CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29739

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29739C29739-noncodingC-3334333343129739-29739
noncoding29739C29739TnoncodingCT38063806129739-29739
noncoding29739C29739GnoncodingCG340340129739-29739
noncoding29739C29739AnoncodingCA126126129739-29739
noncoding29739C29739KnoncodingCK11129739-29739

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29739C29739-C-3334333343All0.006377
noncoding29739C29739-C-93769376B.1.5260.220378
noncoding29739C29739-C-50365036B.1.1.70.004508
noncoding29739C29739TCT38063806All0.000728
noncoding29739C29739-C-37163716B.1.5250.420505
noncoding29739C29739-C-19581958AY.40.003047
noncoding29739C29739-C-17621762B.1.1.3110.631089
noncoding29739C29739TCT13251325B.1.1.70.001186
noncoding29739C29739-C-832832AY.380.415377
noncoding29739C29739-C-543543B.1.4290.012776
noncoding29739C29739-C-527527B.1.617.20.001984
noncoding29739C29739-C-401401B.1.1770.00528
noncoding29739C29739-C-391391B.10.003581
noncoding29739C29739-C-373373B.1.177.810.070617
noncoding29739C29739-C-365365B.1.351.20.110439
noncoding29739C29739-C-355355B.1.4970.111741
noncoding29739C29739-C-346346B.1.20.003047
noncoding29739C29739GCG340340All0.000065
noncoding29739C29739-C-306306P.10.004821
noncoding29739C29739-C-304304AY.390.007512
noncoding29739C29739-C-286286AY.50.005906
noncoding29739C29739-C-286286B.1.258.110.113357
noncoding29739C29739-C-276276AY.250.00166
noncoding29739C29739-C-217217B.1.10.003937
noncoding29739C29739-C-217217B.1.2210.015414
noncoding29739C29739TCT201201AY.40.000313
noncoding29739C29739-C-200200B.1.1600.006238
noncoding29739C29739-C-187187AY.1030.001161
noncoding29739C29739TCT183183A.290.973404
noncoding29739C29739-C-169169B.1.3510.005024
noncoding29739C29739GCG158158AY.40.000246
noncoding29739C29739-C-158158B.1.6260.902857
noncoding29739C29739-C-156156AY.430.000691
noncoding29739C29739-C-154154B.1.6210.013632
noncoding29739C29739TCT151151AY.1170.012762
noncoding29739C29739TCT147147AY.430.000651
noncoding29739C29739-C-145145AY.46.60.01047
noncoding29739C29739-C-144144D.50.716418
noncoding29739C29739TCT142142B.1.6300.743455
noncoding29739C29739-C-137137B.1.4270.006918
noncoding29739C29739TCT133133B.1.617.20.000501
noncoding29739C29739ACA126126All0.000024
noncoding29739C29739-C-113113AY.1200.004201
noncoding29739C29739-C-110110B.1.2580.00732
noncoding29739C29739-C-109109B.1.1.5190.004328
noncoding29739C29739-C-108108AY.440.000657
noncoding29739C29739-C-104104B.1.1.2940.131646
noncoding29739C29739-C-102102AY.420.004103
noncoding29739C29739-C-101101B.1.1.630.038966
noncoding29739C29739-C-9797AY.470.003017
noncoding29739C29739-C-9696AY.730.063872
noncoding29739C29739-C-9090AY.30.000895
noncoding29739C29739TCT8888P.1.140.004207
noncoding29739C29739GCG8383B.1.1.2140.004603
noncoding29739C29739-C-8080B.1.2430.005567
noncoding29739C29739TCT7676B.1.1.5190.003018
noncoding29739C29739TCT7272B.1.1.2140.003993
noncoding29739C29739TCT7070B.1.20.000616
noncoding29739C29739-C-6767B.1.5960.005838
noncoding29739C29739-C-6565B.1.5610.025804
noncoding29739C29739TCT6363B.1.3510.001873
noncoding29739C29739TCT6262B.10.000568
noncoding29739C29739-C-5757D.20.004277
noncoding29739C29739-C-5454B.1.2410.043831
noncoding29739C29739-C-5050AY.200.001943
noncoding29739C29739-C-4848C.160.050901
noncoding29739C29739TCT4646AY.440.00028
noncoding29739C29739-C-4646R.10.00414
noncoding29739C29739ACA4444AY.1030.000273
noncoding29739C29739-C-4444B.1.177.240.056995
noncoding29739C29739-C-4444P.1.140.002103
noncoding29739C29739-C-4343B.1.177.600.009393
noncoding29739C29739-C-4141AY.1020.001087
noncoding29739C29739-C-4141P.1.160.015339
noncoding29739C29739-C-4040C.370.004643
noncoding29739C29739-C-3838B.1.6370.002777
noncoding29739C29739-C-3838M.10.883721
noncoding29739C29739TCT3636AY.1020.000955
noncoding29739C29739-C-3636AY.260.001019
noncoding29739C29739TCT3636AY.30.000358
noncoding29739C29739-C-3535AY.290.000552
noncoding29739C29739-C-3434AY.1190.0012
noncoding29739C29739TCT3434B.1.1.280.010582
noncoding29739C29739-C-3333B.1.258.170.003431
noncoding29739C29739TCT3333P.10.00052
noncoding29739C29739TCT3232AY.250.000192
noncoding29739C29739-C-3232B.1.36.180.013445
noncoding29739C29739-C-3232B.1.5950.008351
noncoding29739C29739TCT3131B.1.10.000562
noncoding29739C29739-C-3131B.1.1.4340.010805
noncoding29739C29739TCT3030B.1.1770.000395
noncoding29739C29739-C-2929AY.1000.001334
noncoding29739C29739-C-2929AY.4.20.000629
noncoding29739C29739-C-2929B.1.6190.025261
noncoding29739C29739TCT2828B.1.4290.000659
noncoding29739C29739-C-2828B.1.6230.015021
noncoding29739C29739TCT2727AY.1030.000168
noncoding29739C29739-C-2727B.1.1.370.005207
noncoding29739C29739-C-2727B.1.3460.035387
noncoding29739C29739TCT2727B.1.5260.000635
noncoding29739C29739-C-2626AY.60.001069
noncoding29739C29739TCT2424B.1.1.1090.96
noncoding29739C29739TCT2323AY.290.000363
noncoding29739C29739-C-2222B.1.1.2220.004488
noncoding29739C29739-C-2222B.1.1.3680.067901
noncoding29739C29739-C-2121B.1.1.2650.066246
noncoding29739C29739-C-2121B.1.1.390.010703
noncoding29739C29739GCG2121B.1.1.70.000019
noncoding29739C29739-C-2121B.1.2400.004527
noncoding29739C29739-C-2121B.1.3050.045161
noncoding29739C29739-C-2121B.1.4040.027344
noncoding29739C29739TCT2020B.1.4080.073801
noncoding29739C29739-C-2020B.1.5760.018132
noncoding29739C29739-C-2020B.1.5880.018198
noncoding29739C29739-C-1919AY.920.005458
noncoding29739C29739TCT1919B.1.1.500.012899
noncoding29739C29739-C-1818AY.450.00219
noncoding29739C29739-C-1818B.1.1.1720.327273
noncoding29739C29739-C-1818B.1.1.280.005602
noncoding29739C29739-C-1818B.1.1.3070.04557
noncoding29739C29739-C-1818B.1.2890.047872
noncoding29739C29739-C-1818B.1.5560.135338
noncoding29739C29739-C-1818B.1.5750.005461
noncoding29739C29739-C-1818P.20.003359
noncoding29739C29739-C-1717AY.1180.001065
noncoding29739C29739-C-1717B.1.1.1740.057432
noncoding29739C29739-C-1717B.1.1.2140.000943
noncoding29739C29739-C-1717B.1.1.330.007155
noncoding29739C29739GCG1717B.1.1770.000224
noncoding29739C29739-C-1717B.1.3110.004668
noncoding29739C29739-C-1717B.1.5620.314815
noncoding29739C29739TCT1616AY.330.001068
noncoding29739C29739-C-1616B.1.1.1530.017525
noncoding29739C29739-C-1616B.1.177.860.002935
noncoding29739C29739TCT1616B.1.2210.001137
noncoding29739C29739-C-1616B.1.258.140.015686
noncoding29739C29739TCT1515A0.005805
noncoding29739C29739TCT1515AY.200.000583
noncoding29739C29739-C-1515B.1.36.10.017104
noncoding29739C29739-C-1515B.1.36.290.00776
noncoding29739C29739TCT1414AY.260.000396
noncoding29739C29739TCT1414AY.390.000346
noncoding29739C29739-C-1414AY.610.001467
noncoding29739C29739-C-1414AY.75.10.002524
noncoding29739C29739-C-1414B.1.177.70.002308
noncoding29739C29739-C-1414B.1.5810.132075
noncoding29739C29739-C-1313AY.740.001503
noncoding29739C29739-C-1313AY.98.10.00063
noncoding29739C29739-C-1313B.1.1.250.007391
noncoding29739C29739-C-1313B.1.1.3060.005699
noncoding29739C29739-C-1313B.1.4160.016497
noncoding29739C29739-C-1212AY.9.20.000441
noncoding29739C29739TCT1212B0.001534
noncoding29739C29739-C-1212B.1.1.4160.01086
noncoding29739C29739TCT1212B.1.1600.000374
noncoding29739C29739-C-1212B.1.177.750.012487
noncoding29739C29739-C-1212B.1.360.001751
noncoding29739C29739TCT1212P.20.00224
noncoding29739C29739-C-1111A.10.0031
noncoding29739C29739-C-1111AY.1170.00093
noncoding29739C29739-C-1111AY.750.000616
noncoding29739C29739-C-1111AY.90.000744
noncoding29739C29739-C-1111B.1.1.3170.004529
noncoding29739C29739-C-1111B.1.177.60.010742
noncoding29739C29739-C-1111B.1.177.620.013111
noncoding29739C29739-C-1111B.1.2340.001451
noncoding29739C29739TCT1111B.1.4270.000555
noncoding29739C29739TCT1111B.1.6030.117021
noncoding29739C29739-C-1111P.1.150.002556
noncoding29739C29739TCT1111R.10.00099
noncoding29739C29739-C-1010AY.1140.002311
noncoding29739C29739-C-1010AY.230.000697
noncoding29739C29739TCT1010AY.420.000402
noncoding29739C29739-C-1010AY.46.40.001645
noncoding29739C29739-C-1010B0.001278
noncoding29739C29739-C-1010B.1.1.3970.022523
noncoding29739C29739-C-1010B.1.4000.00429
noncoding29739C29739-C-1010B.1.5990.036496
noncoding29739C29739TCT1010B.1.6370.000731
noncoding29739C29739-C-1010P.1.40.009766
noncoding29739C29739ACA99AY.1020.000239
noncoding29739C29739TCT99AY.1190.000318
noncoding29739C29739-C-99AY.120.002845
noncoding29739C29739TCT99AY.120.10.002889
noncoding29739C29739-C-99AY.20.003205
noncoding29739C29739-C-99AY.34.10.004589
noncoding29739C29739-C-99AY.460.000937
noncoding29739C29739-C-99AY.46.50.001786
noncoding29739C29739ACA99B.1.1.70.000008
noncoding29739C29739-C-99B.1.1490.030822
noncoding29739C29739-C-99B.1.160.140.019068
noncoding29739C29739-C-99B.1.177.500.042254
noncoding29739C29739TCT99B.1.2080.36
noncoding29739C29739TCT99B.1.258.140.008824
noncoding29739C29739-C-99B.1.258.30.015075
noncoding29739C29739-C-99B.1.3980.026786
noncoding29739C29739-C-99B.1.4220.007311
noncoding29739C29739TCT99B.1.466.20.003521
noncoding29739C29739-C-99P.1.70.002874
noncoding29739C29739-C-88AY.340.000776
noncoding29739C29739TCT88AY.50.000165
noncoding29739C29739-C-88AY.540.000763
noncoding29739C29739-C-88AY.99.20.000737
noncoding29739C29739-C-88B.1.1.3160.007401
noncoding29739C29739TCT88B.1.2580.000532
noncoding29739C29739TCT88B.1.360.001167
noncoding29739C29739-C-88B.1.36.220.009662
noncoding29739C29739-C-88B.1.466.20.00313
noncoding29739C29739-C-88B.1.930.00747
noncoding29739C29739-C-88C.36.30.004538
noncoding29739C29739-C-88P.1.10.002541
noncoding29739C29739TCT88P.1.150.001859
noncoding29739C29739-C-88Q.40.003638
noncoding29739C29739TCT77A.160.112903
noncoding29739C29739TCT77AD.20.001533
noncoding29739C29739TCT77AY.1090.005178
noncoding29739C29739-C-77AY.130.001127
noncoding29739C29739TCT77AY.460.000729
noncoding29739C29739-C-77AY.850.00299
noncoding29739C29739TCT77B.1.1.250.00398
noncoding29739C29739TCT77B.1.1.3060.003069
noncoding29739C29739-C-77B.1.1.5260.024823
noncoding29739C29739-C-77B.1.160.330.030973
noncoding29739C29739TCT77B.1.177.600.001529
noncoding29739C29739TCT77B.1.36.220.008454
noncoding29739C29739-C-77B.1.3990.01354
noncoding29739C29739GCG77B.1.617.20.000026
noncoding29739C29739TCT77C.370.000812
noncoding29739C29739-C-66A0.002322
noncoding29739C29739TCT66AY.1000.000276
noncoding29739C29739-C-66AY.140.000528
noncoding29739C29739-C-66AY.330.000401
noncoding29739C29739-C-66AY.350.001398
noncoding29739C29739TCT66AY.4.20.00013
noncoding29739C29739TCT66AY.470.000187
noncoding29739C29739-C-66AY.650.003198
noncoding29739C29739ACA66AY.90.000406
noncoding29739C29739TCT66AY.980.000474
noncoding29739C29739TCT66AY.99.20.000553
noncoding29739C29739ACA66B.1.1.2980.005172
noncoding29739C29739-C-66B.1.1.3180.001811
noncoding29739C29739-C-66B.1.110.30.00431
noncoding29739C29739-C-66B.1.177.120.00091
noncoding29739C29739TCT66B.1.177.820.002864
noncoding29739C29739TCT66B.1.2430.000418
noncoding29739C29739-C-66B.1.3890.006012
noncoding29739C29739-C-66B.1.6090.002876
noncoding29739C29739ACA66B.1.617.20.000023
noncoding29739C29739-C-66B.390.013986
noncoding29739C29739-C-66B.400.002186
noncoding29739C29739-C-66N.40.025532
noncoding29739C29739-C-66N.50.010601
noncoding29739C29739-C-66Q.20.003681
noncoding29739C29739TCT66Q.80.000989
noncoding29739C29739TCT55AY.1180.000313
noncoding29739C29739TCT55AY.1200.000186
noncoding29739C29739TCT55AY.230.000349
noncoding29739C29739-C-55AY.360.000741
noncoding29739C29739TCT55AY.720.006803
noncoding29739C29739-C-55B.1.1.1890.007564
noncoding29739C29739-C-55B.1.1.1980.007342
noncoding29739C29739-C-55B.1.1.2880.009579
noncoding29739C29739TCT55B.1.1.3260.008803
noncoding29739C29739-C-55B.1.1.3690.002231
noncoding29739C29739-C-55B.1.177.320.006748
noncoding29739C29739-C-55B.1.177.730.002831
noncoding29739C29739-C-55B.1.177.870.003639
noncoding29739C29739-C-55B.1.2100.010661
noncoding29739C29739TCT55B.1.258.170.00052
noncoding29739C29739-C-55B.1.2790.002568
noncoding29739C29739TCT55B.1.2980.010571
noncoding29739C29739-C-55B.1.416.10.007812
noncoding29739C29739TCT55B.1.6210.000443
noncoding29739C29739-C-55P.1.120.00242
noncoding29739C29739-C-55P.1.170.000809
noncoding29739C29739-C-55P.50.068493
noncoding29739C29739-C-44A.2.50.001996
noncoding29739C29739TCT44A.23.10.002817
noncoding29739C29739-C-44AY.1090.002959
noncoding29739C29739-C-44AY.300.001583
noncoding29739C29739TCT44AY.340.000388
noncoding29739C29739ACA44AY.40.000006
noncoding29739C29739-C-44AY.590.002119
noncoding29739C29739-C-44AY.840.00175
noncoding29739C29739-C-44B.1.1.10.001307
noncoding29739C29739-C-44B.1.1.3120.007648
noncoding29739C29739-C-44B.1.1.3370.014388
noncoding29739C29739-C-44B.1.1.3850.017857
noncoding29739C29739-C-44B.1.1.410.025316
noncoding29739C29739TCT44B.1.1.4320.005063
noncoding29739C29739-C-44B.1.1.460.017467
noncoding29739C29739-C-44B.1.1.4620.034483
noncoding29739C29739-C-44B.1.1.4640.005891
noncoding29739C29739-C-44B.1.177.180.00464
noncoding29739C29739-C-44B.1.177.420.003578
noncoding29739C29739-C-44B.1.177.560.00267
noncoding29739C29739TCT44B.1.177.830.005926
noncoding29739C29739GCG44B.1.20.000035
noncoding29739C29739TCT44B.1.258.30.0067
noncoding29739C29739-C-44B.1.351.30.003506
noncoding29739C29739TCT44B.1.3610.005155
noncoding29739C29739-C-44B.1.438.10.000429
noncoding29739C29739-C-44B.1.4690.01444
noncoding29739C29739TCT44B.1.5250.000453
noncoding29739C29739ACA44B.1.5250.000453
noncoding29739C29739-C-44B.1.5680.004444
noncoding29739C29739-C-44B.1.5820.001963
noncoding29739C29739TCT44B.400.001457
noncoding29739C29739ACA44P.10.000063
noncoding29739C29739TCT44Q.10.000505
noncoding29739C29739TCT33A.270.004967
noncoding29739C29739-C-33AY.1100.000338
noncoding29739C29739GCG33AY.1110.000549
noncoding29739C29739GCG33AY.1200.000112
noncoding29739C29739TCT33AY.130.000483
noncoding29739C29739-C-33AY.270.000194
noncoding29739C29739-C-33AY.3.10.000256
noncoding29739C29739-C-33AY.320.001597
noncoding29739C29739TCT33AY.34.10.00153
noncoding29739C29739TCT33AY.39.10.000119
noncoding29739C29739-C-33AY.39.10.000119
noncoding29739C29739-C-33AY.400.002893
noncoding29739C29739-C-33AY.5.30.001012
noncoding29739C29739-C-33AY.510.002727
noncoding29739C29739GCG33AY.60.000123
noncoding29739C29739TCT33AY.60.000123
noncoding29739C29739-C-33AY.620.001307
noncoding29739C29739-C-33AY.70.000588
noncoding29739C29739TCT33AY.750.000168
noncoding29739C29739-C-33AY.9.10.000251
noncoding29739C29739GCG33B.10.000027
noncoding29739C29739ACA33B.10.000027
noncoding29739C29739GCG33B.1.10.000054
noncoding29739C29739-C-33B.1.1.1350.014085
noncoding29739C29739-C-33B.1.1.1920.006928
noncoding29739C29739TCT33B.1.1.2070.003546
noncoding29739C29739TCT33B.1.1.2160.002671
noncoding29739C29739-C-33B.1.1.2280.009146
noncoding29739C29739-C-33B.1.1.2360.02069
noncoding29739C29739-C-33B.1.1.2770.002276
noncoding29739C29739-C-33B.1.1.2840.000322
noncoding29739C29739-C-33B.1.1.3750.035714
noncoding29739C29739-C-33B.1.1.4010.2
noncoding29739C29739-C-33B.1.1.4280.028302
noncoding29739C29739-C-33B.1.1.5180.018987
noncoding29739C29739-C-33B.1.1.570.034483
noncoding29739C29739-C-33B.1.1.700.001023
noncoding29739C29739-C-33B.1.1450.157895
noncoding29739C29739-C-33B.1.177.210.000229
noncoding29739C29739-C-33B.1.177.370.081081
noncoding29739C29739-C-33B.1.177.440.001557
noncoding29739C29739-C-33B.1.2060.002447
noncoding29739C29739-C-33B.1.2290.029126
noncoding29739C29739-C-33B.1.258.210.023256
noncoding29739C29739-C-33B.1.3490.002144
noncoding29739C29739-C-33B.1.36.160.004274
noncoding29739C29739-C-33B.1.36.170.001482
noncoding29739C29739-C-33B.1.36.310.005254
noncoding29739C29739-C-33B.1.3690.000856
noncoding29739C29739TCT33B.1.3690.000856
noncoding29739C29739-C-33B.1.3960.002117
noncoding29739C29739-C-33B.1.4090.002344
noncoding29739C29739TCT33B.1.4160.003807
noncoding29739C29739GCG33B.1.4290.000071
noncoding29739C29739-C-33B.1.440.025
noncoding29739C29739-C-33B.1.4410.028846
noncoding29739C29739-C-33B.1.5050.013158
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