202
noncoding29760T29760-T-44B.1.466.20.001565
noncoding29760T29760-T-44B.1.4970.001259
noncoding29760T29760ATA44B.1.5260.000094
noncoding29760T29760-T-44B.1.5880.00364
noncoding29760T29760CTC44B.1.5950.001044
noncoding29760T29760-T-44B.1.6200.003784
noncoding29760T29760ATA44B.1.6370.000292
noncoding29760T29760-T-44B.1.9.40.02454
noncoding29760T29760-T-44N.50.007067
noncoding29760T29760-T-44Q.30.00058
noncoding29760T29760-T-33AU.10.003797
noncoding29760T29760-T-33AY.1050.001929
noncoding29760T29760-T-33AY.1090.002219
noncoding29760T29760-T-33AY.1100.000338
noncoding29760T29760-T-33AY.240.001293
noncoding29760T29760ATA33AY.250.000018
noncoding29760T29760ATA33AY.260.000085
noncoding29760T29760CTC33AY.260.000085
noncoding29760T29760-T-33AY.3.10.000256
noncoding29760T29760-T-33AY.360.000445
noncoding29760T29760-T-33AY.400.002893
noncoding29760T29760-T-33AY.70.000588
noncoding29760T29760-T-33AY.700.000626
noncoding29760T29760-T-33AY.840.001312
noncoding29760T29760-T-33AY.880.002653
noncoding29760T29760-T-33AY.890.014706
noncoding29760T29760ATA33AY.99.20.000276
noncoding29760T29760-T-33B.1.1.1350.014085
noncoding29760T29760-T-33B.1.1.1390.068182
noncoding29760T29760-T-33B.1.1.1700.003741
noncoding29760T29760-T-33B.1.1.1740.010135
noncoding29760T29760-T-33B.1.1.1920.006928
noncoding29760T29760-T-33B.1.1.2360.02069
noncoding29760T29760-T-33B.1.1.2840.000322
noncoding29760T29760CTC33B.1.1.3160.002775
noncoding29760T29760-T-33B.1.1.3250.076923
noncoding29760T29760-T-33B.1.1.3510.00838
noncoding29760T29760-T-33B.1.1.3750.035714
noncoding29760T29760-T-33B.1.1.4280.028302
noncoding29760T29760-T-33B.1.1.4320.003797
noncoding29760T29760ATA33B.1.1.4340.001046
noncoding29760T29760CTC33B.1.1.5190.000119
noncoding29760T29760CTC33B.1.110.30.002155
noncoding29760T29760-T-33B.1.1450.157895
noncoding29760T29760-T-33B.1.177.370.081081
noncoding29760T29760-T-33B.1.177.570.000843
noncoding29760T29760-T-33B.1.177.620.003576
noncoding29760T29760CTC33B.1.177.730.001699
noncoding29760T29760-T-33B.1.177.760.007481
noncoding29760T29760-T-33B.1.177.870.002183
noncoding29760T29760-T-33B.1.258.160.00491
noncoding29760T29760ATA33B.1.2790.001541
noncoding29760T29760CTC33B.1.3110.000824
noncoding29760T29760-T-33B.1.36.160.004274
noncoding29760T29760-T-33B.1.4090.002344
noncoding29760T29760-T-33B.1.440.025
noncoding29760T29760CTC33B.1.5260.000071
noncoding29760T29760CTC33B.1.5640.001278
noncoding29760T29760-T-33B.1.5900.013636
noncoding29760T29760ATA33B.1.6030.031915
noncoding29760T29760CTC33B.1.617.10.000387
noncoding29760T29760CTC33B.1.6210.000266
noncoding29760T29760GTG33B.1.6370.000219
noncoding29760T29760-T-33B.390.006993
noncoding29760T29760-T-33P.1.120.001452
noncoding29760T29760-T-33P.1.130.002695
noncoding29760T29760-T-33Q.10.000379
noncoding29760T29760-T-33Q.40.001364
noncoding29760T29760ATA22A.10.000564
noncoding29760T29760-T-22A.10.000564
noncoding29760T29760-T-22A.20.001324
noncoding29760T29760-T-22A.2.30.009479
noncoding29760T29760HTH22All0
noncoding29760T29760MTM22All0
noncoding29760T29760-T-22AN.10.04
noncoding29760T29760ATA22AY.1030.000012
noncoding29760T29760-T-22AY.1060.00067
noncoding29760T29760CTC22AY.1170.000169
noncoding29760T29760-T-22AY.190.002281
noncoding29760T29760ATA22AY.270.000129
noncoding29760T29760-T-22AY.39.10.000079
noncoding29760T29760-T-22AY.46.20.001271
noncoding29760T29760-T-22AY.46.30.001867
noncoding29760T29760-T-22AY.5.30.000675
noncoding29760T29760-T-22AY.520.001629
noncoding29760T29760CTC22AY.530.000575
noncoding29760T29760-T-22AY.560.00321
noncoding29760T29760CTC22AY.570.001312
noncoding29760T29760-T-22AY.670.000929
noncoding29760T29760-T-22AY.710.00095
noncoding29760T29760-T-22AY.9.10.000167
noncoding29760T29760-T-22AY.950.001522
noncoding29760T29760-T-22B.1.1.2180.015385
noncoding29760T29760-T-22B.1.1.2740.010101
noncoding29760T29760-T-22B.1.1.2790.002242
noncoding29760T29760CTC22B.1.1.280.000622
noncoding29760T29760ATA22B.1.1.280.000622
noncoding29760T29760-T-22B.1.1.2940.002532
noncoding29760T29760-T-22B.1.1.3450.086957
noncoding29760T29760-T-22B.1.1.3480.001592
noncoding29760T29760-T-22B.1.1.3540.008772
noncoding29760T29760-T-22B.1.1.3690.000892
noncoding29760T29760-T-22B.1.1.3720.001377
noncoding29760T29760-T-22B.1.1.3970.004505
noncoding29760T29760-T-22B.1.1.4090.005666
noncoding29760T29760-T-22B.1.1.4170.005405
noncoding29760T29760-T-22B.1.1.5170.013605
noncoding29760T29760-T-22B.1.1.5280.009615
noncoding29760T29760CTC22B.1.1.540.006042
noncoding29760T29760-T-22B.1.1110.00235
noncoding29760T29760-T-22B.1.160.160.001859
noncoding29760T29760-T-22B.1.177.510.009132
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