CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29738

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
noncoding	29738	C29738-		noncoding	C	-	33151	33151	1	29738-29738
noncoding	29738	C29738A		noncoding	C	A	17066	17066	1	29738-29738
noncoding	29738	C29738T		noncoding	C	T	15142	15142	1	29738-29738
noncoding	29738	C29738G		noncoding	C	G	423	423	1	29738-29738
noncoding	29738	C29738V		noncoding	C	V	2	2	1	29738-29738
noncoding	29738	C29738R		noncoding	C	R	1	1	1	29738-29738
noncoding	29738	C29738W		noncoding	C	W	1	1	1	29738-29738
noncoding	29738	C29738H		noncoding	C	H	1	1	1	29738-29738

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
noncoding	29738	C29738-	C	-	33151	33151	All	0.006341
noncoding	29738	C29738A	C	A	17066	17066	All	0.003264
noncoding	29738	C29738T	C	T	15142	15142	All	0.002896
noncoding	29738	C29738A	C	A	14188	14188	AY.75	0.794846
noncoding	29738	C29738-	C	-	9377	9377	B.1.526	0.220402
noncoding	29738	C29738T	C	T	6076	6076	AY.36	0.900548
noncoding	29738	C29738-	C	-	5089	5089	B.1.1.7	0.004556
noncoding	29738	C29738-	C	-	3716	3716	B.1.525	0.420505
noncoding	29738	C29738-	C	-	1958	1958	AY.4	0.003047
noncoding	29738	C29738-	C	-	1762	1762	B.1.1.311	0.631089
noncoding	29738	C29738T	C	T	1530	1530	AY.4	0.002381
noncoding	29738	C29738A	C	A	1339	1339	B.1.526	0.031473
noncoding	29738	C29738T	C	T	1225	1225	B.1.1.7	0.001097
noncoding	29738	C29738-	C	-	832	832	AY.38	0.415377
noncoding	29738	C29738T	C	T	806	806	B.1	0.007383
noncoding	29738	C29738T	C	T	804	804	B.1.617.2	0.003027
noncoding	29738	C29738A	C	A	785	785	B.1.617.2	0.002956
noncoding	29738	C29738T	C	T	555	555	AY.39	0.013715
noncoding	29738	C29738-	C	-	545	545	B.1.429	0.012823
noncoding	29738	C29738-	C	-	524	524	B.1.617.2	0.001973
noncoding	29738	C29738G	C	G	423	423	All	0.000081
noncoding	29738	C29738-	C	-	393	393	B.1.177	0.005175
noncoding	29738	C29738-	C	-	387	387	B.1	0.003545
noncoding	29738	C29738-	C	-	373	373	B.1.177.81	0.070617
noncoding	29738	C29738-	C	-	365	365	B.1.351.2	0.110439
noncoding	29738	C29738T	C	T	354	354	AY.102	0.009386
noncoding	29738	C29738-	C	-	354	354	B.1.497	0.111426
noncoding	29738	C29738-	C	-	338	338	B.1.2	0.002976
noncoding	29738	C29738T	C	T	318	318	AY.43	0.001409
noncoding	29738	C29738-	C	-	305	305	P.1	0.004805
noncoding	29738	C29738-	C	-	304	304	AY.39	0.007512
noncoding	29738	C29738-	C	-	286	286	AY.5	0.005906
noncoding	29738	C29738-	C	-	286	286	B.1.258.11	0.113357
noncoding	29738	C29738-	C	-	276	276	AY.25	0.00166
noncoding	29738	C29738G	C	G	276	276	AY.4	0.00043
noncoding	29738	C29738T	C	T	256	256	AY.103	0.00159
noncoding	29738	C29738T	C	T	236	236	B.1.2	0.002078
noncoding	29738	C29738-	C	-	217	217	B.1.221	0.015414
noncoding	29738	C29738-	C	-	206	206	B.1.1	0.003737
noncoding	29738	C29738T	C	T	200	200	B.1.243	0.013917
noncoding	29738	C29738-	C	-	199	199	B.1.160	0.006206
noncoding	29738	C29738-	C	-	185	185	AY.103	0.001149
noncoding	29738	C29738T	C	T	177	177	AY.44	0.001077
noncoding	29738	C29738-	C	-	175	175	B.1.351	0.005202
noncoding	29738	C29738-	C	-	158	158	B.1.626	0.902857
noncoding	29738	C29738-	C	-	154	154	B.1.621	0.013632
noncoding	29738	C29738-	C	-	152	152	AY.43	0.000673
noncoding	29738	C29738-	C	-	145	145	AY.46.6	0.01047
noncoding	29738	C29738-	C	-	144	144	D.5	0.716418
noncoding	29738	C29738T	C	T	143	143	AY.25	0.00086
noncoding	29738	C29738-	C	-	137	137	B.1.427	0.006918
noncoding	29738	C29738T	C	T	132	132	B.1.258	0.008784
noncoding	29738	C29738A	C	A	128	128	B.1.1.7	0.000115
noncoding	29738	C29738-	C	-	113	113	AY.120	0.004201
noncoding	29738	C29738-	C	-	110	110	B.1.258	0.00732
noncoding	29738	C29738-	C	-	108	108	AY.44	0.000657
noncoding	29738	C29738-	C	-	105	105	B.1.1.519	0.00417
noncoding	29738	C29738-	C	-	104	104	B.1.1.294	0.131646
noncoding	29738	C29738-	C	-	102	102	AY.42	0.004103
noncoding	29738	C29738T	C	T	98	98	B.1.177	0.00129
noncoding	29738	C29738-	C	-	97	97	AY.47	0.003017
noncoding	29738	C29738-	C	-	96	96	AY.73	0.063872
noncoding	29738	C29738-	C	-	89	89	AY.3	0.000885
noncoding	29738	C29738T	C	T	86	86	AY.26	0.002435
noncoding	29738	C29738T	C	T	84	84	B.1.427	0.004242
noncoding	29738	C29738T	C	T	83	83	AY.3	0.000826
noncoding	29738	C29738T	C	T	83	83	P.1	0.001308
noncoding	29738	C29738-	C	-	80	80	B.1.243	0.005567
noncoding	29738	C29738T	C	T	74	74	AY.93	0.020208
noncoding	29738	C29738A	C	A	70	70	B.1.2	0.000616
noncoding	29738	C29738-	C	-	67	67	B.1.596	0.005838
noncoding	29738	C29738T	C	T	66	66	AY.20	0.002565
noncoding	29738	C29738-	C	-	65	65	B.1.561	0.025804
noncoding	29738	C29738T	C	T	59	59	B.1.1.39	0.030071
noncoding	29738	C29738T	C	T	57	57	AY.98.1	0.002761
noncoding	29738	C29738T	C	T	53	53	B.1.311	0.014552
noncoding	29738	C29738-	C	-	53	53	D.2	0.003977
noncoding	29738	C29738T	C	T	52	52	AY.4.2	0.001128
noncoding	29738	C29738A	C	A	49	49	AY.44	0.000298
noncoding	29738	C29738T	C	T	49	49	B.1.36	0.007149
noncoding	29738	C29738-	C	-	48	48	C.16	0.050901
noncoding	29738	C29738A	C	A	47	47	AY.110	0.005296
noncoding	29738	C29738-	C	-	47	47	AY.20	0.001827
noncoding	29738	C29738-	C	-	44	44	B.1.177.24	0.056995
noncoding	29738	C29738-	C	-	44	44	P.1.14	0.002103
noncoding	29738	C29738-	C	-	43	43	B.1.177.60	0.009393
noncoding	29738	C29738-	C	-	43	43	R.1	0.00387
noncoding	29738	C29738T	C	T	42	42	B.1.177.16	0.027907
noncoding	29738	C29738-	C	-	41	41	AY.102	0.001087
noncoding	29738	C29738-	C	-	41	41	P.1.16	0.015339
noncoding	29738	C29738-	C	-	38	38	M.1	0.883721
noncoding	29738	C29738A	C	A	37	37	AY.25	0.000223
noncoding	29738	C29738-	C	-	37	37	B.1.637	0.002704
noncoding	29738	C29738A	C	A	36	36	AY.103	0.000224
noncoding	29738	C29738T	C	T	36	36	B.1.1	0.000653
noncoding	29738	C29738-	C	-	35	35	AY.26	0.000991
noncoding	29738	C29738-	C	-	35	35	AY.29	0.000552
noncoding	29738	C29738A	C	A	35	35	B.1.427	0.001767
noncoding	29738	C29738-	C	-	34	34	AY.119	0.0012
noncoding	29738	C29738T	C	T	33	33	AY.100	0.001518
noncoding	29738	C29738A	C	A	33	33	AY.4	0.000051
noncoding	29738	C29738-	C	-	33	33	B.1.258.17	0.003431
noncoding	29738	C29738T	C	T	32	32	B.1.576	0.029012
noncoding	29738	C29738-	C	-	32	32	B.1.595	0.008351
noncoding	29738	C29738T	C	T	31	31	AY.91	0.022644
noncoding	29738	C29738-	C	-	31	31	B.1.1.434	0.010805
noncoding	29738	C29738T	C	T	30	30	B.1.160	0.000936
noncoding	29738	C29738-	C	-	29	29	AY.100	0.001334
noncoding	29738	C29738-	C	-	29	29	AY.4.2	0.000629
noncoding	29738	C29738T	C	T	29	29	B.1.1.214	0.001608
noncoding	29738	C29738G	C	G	29	29	B.1.177	0.000382
noncoding	29738	C29738-	C	-	29	29	B.1.619	0.025261
noncoding	29738	C29738T	C	T	28	28	B.1.177.55	0.065268
noncoding	29738	C29738T	C	T	28	28	B.1.36.1	0.031927
noncoding	29738	C29738-	C	-	28	28	B.1.623	0.015021
noncoding	29738	C29738-	C	-	27	27	B.1.1.37	0.005207
noncoding	29738	C29738-	C	-	27	27	B.1.346	0.035387
noncoding	29738	C29738T	C	T	26	26	AY.119	0.000918
noncoding	29738	C29738T	C	T	26	26	AY.23	0.001813
noncoding	29738	C29738-	C	-	26	26	AY.6	0.001069
noncoding	29738	C29738A	C	A	26	26	AY.93	0.0071
noncoding	29738	C29738A	C	A	25	25	AY.3	0.000249
noncoding	29738	C29738A	C	A	25	25	AY.75.1	0.004508
noncoding	29738	C29738-	C	-	24	24	B.1.1.63	0.009259
noncoding	29738	C29738T	C	T	24	24	Q.2	0.014724
noncoding	29738	C29738T	C	T	23	23	AY.5	0.000475
noncoding	29738	C29738T	C	T	23	23	B.1.351	0.000684
noncoding	29738	C29738T	C	T	23	23	B.1.429	0.000541
noncoding	29738	C29738-	C	-	23	23	C.37	0.002669
noncoding	29738	C29738T	C	T	22	22	AY.47	0.000684
noncoding	29738	C29738-	C	-	22	22	B.1.1.368	0.067901
noncoding	29738	C29738T	C	T	22	22	B.1.609	0.010547
noncoding	29738	C29738T	C	T	21	21	AY.46	0.002186
noncoding	29738	C29738-	C	-	21	21	B.1.1.222	0.004284
noncoding	29738	C29738-	C	-	21	21	B.1.1.265	0.066246
noncoding	29738	C29738-	C	-	21	21	B.1.1.39	0.010703
noncoding	29738	C29738-	C	-	21	21	B.1.240	0.004527
noncoding	29738	C29738-	C	-	21	21	B.1.305	0.045161
noncoding	29738	C29738-	C	-	21	21	B.1.404	0.027344
noncoding	29738	C29738-	C	-	20	20	B.1.289	0.053191
noncoding	29738	C29738-	C	-	20	20	B.1.576	0.018132
noncoding	29738	C29738-	C	-	20	20	B.1.588	0.018198
noncoding	29738	C29738T	C	T	19	19	AY.111	0.00348
noncoding	29738	C29738-	C	-	19	19	AY.92	0.005458
noncoding	29738	C29738A	C	A	18	18	AY.118	0.001128
noncoding	29738	C29738-	C	-	18	18	AY.45	0.00219
noncoding	29738	C29738T	C	T	18	18	AY.45	0.00219
noncoding	29738	C29738-	C	-	18	18	B.1.1.172	0.327273
noncoding	29738	C29738-	C	-	18	18	B.1.1.307	0.04557
noncoding	29738	C29738-	C	-	18	18	B.1.556	0.135338
noncoding	29738	C29738-	C	-	18	18	B.1.575	0.005461
noncoding	29738	C29738-	C	-	18	18	P.2	0.003359
noncoding	29738	C29738-	C	-	17	17	AY.118	0.001065
noncoding	29738	C29738T	C	T	17	17	AY.29	0.000268
noncoding	29738	C29738-	C	-	17	17	B.1.1.214	0.000943
noncoding	29738	C29738-	C	-	17	17	B.1.1.28	0.005291
noncoding	29738	C29738-	C	-	17	17	B.1.1.33	0.007155
noncoding	29738	C29738-	C	-	17	17	B.1.241	0.013799
noncoding	29738	C29738-	C	-	17	17	B.1.311	0.004668
noncoding	29738	C29738-	C	-	17	17	B.1.562	0.314815
noncoding	29738	C29738T	C	T	16	16	AY.117	0.001352
noncoding	29738	C29738T	C	T	16	16	AY.118	0.001002
noncoding	29738	C29738T	C	T	16	16	AY.120	0.000595
noncoding	29738	C29738T	C	T	16	16	AY.61	0.001676
noncoding	29738	C29738-	C	-	16	16	B.1.1.174	0.054054
noncoding	29738	C29738T	C	T	16	16	B.1.1.519	0.000635
noncoding	29738	C29738-	C	-	16	16	B.1.177.86	0.002935
noncoding	29738	C29738-	C	-	16	16	B.1.258.14	0.015686
noncoding	29738	C29738-	C	-	16	16	B.1.36.29	0.008277
noncoding	29738	C29738G	C	G	16	16	B.1.617.2	0.00006
noncoding	29738	C29738T	C	T	16	16	R.1	0.00144
noncoding	29738	C29738T	C	T	15	15	AY.34	0.001454
noncoding	29738	C29738T	C	T	15	15	AY.42	0.000603
noncoding	29738	C29738A	C	A	15	15	AY.62	0.006536
noncoding	29738	C29738T	C	T	15	15	B.1.240	0.003233
noncoding	29738	C29738-	C	-	15	15	B.1.36.1	0.017104
noncoding	29738	C29738-	C	-	15	15	B.1.36.18	0.006303
noncoding	29738	C29738-	C	-	14	14	AY.61	0.001467
noncoding	29738	C29738-	C	-	14	14	AY.75.1	0.002524
noncoding	29738	C29738G	C	G	14	14	B.1	0.000128
noncoding	29738	C29738-	C	-	14	14	B.1.177.7	0.002308
noncoding	29738	C29738T	C	T	14	14	B.1.525	0.001584
noncoding	29738	C29738-	C	-	14	14	B.1.581	0.132075
noncoding	29738	C29738T	C	T	14	14	B.1.621	0.001239
noncoding	29738	C29738A	C	A	13	13	AY.111	0.002381
noncoding	29738	C29738-	C	-	13	13	AY.74	0.001503
noncoding	29738	C29738-	C	-	13	13	AY.98.1	0.00063
noncoding	29738	C29738A	C	A	13	13	B.1	0.000119
noncoding	29738	C29738-	C	-	13	13	B.1.1.25	0.007391
noncoding	29738	C29738-	C	-	13	13	B.1.1.306	0.005699
noncoding	29738	C29738T	C	T	13	13	B.1.177.81	0.002461
noncoding	29738	C29738T	C	T	12	12	AY.116	0.003441
noncoding	29738	C29738T	C	T	12	12	AY.69	0.00224
noncoding	29738	C29738-	C	-	12	12	B.1.1.416	0.01086
noncoding	29738	C29738-	C	-	12	12	B.1.36	0.001751
noncoding	29738	C29738-	C	-	12	12	B.1.416	0.015228
noncoding	29738	C29738T	C	T	12	12	B.1.526	0.000282
noncoding	29738	C29738-	C	-	11	11	A.1	0.0031
noncoding	29738	C29738-	C	-	11	11	AY.117	0.00093
noncoding	29738	C29738T	C	T	11	11	AY.33	0.000735
noncoding	29738	C29738-	C	-	11	11	AY.75	0.000616
noncoding	29738	C29738-	C	-	11	11	AY.9	0.000744
noncoding	29738	C29738-	C	-	11	11	AY.9.2	0.000404
noncoding	29738	C29738-	C	-	11	11	B.1.1.317	0.004529
noncoding	29738	C29738-	C	-	11	11	B.1.177.62	0.013111
noncoding	29738	C29738-	C	-	11	11	B.1.177.75	0.011446
noncoding	29738	C29738-	C	-	11	11	B.1.234	0.001451
noncoding	29738	C29738-	C	-	11	11	P.1.15	0.002556
noncoding	29738	C29738A	C	A	10	10	AY.100	0.00046
noncoding	29738	C29738-	C	-	10	10	AY.114	0.002311
noncoding	29738	C29738-	C	-	10	10	AY.23	0.000697
noncoding	29738	C29738A	C	A	10	10	AY.26	0.000283
noncoding	29738	C29738-	C	-	10	10	AY.46.4	0.001645
noncoding	29738	C29738-	C	-	10	10	B	0.001278
noncoding	29738	C29738-	C	-	10	10	B.1.1.397	0.022523
noncoding	29738	C29738-	C	-	10	10	B.1.400	0.00429
noncoding	29738	C29738-	C	-	10	10	P.1.4	0.009766
noncoding	29738	C29738T	C	T	9	9	A.2.5	0.004491
noncoding	29738	C29738-	C	-	9	9	AY.12	0.002845
noncoding	29738	C29738-	C	-	9	9	AY.2	0.003205
noncoding	29738	C29738-	C	-	9	9	AY.34.1	0.004589
noncoding	29738	C29738A	C	A	9	9	AY.39	0.000222
noncoding	29738	C29738-	C	-	9	9	AY.46	0.000937
noncoding	29738	C29738-	C	-	9	9	AY.46.5	0.001786
noncoding	29738	C29738T	C	T	9	9	AY.60	0.008443
noncoding	29738	C29738T	C	T	9	9	AY.75	0.000504
noncoding	29738	C29738T	C	T	9	9	B.1.1.50	0.00611
noncoding	29738	C29738-	C	-	9	9	B.1.149	0.030822
noncoding	29738	C29738-	C	-	9	9	B.1.160.14	0.019068
noncoding	29738	C29738-	C	-	9	9	B.1.177.50	0.042254
noncoding	29738	C29738-	C	-	9	9	B.1.258.3	0.015075
noncoding	29738	C29738T	C	T	9	9	B.1.336	0.021951
noncoding	29738	C29738-	C	-	9	9	B.1.398	0.026786
noncoding	29738	C29738-	C	-	9	9	B.1.422	0.007311
noncoding	29738	C29738T	C	T	9	9	B.1.433	0.028754
noncoding	29738	C29738-	C	-	9	9	P.1.7	0.002874
noncoding	29738	C29738G	C	G	8	8	AY.102	0.000212
noncoding	29738	C29738A	C	A	8	8	AY.119	0.000282
noncoding	29738	C29738T	C	T	8	8	AY.121	0.001083
noncoding	29738	C29738T	C	T	8	8	AY.24	0.003448
noncoding	29738	C29738-	C	-	8	8	AY.34	0.000776
noncoding	29738	C29738T	C	T	8	8	AY.5.3	0.002699
noncoding	29738	C29738-	C	-	8	8	AY.54	0.000763
noncoding	29738	C29738T	C	T	8	8	AY.72	0.010884
noncoding	29738	C29738T	C	T	8	8	AY.78	0.012327
noncoding	29738	C29738-	C	-	8	8	AY.99.2	0.000737
noncoding	29738	C29738T	C	T	8	8	AY.99.2	0.000737
noncoding	29738	C29738-	C	-	8	8	B.1.1.153	0.008762
noncoding	29738	C29738A	C	A	8	8	B.1.1.301	0.009434
noncoding	29738	C29738-	C	-	8	8	B.1.1.316	0.007401
noncoding	29738	C29738G	C	G	8	8	B.1.1.7	0.000007
noncoding	29738	C29738T	C	T	8	8	B.1.199	0.033058
noncoding	29738	C29738-	C	-	8	8	B.1.36.22	0.009662
noncoding	29738	C29738-	C	-	8	8	B.1.466.2	0.00313
noncoding	29738	C29738T	C	T	8	8	B.1.574	0.017204
noncoding	29738	C29738T	C	T	8	8	B.1.596	0.000697
noncoding	29738	C29738-	C	-	8	8	B.1.93	0.00747
noncoding	29738	C29738-	C	-	8	8	C.36.3	0.004538
noncoding	29738	C29738-	C	-	8	8	P.1.1	0.002541
noncoding	29738	C29738-	C	-	8	8	Q.4	0.003638
noncoding	29738	C29738T	C	T	7	7	AY.107	0.003262
noncoding	29738	C29738T	C	T	7	7	AY.109	0.005178
noncoding	29738	C29738-	C	-	7	7	AY.13	0.001127
noncoding	29738	C29738T	C	T	7	7	AY.14	0.000616
noncoding	29738	C29738T	C	T	7	7	AY.39.1	0.000277
noncoding	29738	C29738T	C	T	7	7	AY.46.6	0.000505
noncoding	29738	C29738T	C	T	7	7	AY.75.1	0.001262
noncoding	29738	C29738G	C	G	7	7	AY.75.1	0.001262
noncoding	29738	C29738-	C	-	7	7	AY.85	0.00299
noncoding	29738	C29738T	C	T	7	7	AY.9.2	0.000257
noncoding	29738	C29738T	C	T	7	7	AY.92	0.002011
noncoding	29738	C29738T	C	T	7	7	B.1.1.37	0.00135
noncoding	29738	C29738-	C	-	7	7	B.1.1.526	0.024823
noncoding	29738	C29738-	C	-	7	7	B.1.160.33	0.030973
noncoding	29738	C29738T	C	T	7	7	B.1.177.4	0.001477
noncoding	29738	C29738T	C	T	7	7	B.1.221	0.000497
noncoding	29738	C29738A	C	A	7	7	B.1.221	0.000497
noncoding	29738	C29738-	C	-	7	7	B.1.399	0.01354
noncoding	29738	C29738T	C	T	7	7	C.37	0.000812
noncoding	29738	C29738T	C	T	7	7	Q.8	0.001154
noncoding	29738	C29738-	C	-	6	6	A	0.002322
noncoding	29738	C29738-	C	-	6	6	AY.14	0.000528
noncoding	29738	C29738A	C	A	6	6	AY.3.1	0.000512
noncoding	29738	C29738T	C	T	6	6	AY.30	0.002374
noncoding	29738	C29738-	C	-	6	6	AY.33	0.000401
noncoding	29738	C29738-	C	-	6	6	AY.35	0.001398
noncoding	29738	C29738A	C	A	6	6	AY.43	0.000027
noncoding	29738	C29738T	C	T	6	6	AY.54	0.000572
noncoding	29738	C29738T	C	T	6	6	AY.64	0.003571
noncoding	29738	C29738A	C	A	6	6	AY.65	0.003198
noncoding	29738	C29738-	C	-	6	6	AY.65	0.003198
noncoding	29738	C29738T	C	T	6	6	AY.9	0.000406
noncoding	29738	C29738T	C	T	6	6	B.1.1.222	0.001224
noncoding	29738	C29738-	C	-	6	6	B.1.1.318	0.001811
noncoding	29738	C29738T	C	T	6	6	B.1.1.326	0.010563
noncoding	29738	C29738-	C	-	6	6	B.1.110.3	0.00431
noncoding	29738	C29738-	C	-	6	6	B.1.389	0.006012
noncoding	29738	C29738T	C	T	6	6	B.1.408	0.02214
noncoding	29738	C29738T	C	T	6	6	B.1.470	0.008427
noncoding	29738	C29738-	C	-	6	6	B.1.609	0.002876
noncoding	29738	C29738-	C	-	6	6	B.39	0.013986
noncoding	29738	C29738-	C	-	6	6	B.40	0.002186
noncoding	29738	C29738-	C	-	6	6	N.4	0.025532
noncoding	29738	C29738-	C	-	6	6	N.5	0.010601
noncoding	29738	C29738T	C	T	6	6	P.1.14	0.000287
noncoding	29738	C29738T	C	T	6	6	P.1.7	0.001916
noncoding	29738	C29738-	C	-	6	6	Q.2	0.003681
noncoding	29738	C29738T	C	T	5	5	AY.106	0.001674
noncoding	29738	C29738-	C	-	5	5	AY.36	0.000741
noncoding	29738	C29738T	C	T	5	5	AY.46.4	0.000823
noncoding	29738	C29738A	C	A	5	5	AY.54	0.000477
noncoding	29738	C29738T	C	T	5	5	AY.59	0.002648
noncoding	29738	C29738G	C	G	5	5	AY.6	0.000206
noncoding	29738	C29738T	C	T	5	5	AY.65	0.002665
noncoding	29738	C29738T	C	T	5	5	AY.9.1	0.000419
noncoding	29738	C29738A	C	A	5	5	AY.91	0.003652
noncoding	29738	C29738T	C	T	5	5	AY.94	0.002213
noncoding	29738	C29738T	C	T	5	5	AY.98	0.000395
noncoding	29738	C29738T	C	T	5	5	AY.99	0.005247
noncoding	29738	C29738-	C	-	5	5	B.1.1.189	0.007564
noncoding	29738	C29738-	C	-	5	5	B.1.1.198	0.007342
noncoding	29738	C29738-	C	-	5	5	B.1.1.288	0.009579
noncoding	29738	C29738-	C	-	5	5	B.1.1.369	0.002231
noncoding	29738	C29738T	C	T	5	5	B.1.139	0.003666
noncoding	29738	C29738T	C	T	5	5	B.1.177.21	0.000382
noncoding	29738	C29738-	C	-	5	5	B.1.177.32	0.006748
noncoding	29738	C29738T	C	T	5	5	B.1.177.7	0.000824
noncoding	29738	C29738T	C	T	5	5	B.1.177.73	0.002831
noncoding	29738	C29738-	C	-	5	5	B.1.177.73	0.002831
noncoding	29738	C29738-	C	-	5	5	B.1.177.87	0.003639
noncoding	29738	C29738-	C	-	5	5	B.1.210	0.010661
noncoding	29738	C29738T	C	T	5	5	B.1.234	0.00066
noncoding	29738	C29738T	C	T	5	5	B.1.258.5	0.04386
noncoding	29738	C29738-	C	-	5	5	B.1.279	0.002568
noncoding	29738	C29738-	C	-	5	5	B.1.416.1	0.007812
noncoding	29738	C29738T	C	T	5	5	B.1.466.2	0.001956
noncoding	29738	C29738T	C	T	5	5	B.1.469	0.018051
noncoding	29738	C29738T	C	T	5	5	B.1.617.1	0.000645
noncoding	29738	C29738A	C	A	5	5	B.1.637	0.000365
noncoding	29738	C29738-	C	-	5	5	P.1.17	0.000809
noncoding	29738	C29738-	C	-	5	5	P.5	0.068493
noncoding	29738	C29738-	C	-	4	4	A.2.5	0.001996
noncoding	29738	C29738-	C	-	4	4	AY.109	0.002959
noncoding	29738	C29738T	C	T	4	4	AY.116.1	0.001246
noncoding	29738	C29738T	C	T	4	4	AY.21	0.00759
noncoding	29738	C29738-	C	-	4	4	AY.30	0.001583
noncoding	29738	C29738T	C	T	4	4	AY.34.1	0.00204
noncoding	29738	C29738T	C	T	4	4	AY.4.5	0.00043
noncoding	29738	C29738A	C	A	4	4	AY.47	0.000124
noncoding	29738	C29738T	C	T	4	4	AY.55	0.00367
noncoding	29738	C29738-	C	-	4	4	AY.59	0.002119
noncoding	29738	C29738T	C	T	4	4	AY.6	0.000165
noncoding	29738	C29738T	C	T	4	4	AY.68	0.001095
noncoding	29738	C29738-	C	-	4	4	AY.84	0.00175
noncoding	29738	C29738G	C	G	4	4	AY.9	0.00027
noncoding	29738	C29738G	C	G	4	4	AY.9.2	0.000147
noncoding	29738	C29738G	C	G	4	4	AY.98	0.000316
noncoding	29738	C29738A	C	A	4	4	B.1.1	0.000073
noncoding	29738	C29738-	C	-	4	4	B.1.1.1	0.001307
noncoding	29738	C29738-	C	-	4	4	B.1.1.312	0.007648
noncoding	29738	C29738-	C	-	4	4	B.1.1.337	0.014388
noncoding	29738	C29738-	C	-	4	4	B.1.1.385	0.017857
noncoding	29738	C29738-	C	-	4	4	B.1.1.41	0.025316
noncoding	29738	C29738-	C	-	4	4	B.1.1.46	0.017467
noncoding	29738	C29738-	C	-	4	4	B.1.1.464	0.005891
noncoding	29738	C29738T	C	T	4	4	B.1.117	0.05
noncoding	29738	C29738T	C	T	4	4	B.1.149	0.013699
noncoding	29738	C29738-	C	-	4	4	B.1.177.12	0.000607
noncoding	29738	C29738-	C	-	4	4	B.1.177.18	0.00464
noncoding	29738	C29738-	C	-	4	4	B.1.177.42	0.003578
noncoding	29738	C29738-	C	-	4	4	B.1.177.56	0.00267
noncoding	29738	C29738T	C	T	4	4	B.1.177.63	0.010811
noncoding	29738	C29738T	C	T	4	4	B.1.214.4	0.036364
noncoding	29738	C29738-	C	-	4	4	B.1.351.3	0.003506
noncoding	29738	C29738T	C	T	4	4	B.1.428	0.004082
noncoding	29738	C29738A	C	A	4	4	B.1.429	0.000094
noncoding	29738	C29738-	C	-	4	4	B.1.438.1	0.000429
noncoding	29738	C29738-	C	-	4	4	B.1.469	0.01444
noncoding	29738	C29738A	C	A	4	4	B.1.497	0.001259
noncoding	29738	C29738T	C	T	4	4	B.1.564	0.001704
noncoding	29738	C29738-	C	-	4	4	B.1.568	0.004444
noncoding	29738	C29738T	C	T	4	4	B.1.577	0.002749
noncoding	29738	C29738-	C	-	4	4	B.1.582	0.001963
noncoding	29738	C29738-	C	-	4	4	P.1.12	0.001936
noncoding	29738	C29738-	C	-	4	4	Q.1	0.000505
noncoding	29738	C29738A	C	A	4	4	R.1	0.00036
noncoding	29738	C29738T	C	T	3	3	AD.2	0.000657
noncoding	29738	C29738A	C	A	3	3	AY.102	0.00008
noncoding	29738	C29738T	C	T	3	3	AY.105	0.001929
noncoding	29738	C29738-	C	-	3	3	AY.110	0.000338
noncoding	29738	C29738G	C	G	3	3	AY.111	0.000549
noncoding	29738	C29738A	C	A	3	3	AY.117	0.000254
noncoding	29738	C29738G	C	G	3	3	AY.120	0.000112
noncoding	29738	C29738A	C	A	3	3	AY.13	0.000483
noncoding	29738	C29738T	C	T	3	3	AY.16	0.001139
noncoding	29738	C29738T	C	T	3	3	AY.22	0.006276
noncoding	29738	C29738-	C	-	3	3	AY.27	0.000194
noncoding	29738	C29738-	C	-	3	3	AY.3.1	0.000256
noncoding	29738	C29738-	C	-	3	3	AY.32	0.001597
noncoding	29738	C29738-	C	-	3	3	AY.39.1	0.000119
noncoding	29738	C29738-	C	-	3	3	AY.40	0.002893
noncoding	29738	C29738G	C	G	3	3	AY.43	0.000013
noncoding	29738	C29738-	C	-	3	3	AY.5.3	0.001012
noncoding	29738	C29738-	C	-	3	3	AY.51	0.002727
noncoding	29738	C29738-	C	-	3	3	AY.62	0.001307
noncoding	29738	C29738-	C	-	3	3	AY.7	0.000588
noncoding	29738	C29738T	C	T	3	3	AY.74	0.000347
noncoding	29738	C29738T	C	T	3	3	AY.84	0.001312
noncoding	29738	C29738T	C	T	3	3	AY.88	0.002653
noncoding	29738	C29738-	C	-	3	3	AY.9.1	0.000251
noncoding	29738	C29738T	C	T	3	3	B.1.1.1	0.00098
noncoding	29738	C29738-	C	-	3	3	B.1.1.135	0.014085
noncoding	29738	C29738-	C	-	3	3	B.1.1.192	0.006928
noncoding	29738	C29738-	C	-	3	3	B.1.1.228	0.009146
noncoding	29738	C29738-	C	-	3	3	B.1.1.236	0.02069
noncoding	29738	C29738T	C	T	3	3	B.1.1.25	0.001706
noncoding	29738	C29738T	C	T	3	3	B.1.1.253	0.007519
noncoding	29738	C29738-	C	-	3	3	B.1.1.277	0.002276
noncoding	29738	C29738T	C	T	3	3	B.1.1.28	0.000934
noncoding	29738	C29738T	C	T	3	3	B.1.1.33	0.001263
noncoding	29738	C29738-	C	-	3	3	B.1.1.375	0.035714
noncoding	29738	C29738-	C	-	3	3	B.1.1.401	0.2
noncoding	29738	C29738-	C	-	3	3	B.1.1.428	0.028302
noncoding	29738	C29738T	C	T	3	3	B.1.1.434	0.001046
noncoding	29738	C29738-	C	-	3	3	B.1.1.518	0.018987
noncoding	29738	C29738T	C	T	3	3	B.1.1.523	0.004687
noncoding	29738	C29738-	C	-	3	3	B.1.1.57	0.034483
noncoding	29738	C29738-	C	-	3	3	B.1.1.70	0.001023
noncoding	29738	C29738T	C	T	3	3	B.1.111	0.003525
noncoding	29738	C29738-	C	-	3	3	B.1.145	0.157895
noncoding	29738	C29738T	C	T	3	3	B.1.170	0.012931
noncoding	29738	C29738-	C	-	3	3	B.1.177.21	0.000229
noncoding	29738	C29738-	C	-	3	3	B.1.177.37	0.081081
noncoding	29738	C29738-	C	-	3	3	B.1.177.44	0.001557
noncoding	29738	C29738-	C	-	3	3	B.1.206	0.002447
noncoding	29738	C29738-	C	-	3	3	B.1.229	0.029126
noncoding	29738	C29738-	C	-	3	3	B.1.258.21	0.023256
noncoding	29738	C29738-	C	-	3	3	B.1.349	0.002144
noncoding	29738	C29738-	C	-	3	3	B.1.36.16	0.004274
noncoding	29738	C29738-	C	-	3	3	B.1.36.17	0.001482
noncoding	29738	C29738-	C	-	3	3	B.1.36.31	0.005254
noncoding	29738	C29738T	C	T	3	3	B.1.36.38	0.004926
noncoding	29738	C29738-	C	-	3	3	B.1.369	0.000856
noncoding	29738	C29738-	C	-	3	3	B.1.396	0.002117
noncoding	29738	C29738T	C	T	3	3	B.1.400	0.001287
noncoding	29738	C29738-	C	-	3	3	B.1.409	0.002344
noncoding	29738	C29738-	C	-	3	3	B.1.44	0.025
noncoding	29738	C29738-	C	-	3	3	B.1.441	0.028846
noncoding	29738	C29738T	C	T	3	3	B.1.471	0.008197
noncoding	29738	C29738-	C	-	3	3	B.1.505	0.013158
noncoding	29738	C29738-	C	-	3	3	B.1.517	0.001281
noncoding	29738	C29738G	C	G	3	3	B.1.525	0.000339
noncoding	29738	C29738-	C	-	3	3	B.1.560	0.013889
noncoding	29738	C29738A	C	A	3	3	B.1.562	0.055556
noncoding	29738	C29738-	C	-	3	3	B.1.577	0.002062
noncoding	29738	C29738-	C	-	3	3	B.1.590	0.013636
noncoding	29738	C29738T	C	T	3	3	B.1.595	0.000783
noncoding	29738	C29738A	C	A	3	3	B.1.595	0.000783
noncoding	29738	C29738-	C	-	3	3	B.1.627	0.006061
noncoding	29738	C29738T	C	T	3	3	B.1.628	0.001057
noncoding	29738	C29738T	C	T	3	3	D.2	0.000225
noncoding	29738	C29738T	C	T	3	3	N.4	0.012766
noncoding	29738	C29738-	C	-	3	3	P.1.10	0.000808
noncoding	29738	C29738-	C	-	2	2	A.2.3	0.009479
noncoding	29738	C29738-	C	-	2	2	AA.1	0.014493
noncoding	29738	C29738-	C	-	2	2	AD.2	0.000438
noncoding	29738	C29738T	C	T	2	2	AE.8	0.000978
noncoding	29738	C29738V	C	V	2	2	All	0
noncoding	29738	C29738T	C	T	2	2	AM.4	0.007143
noncoding	29738	C29738-	C	-	2	2	AN.1	0.04
noncoding	29738	C29738T	C	T	2	2	AU.1	0.002532
noncoding	29738	C29738T	C	T	2	2	AW.1	0.006098
noncoding	29738	C29738-	C	-	2	2	AY.10	0.00106
noncoding	29738	C29738T	C	T	2	2	AY.104	0.003968
noncoding	29738	C29738-	C	-	2	2	AY.106	0.00067
noncoding	29738	C29738T	C	T	2	2	AY.110	0.000225
noncoding	29738	C29738-	C	-	2	2	AY.111	0.000366
noncoding	29738	C29738A	C	A	2	2	AY.113	0.000285
noncoding	29738	C29738T	C	T	2	2	AY.13	0.000322
noncoding	29738	C29738A	C	A	2	2	AY.16.1	0.00094
noncoding	29738	C29738-	C	-	2	2	AY.19	0.002281
noncoding	29738	C29738A	C	A	2	2	AY.20	0.000078
noncoding	29738	C29738A	C	A	2	2	AY.23	0.000139
noncoding	29738	C29738A	C	A	2	2	AY.24	0.000862
noncoding	29738	C29738T	C	T	2	2	AY.37	0.000632
noncoding	29738	C29738T	C	T	2	2	AY.4.2.1	0.000298
noncoding	29738	C29738T	C	T	2	2	AY.46.2	0.001271
noncoding	29738	C29738-	C	-	2	2	AY.46.3	0.001867
noncoding	29738	C29738A	C	A	2	2	AY.46.4	0.000329
noncoding	29738	C29738A	C	A	2	2	AY.46.6	0.000144
noncoding	29738	C29738A	C	A	2	2	AY.48	0.00093
noncoding	29738	C29738T	C	T	2	2	AY.50	0.001599
noncoding	29738	C29738T	C	T	2	2	AY.51	0.001818
noncoding	29738	C29738-	C	-	2	2	AY.56	0.00321
noncoding	29738	C29738A	C	A	2	2	AY.69	0.000373
noncoding	29738	C29738T	C	T	2	2	AY.70	0.000417
noncoding	29738	C29738-	C	-	2	2	AY.71	0.00095
noncoding	29738	C29738T	C	T	2	2	AY.73	0.001331
noncoding	29738	C29738T	C	T	2	2	AY.87	0.001665
noncoding	29738	C29738A	C	A	2	2	AY.9.2	0.000073
noncoding	29738	C29738T	C	T	2	2	AY.90	0.001369
noncoding	29738	C29738-	C	-	2	2	AY.94	0.000885
noncoding	29738	C29738-	C	-	2	2	AY.95	0.001522
noncoding	29738	C29738T	C	T	2	2	AY.95	0.001522
noncoding	29738	C29738A	C	A	2	2	AY.98	0.000158
noncoding	29738	C29738-	C	-	2	2	AZ.2	0.001642
noncoding	29738	C29738G	C	G	2	2	B.1.1	0.000036
noncoding	29738	C29738T	C	T	2	2	B.1.1.141	0.004024
noncoding	29738	C29738-	C	-	2	2	B.1.1.170	0.002494
noncoding	29738	C29738-	C	-	2	2	B.1.1.194	0.009901
noncoding	29738	C29738T	C	T	2	2	B.1.1.210	0.011429
noncoding	29738	C29738-	C	-	2	2	B.1.1.216	0.001781
noncoding	29738	C29738T	C	T	2	2	B.1.1.231	0.006192
noncoding	29738	C29738-	C	-	2	2	B.1.1.275	0.022472
noncoding	29738	C29738T	C	T	2	2	B.1.1.284	0.000215
noncoding	29738	C29738-	C	-	2	2	B.1.1.284	0.000215
noncoding	29738	C29738-	C	-	2	2	B.1.1.289	0.004167
noncoding	29738	C29738T	C	T	2	2	B.1.1.294	0.002532
noncoding	29738	C29738-	C	-	2	2	B.1.1.303	0.005525
noncoding	29738	C29738T	C	T	2	2	B.1.1.303	0.005525
noncoding	29738	C29738-	C	-	2	2	B.1.1.305	0.007722
noncoding	29738	C29738T	C	T	2	2	B.1.1.306	0.000877
noncoding	29738	C29738T	C	T	2	2	B.1.1.317	0.000823
noncoding	29738	C29738-	C	-	2	2	B.1.1.345	0.086957
noncoding	29738	C29738-	C	-	2	2	B.1.1.348	0.001592
noncoding	29738	C29738-	C	-	2	2	B.1.1.354	0.008772
noncoding	29738	C29738T	C	T	2	2	B.1.1.369	0.000892
noncoding	29738	C29738-	C	-	2	2	B.1.1.372	0.001377
noncoding	29738	C29738T	C	T	2	2	B.1.1.372	0.001377
noncoding	29738	C29738-	C	-	2	2	B.1.1.376	0.011905
noncoding	29738	C29738-	C	-	2	2	B.1.1.389	0.012121
noncoding	29738	C29738-	C	-	2	2	B.1.1.466	0.017391
noncoding	29738	C29738T	C	T	2	2	B.1.1.486	0.003155
noncoding	29738	C29738-	C	-	2	2	B.1.1.50	0.001358
noncoding	29738	C29738-	C	-	2	2	B.1.1.528	0.009615
noncoding	29738	C29738-	C	-	2	2	B.1.1.71	0.012121
noncoding	29738	C29738-	C	-	2	2	B.1.111	0.00235
noncoding	29738	C29738-	C	-	2	2	B.1.126	0.002551
noncoding	29738	C29738T	C	T	2	2	B.1.128	0.001271
noncoding	29738	C29738-	C	-	2	2	B.1.160.32	0.008584
noncoding	29738	C29738-	C	-	2	2	B.1.177.10	0.001756
noncoding	29738	C29738T	C	T	2	2	B.1.177.20	0.003035
noncoding	29738	C29738-	C	-	2	2	B.1.177.4	0.000422
noncoding	29738	C29738-	C	-	2	2	B.1.177.51	0.009132
noncoding	29738	C29738-	C	-	2	2	B.1.177.55	0.004662
noncoding	29738	C29738-	C	-	2	2	B.1.177.6	0.001953
noncoding	29738	C29738T	C	T	2	2	B.1.177.62	0.002384
noncoding	29738	C29738-	C	-	2	2	B.1.177.77	0.001452
noncoding	29738	C29738-	C	-	2	2	B.1.177.78	0.019417
noncoding	29738	C29738A	C	A	2	2	B.1.177.81	0.000379
noncoding	29738	C29738-	C	-	2	2	B.1.189	0.008584
noncoding	29738	C29738-	C	-	2	2	B.1.214.2	0.001199
noncoding	29738	C29738T	C	T	2	2	B.1.222	0.003384
noncoding	29738	C29738-	C	-	2	2	B.1.23	0.012121
noncoding	29738	C29738-	C	-	2	2	B.1.258.10	0.022727
noncoding	29738	C29738T	C	T	2	2	B.1.258.21	0.015504
noncoding	29738	C29738T	C	T	2	2	B.1.270	0.011236
noncoding	29738	C29738-	C	-	2	2	B.1.298	0.004228
noncoding	29738	C29738-	C	-	2	2	B.1.301	0.011834
noncoding	29738	C29738-	C	-	2	2	B.1.350	0.005865
noncoding	29738	C29738-	C	-	2	2	B.1.36.10	0.009569
noncoding	29738	C29738T	C	T	2	2	B.1.36.24	0.012346
noncoding	29738	C29738-	C	-	2	2	B.1.36.26	0.005714
noncoding	29738	C29738-	C	-	2	2	B.1.36.8	0.002
noncoding	29738	C29738-	C	-	2	2	B.1.391	0.002255
noncoding	29738	C29738T	C	T	2	2	B.1.396	0.001411
noncoding	29738	C29738-	C	-	2	2	B.1.425	0.005988
noncoding	29738	C29738-	C	-	2	2	B.1.436	0.002058
noncoding	29738	C29738T	C	T	2	2	B.1.438.1	0.000215
noncoding	29738	C29738-	C	-	2	2	B.1.470	0.002809
noncoding	29738	C29738G	C	G	2	2	B.1.497	0.00063
noncoding	29738	C29738-	C	-	2	2	B.1.503	0.004975
noncoding	29738	C29738-	C	-	2	2	B.1.509	0.001732
noncoding	29738	C29738-	C	-	2	2	B.1.543	0.02
noncoding	29738	C29738-	C	-	2	2	B.1.551	0.002581
noncoding	29738	C29738A	C	A	2	2	B.1.561	0.000794
noncoding	29738	C29738-	C	-	2	2	B.1.565	0.001621
noncoding	29738	C29738-	C	-	2	2	B.1.567	0.006667
noncoding	29738	C29738-	C	-	2	2	B.1.575.1	0.004878
noncoding	29738	C29738T	C	T	2	2	B.1.580	0.00813
noncoding	29738	C29738T	C	T	2	2	B.1.588	0.00182
noncoding	29738	C29738-	C	-	2	2	B.1.597	0.009259
noncoding	29738	C29738T	C	T	2	2	B.1.599	0.007299
noncoding	29738	C29738-	C	-	2	2	B.1.617.1	0.000258
noncoding	29738	C29738-	C	-	2	2	B.1.620	0.001892
noncoding	29738	C29738-	C	-	2	2	B.1.628	0.000705
noncoding	29738	C29738-	C	-	2	2	B.3.1	0.003317
noncoding	29738	C29738T	C	T	2	2	B.4	0.004415
noncoding	29738	C29738T	C	T	2	2	B.40	0.000729
noncoding	29738	C29738-	C	-	2	2	C.36	0.001821
noncoding	29738	C29738T	C	T	2	2	C.36	0.001821
noncoding	29738	C29738-	C	-	2	2	C.36.2	0.068966
noncoding	29738	C29738-	C	-	2	2	C.38	0.016129
noncoding	29738	C29738G	C	G	2	2	P.1	0.000032
noncoding	29738	C29738A	C	A	2	2	P.1	0.000032
noncoding	29738	C29738-	C	-	2	2	P.1.13	0.001797
noncoding	29738	C29738T	C	T	2	2	P.1.15	0.000465
noncoding	29738	C29738T	C	T	2	2	P.1.17	0.000324
noncoding	29738	C29738T	C	T	2	2	P.2	0.000373
noncoding	29738	C29738-	C	-	2	2	P.6	0.006289
noncoding	29738	C29738T	C	T	2	2	Q.1	0.000253
noncoding	29738	C29738-	C	-	2	2	Q.8	0.00033
noncoding	29738	C29738T	C	T	1	1	A	0.000387
noncoding	29738	C29738G	C	G	1	1	A.1	0.000282
noncoding	29738	C29738-	C	-	1	1	A.2	0.000662
noncoding	29738	C29738-	C	-	1	1	A.23.1	0.000704
noncoding	29738	C29738T	C	T	1	1	A.25	0.018182
noncoding	29738	C29738-	C	-	1	1	A.30	0.142857
noncoding	29738	C29738T	C	T	1	1	A.5	0.001923
noncoding	29738	C29738-	C	-	1	1	AH.2	0.012048
noncoding	29738	C29738T	C	T	1	1	AH.3	0.003802
noncoding	29738	C29738-	C	-	1	1	AK.2	0.045455
noncoding	29738	C29738R	C	R	1	1	All	0
noncoding	29738	C29738W	C	W	1	1	All	0
noncoding	29738	C29738H	C	H	1	1	All	0
noncoding	29738	C29738-	C	-	1	1	AT.1	0.005128
noncoding	29738	C29738-	C	-	1	1	AU.1	0.001266
noncoding	29738	C29738-	C	-	1	1	AU.3	0.00211
noncoding	29738	C29738T	C	T	1	1	AY.1	0.000396
noncoding	29738	C29738A	C	A	1	1	AY.10	0.00053
noncoding	29738	C29738-	C	-	1	1	AY.105	0.000643
noncoding	29738	C29738A	C	A	1	1	AY.105	0.000643
noncoding	29738	C29738A	C	A	1	1	AY.106	0.000335
noncoding	29738	C29738T	C	T	1	1	AY.108	0.001103
noncoding	29738	C29738A	C	A	1	1	AY.108	0.001103
noncoding	29738	C29738-	C	-	1	1	AY.108	0.001103
noncoding	29738	C29738T	C	T	1	1	AY.113	0.000142
noncoding	29738	C29738T	C	T	1	1	AY.114	0.000231
noncoding	29738	C29738A	C	A	1	1	AY.116.1	0.000311
noncoding	29738	C29738G	C	G	1	1	AY.117	0.000085
noncoding	29738	C29738A	C	A	1	1	AY.120	0.000037
noncoding	29738	C29738-	C	-	1	1	AY.120.1	0.000321
noncoding	29738	C29738-	C	-	1	1	AY.120.2.1	0.000498
noncoding	29738	C29738A	C	A	1	1	AY.14	0.000088
noncoding	29738	C29738-	C	-	1	1	AY.16	0.00038
noncoding	29738	C29738T	C	T	1	1	AY.16.1	0.00047
noncoding	29738	C29738A	C	A	1	1	AY.2	0.000356
noncoding	29738	C29738T	C	T	1	1	AY.23.1	0.000417
noncoding	29738	C29738-	C	-	1	1	AY.24	0.000431
noncoding	29738	C29738G	C	G	1	1	AY.26	0.000028
noncoding	29738	C29738T	C	T	1	1	AY.27	0.000065
noncoding	29738	C29738T	C	T	1	1	AY.28	0.00189
noncoding	29738	C29738A	C	A	1	1	AY.29	0.000016
noncoding	29738	C29738-	C	-	1	1	AY.29.1	0.000221
noncoding	29738	C29738G	C	G	1	1	AY.3	0.00001
noncoding	29738	C29738T	C	T	1	1	AY.31	0.018519
noncoding	29738	C29738T	C	T	1	1	AY.32	0.000532
noncoding	29738	C29738A	C	A	1	1	AY.34.1	0.00051
noncoding	29738	C29738T	C	T	1	1	AY.35	0.000233
noncoding	29738	C29738G	C	G	1	1	AY.39	0.000025
noncoding	29738	C29738T	C	T	1	1	AY.4.1	0.000737
noncoding	29738	C29738A	C	A	1	1	AY.4.3	0.000842
noncoding	29738	C29738T	C	T	1	1	AY.4.3	0.000842
noncoding	29738	C29738T	C	T	1	1	AY.40	0.000964
noncoding	29738	C29738A	C	A	1	1	AY.45	0.000122
noncoding	29738	C29738A	C	A	1	1	AY.46	0.000104
noncoding	29738	C29738T	C	T	1	1	AY.46.1	0.001027
noncoding	29738	C29738T	C	T	1	1	AY.46.3	0.000934
noncoding	29738	C29738T	C	T	1	1	AY.46.5	0.000198
noncoding	29738	C29738-	C	-	1	1	AY.48	0.000465
noncoding	29738	C29738T	C	T	1	1	AY.48	0.000465
noncoding	29738	C29738G	C	G	1	1	AY.5	0.000021
noncoding	29738	C29738A	C	A	1	1	AY.5	0.000021
noncoding	29738	C29738T	C	T	1	1	AY.5.4	0.000277
noncoding	29738	C29738-	C	-	1	1	AY.52	0.000814
noncoding	29738	C29738A	C	A	1	1	AY.52	0.000814
noncoding	29738	C29738T	C	T	1	1	AY.53	0.000288
noncoding	29738	C29738-	C	-	1	1	AY.53	0.000288
noncoding	29738	C29738-	C	-	1	1	AY.55	0.000917
noncoding	29738	C29738T	C	T	1	1	AY.56	0.001605
noncoding	29738	C29738T	C	T	1	1	AY.57	0.000656
noncoding	29738	C29738A	C	A	1	1	AY.60	0.000938
noncoding	29738	C29738-	C	-	1	1	AY.66	0.00107
noncoding	29738	C29738T	C	T	1	1	AY.67	0.000464
noncoding	29738	C29738T	C	T	1	1	AY.7	0.000196
noncoding	29738	C29738T	C	T	1	1	AY.7.1	0.000113
noncoding	29738	C29738T	C	T	1	1	AY.79	0.001211
noncoding	29738	C29738T	C	T	1	1	AY.8	0.000606
noncoding	29738	C29738T	C	T	1	1	AY.80	0.001129
noncoding	29738	C29738-	C	-	1	1	AY.81	0.001992
noncoding	29738	C29738T	C	T	1	1	AY.82	0.001357
noncoding	29738	C29738-	C	-	1	1	AY.87	0.000833
noncoding	29738	C29738-	C	-	1	1	AY.88	0.000884
noncoding	29738	C29738G	C	G	1	1	AY.88	0.000884
noncoding	29738	C29738A	C	A	1	1	AY.9	0.000068
noncoding	29738	C29738G	C	G	1	1	AY.90	0.000684
noncoding	29738	C29738-	C	-	1	1	AY.91	0.00073
noncoding	29738	C29738T	C	T	1	1	AY.96	0.002075
noncoding	29738	C29738T	C	T	1	1	AY.97	0.001701
noncoding	29738	C29738-	C	-	1	1	AY.98	0.000079
noncoding	29738	C29738-	C	-	1	1	AZ.1	0.000867
noncoding	29738	C29738T	C	T	1	1	B	0.000128
noncoding	29738	C29738H	C	H	1	1	B.1	0.000009
noncoding	29738	C29738-	C	-	1	1	B.1.1.10	0.001115
noncoding	29738	C29738T	C	T	1	1	B.1.1.129	0.009174
noncoding	29738	C29738-	C	-	1	1	B.1.1.139	0.022727
noncoding	29738	C29738-	C	-	1	1	B.1.1.154	0.04
noncoding	29738	C29738T	C	T	1	1	B.1.1.157	0.000913
noncoding	29738	C29738T	C	T	1	1	B.1.1.161	0.003534
noncoding	29738	C29738T	C	T	1	1	B.1.1.170	0.001247
noncoding	29738	C29738A	C	A	1	1	B.1.1.174	0.003378
noncoding	29738	C29738-	C	-	1	1	B.1.1.186	0.003436
noncoding	29738	C29738T	C	T	1	1	B.1.1.189	0.001513
noncoding	29738	C29738-	C	-	1	1	B.1.1.196	0.005714
noncoding	29738	C29738-	C	-	1	1	B.1.1.197	0.037037
noncoding	29738	C29738-	C	-	1	1	B.1.1.205	0.003717
noncoding	29738	C29738-	C	-	1	1	B.1.1.218	0.007692
noncoding	29738	C29738-	C	-	1	1	B.1.1.227	0.004348
noncoding	29738	C29738-	C	-	1	1	B.1.1.229	0.005747
noncoding	29738	C29738T	C	T	1	1	B.1.1.243	0.004082
noncoding	29738	C29738T	C	T	1	1	B.1.1.265	0.003155
noncoding	29738	C29738A	C	A	1	1	B.1.1.27	0.00565
noncoding	29738	C29738T	C	T	1	1	B.1.1.280	0.003086
noncoding	29738	C29738-	C	-	1	1	B.1.1.286	0.002899
noncoding	29738	C29738T	C	T	1	1	B.1.1.297	0.002237
noncoding	29738	C29738-	C	-	1	1	B.1.1.297	0.002237
noncoding	29738	C29738-	C	-	1	1	B.1.1.298	0.000862
noncoding	29738	C29738T	C	T	1	1	B.1.1.304	0.002809
noncoding	29738	C29738T	C	T	1	1	B.1.1.316	0.000925
noncoding	29738	C29738T	C	T	1	1	B.1.1.318	0.000302
noncoding	29738	C29738T	C	T	1	1	B.1.1.344	0.010753
noncoding	29738	C29738T	C	T	1	1	B.1.1.348	0.000796
noncoding	29738	C29738-	C	-	1	1	B.1.1.352	0.03125
noncoding	29738	C29738T	C	T	1	1	B.1.1.354	0.004386
noncoding	29738	C29738-	C	-	1	1	B.1.1.362	0.005618
noncoding	29738	C29738T	C	T	1	1	B.1.1.368	0.003086
noncoding	29738	C29738G	C	G	1	1	B.1.1.37	0.000193
noncoding	29738	C29738A	C	A	1	1	B.1.1.39	0.00051
noncoding	29738	C29738-	C	-	1	1	B.1.1.398	0.003226
noncoding	29738	C29738T	C	T	1	1	B.1.1.416	0.000905
noncoding	29738	C29738-	C	-	1	1	B.1.1.420	0.001006
noncoding	29738	C29738-	C	-	1	1	B.1.1.432	0.001266
noncoding	29738	C29738T	C	T	1	1	B.1.1.432	0.001266
noncoding	29738	C29738-	C	-	1	1	B.1.1.433	0.001425
noncoding	29738	C29738T	C	T	1	1	B.1.1.44	0.00241
noncoding	29738	C29738G	C	G	1	1	B.1.1.448	0.002033
noncoding	29738	C29738A	C	A	1	1	B.1.1.448	0.002033
noncoding	29738	C29738-	C	-	1	1	B.1.1.47	0.005348
noncoding	29738	C29738T	C	T	1	1	B.1.1.506	0.037037
noncoding	29738	C29738T	C	T	1	1	B.1.1.514	0.038462
noncoding	29738	C29738-	C	-	1	1	B.1.1.517	0.006803
noncoding	29738	C29738A	C	A	1	1	B.1.1.519	0.00004
noncoding	29738	C29738G	C	G	1	1	B.1.1.519	0.00004
noncoding	29738	C29738T	C	T	1	1	B.1.1.63	0.000386
noncoding	29738	C29738G	C	G	1	1	B.1.104	0.00369
noncoding	29738	C29738T	C	T	1	1	B.1.110.3	0.000718
noncoding	29738	C29738T	C	T	1	1	B.1.126	0.001276
noncoding	29738	C29738-	C	-	1	1	B.1.139	0.000733
noncoding	29738	C29738T	C	T	1	1	B.1.147	0.000756
noncoding	29738	C29738-	C	-	1	1	B.1.159	0.012195
noncoding	29738	C29738G	C	G	1	1	B.1.160	0.000031
noncoding	29738	C29738-	C	-	1	1	B.1.160.15	0.00495
noncoding	29738	C29738-	C	-	1	1	B.1.160.27	0.015152
noncoding	29738	C29738T	C	T	1	1	B.1.160.27	0.015152
noncoding	29738	C29738T	C	T	1	1	B.1.160.29	0.004219
noncoding	29738	C29738T	C	T	1	1	B.1.160.8	0.001289
noncoding	29738	C29738-	C	-	1	1	B.1.162	0.005025
noncoding	29738	C29738-	C	-	1	1	B.1.167	0.007812
noncoding	29738	C29738-	C	-	1	1	B.1.170	0.00431
noncoding	29738	C29738T	C	T	1	1	B.1.173	0.026316
noncoding	29738	C29738A	C	A	1	1	B.1.177	0.000013
noncoding	29738	C29738T	C	T	1	1	B.1.177.17	0.000821
noncoding	29738	C29738G	C	G	1	1	B.1.177.18	0.00116
noncoding	29738	C29738-	C	-	1	1	B.1.177.23	0.003236
noncoding	29738	C29738-	C	-	1	1	B.1.177.30	0.002513
noncoding	29738	C29738-	C	-	1	1	B.1.177.35	0.000691
noncoding	29738	C29738T	C	T	1	1	B.1.177.35	0.000691
noncoding	29738	C29738-	C	-	1	1	B.1.177.46	0.000918
noncoding	29738	C29738G	C	G	1	1	B.1.177.5	0.001242
noncoding	29738	C29738T	C	T	1	1	B.1.177.50	0.004695
noncoding	29738	C29738-	C	-	1	1	B.1.177.53	0.002392
noncoding	29738	C29738G	C	G	1	1	B.1.177.54	0.000606
noncoding	29738	C29738T	C	T	1	1	B.1.177.57	0.000281
noncoding	29738	C29738-	C	-	1	1	B.1.177.57	0.000281
noncoding	29738	C29738T	C	T	1	1	B.1.177.60	0.000218
noncoding	29738	C29738-	C	-	1	1	B.1.177.65	0.000665
noncoding	29738	C29738G	C	G	1	1	B.1.177.7	0.000165
noncoding	29738	C29738T	C	T	1	1	B.1.177.78	0.009709
noncoding	29738	C29738-	C	-	1	1	B.1.177.79	0.002342
noncoding	29738	C29738T	C	T	1	1	B.1.177.79	0.002342
noncoding	29738	C29738G	C	G	1	1	B.1.177.8	0.000752
noncoding	29738	C29738-	C	-	1	1	B.1.177.82	0.000477
noncoding	29738	C29738T	C	T	1	1	B.1.177.86	0.000183
noncoding	29738	C29738T	C	T	1	1	B.1.177.87	0.000728
noncoding	29738	C29738-	C	-	1	1	B.1.177.9	0.001332
noncoding	29738	C29738T	C	T	1	1	B.1.179	0.003759
noncoding	29738	C29738-	C	-	1	1	B.1.180	0.05
noncoding	29738	C29738-	C	-	1	1	B.1.181	0.019608
noncoding	29738	C29738-	C	-	1	1	B.1.192	0.009259
noncoding	29738	C29738G	C	G	1	1	B.1.2	0.000009
noncoding	29738	C29738A	C	A	1	1	B.1.214	0.003663
noncoding	29738	C29738-	C	-	1	1	B.1.214	0.003663
noncoding	29738	C29738G	C	G	1	1	B.1.218	0.005155
noncoding	29738	C29738T	C	T	1	1	B.1.219	0.009434
noncoding	29738	C29738V	C	V	1	1	B.1.221	0.000071
noncoding	29738	C29738-	C	-	1	1	B.1.221.4	0.004167
noncoding	29738	C29738G	C	G	1	1	B.1.222	0.001692
noncoding	29738	C29738-	C	-	1	1	B.1.222	0.001692
noncoding	29738	C29738G	C	G	1	1	B.1.223	0.002778
noncoding	29738	C29738T	C	T	1	1	B.1.229	0.009709
noncoding	29738	C29738-	C	-	1	1	B.1.232	0.000537
noncoding	29738	C29738T	C	T	1	1	B.1.235	0.002519
noncoding	29738	C29738-	C	-	1	1	B.1.237	0.004975
noncoding	29738	C29738T	C	T	1	1	B.1.237	0.004975
noncoding	29738	C29738A	C	A	1	1	B.1.243	0.00007
noncoding	29738	C29738G	C	G	1	1	B.1.248	0.029412
noncoding	29738	C29738T	C	T	1	1	B.1.256	0.017241
noncoding	29738	C29738-	C	-	1	1	B.1.258.16	0.001637
noncoding	29738	C29738G	C	G	1	1	B.1.258.17	0.000104
noncoding	29738	C29738T	C	T	1	1	B.1.258.17	0.000104
noncoding	29738	C29738A	C	A	1	1	B.1.258.17	0.000104
noncoding	29738	C29738-	C	-	1	1	B.1.265	0.001271
noncoding	29738	C29738A	C	A	1	1	B.1.284	0.013158
noncoding	29738	C29738-	C	-	1	1	B.1.291	0.019231
noncoding	29738	C29738T	C	T	1	1	B.1.298	0.002114
noncoding	29738	C29738T	C	T	1	1	B.1.3	0.002618
noncoding	29738	C29738T	C	T	1	1	B.1.306	0.005714
noncoding	29738	C29738A	C	A	1	1	B.1.311	0.000275
noncoding	29738	C29738T	C	T	1	1	B.1.313	0.006579
noncoding	29738	C29738T	C	T	1	1	B.1.315	0.006061
noncoding	29738	C29738-	C	-	1	1	B.1.320	0.001245
noncoding	29738	C29738-	C	-	1	1	B.1.336	0.002439
noncoding	29738	C29738-	C	-	1	1	B.1.337	0.005587
noncoding	29738	C29738-	C	-	1	1	B.1.340	0.004292
noncoding	29738	C29738T	C	T	1	1	B.1.350	0.002933
noncoding	29738	C29738T	C	T	1	1	B.1.351.2	0.000303
noncoding	29738	C29738T	C	T	1	1	B.1.351.3	0.000876
noncoding	29738	C29738-	C	-	1	1	B.1.359	0.022727
noncoding	29738	C29738G	C	G	1	1	B.1.36	0.000146
noncoding	29738	C29738T	C	T	1	1	B.1.36.10	0.004785
noncoding	29738	C29738-	C	-	1	1	B.1.36.19	0.009259
noncoding	29738	C29738G	C	G	1	1	B.1.36.29	0.000517
noncoding	29738	C29738T	C	T	1	1	B.1.36.29	0.000517
noncoding	29738	C29738-	C	-	1	1	B.1.36.36	0.000602
noncoding	29738	C29738-	C	-	1	1	B.1.36.38	0.001642
noncoding	29738	C29738T	C	T	1	1	B.1.36.8	0.001
noncoding	29738	C29738T	C	T	1	1	B.1.361	0.001289
noncoding	29738	C29738A	C	A	1	1	B.1.361	0.001289
noncoding	29738	C29738-	C	-	1	1	B.1.361	0.001289
noncoding	29738	C29738-	C	-	1	1	B.1.362	0.001541
noncoding	29738	C29738T	C	T	1	1	B.1.369	0.000285
noncoding	29738	C29738-	C	-	1	1	B.1.375	0.00082
noncoding	29738	C29738T	C	T	1	1	B.1.381	0.007812
noncoding	29738	C29738T	C	T	1	1	B.1.389	0.001002
noncoding	29738	C29738-	C	-	1	1	B.1.390	0.010638
noncoding	29738	C29738T	C	T	1	1	B.1.391	0.001127
noncoding	29738	C29738G	C	G	1	1	B.1.391	0.001127
noncoding	29738	C29738T	C	T	1	1	B.1.399	0.001934
noncoding	29738	C29738T	C	T	1	1	B.1.409	0.000781
noncoding	29738	C29738T	C	T	1	1	B.1.416	0.001269
noncoding	29738	C29738T	C	T	1	1	B.1.420	0.010417
noncoding	29738	C29738-	C	-	1	1	B.1.424	0.008065
noncoding	29738	C29738T	C	T	1	1	B.1.426	0.001009
noncoding	29738	C29738T	C	T	1	1	B.1.428.2	0.033333
noncoding	29738	C29738G	C	G	1	1	B.1.429	0.000024
noncoding	29738	C29738T	C	T	1	1	B.1.432	0.011236
noncoding	29738	C29738-	C	-	1	1	B.1.433	0.003195
noncoding	29738	C29738T	C	T	1	1	B.1.44	0.008333
noncoding	29738	C29738-	C	-	1	1	B.1.443	0.004673
noncoding	29738	C29738-	C	-	1	1	B.1.478	0.011765
noncoding	29738	C29738A	C	A	1	1	B.1.480	0.002488
noncoding	29738	C29738-	C	-	1	1	B.1.493	0.025641
noncoding	29738	C29738-	C	-	1	1	B.1.499	0.00105
noncoding	29738	C29738T	C	T	1	1	B.1.505	0.004386
noncoding	29738	C29738-	C	-	1	1	B.1.508	0.025641
noncoding	29738	C29738T	C	T	1	1	B.1.517	0.000427
noncoding	29738	C29738T	C	T	1	1	B.1.524	0.001406
noncoding	29738	C29738R	C	R	1	1	B.1.525	0.000113
noncoding	29738	C29738V	C	V	1	1	B.1.525	0.000113
noncoding	29738	C29738W	C	W	1	1	B.1.526	0.000024
noncoding	29738	C29738-	C	-	1	1	B.1.530	0.007143
noncoding	29738	C29738T	C	T	1	1	B.1.537	0.02
noncoding	29738	C29738-	C	-	1	1	B.1.547	0.02439
noncoding	29738	C29738T	C	T	1	1	B.1.554	0.004405
noncoding	29738	C29738-	C	-	1	1	B.1.558	0.004566
noncoding	29738	C29738T	C	T	1	1	B.1.561	0.000397
noncoding	29738	C29738-	C	-	1	1	B.1.564	0.000426
noncoding	29738	C29738-	C	-	1	1	B.1.564.1	0.001577
noncoding	29738	C29738-	C	-	1	1	B.1.580	0.004065
noncoding	29738	C29738-	C	-	1	1	B.1.595.1	0.005848
noncoding	29738	C29738A	C	A	1	1	B.1.596	0.000087
noncoding	29738	C29738-	C	-	1	1	B.1.600	0.005848
noncoding	29738	C29738T	C	T	1	1	B.1.606	0.006024
noncoding	29738	C29738-	C	-	1	1	B.1.617.3	0.002985
noncoding	29738	C29738A	C	A	1	1	B.1.621	0.000089
noncoding	29738	C29738T	C	T	1	1	B.1.623	0.000536
noncoding	29738	C29738G	C	G	1	1	B.1.626	0.005714
noncoding	29738	C29738-	C	-	1	1	B.1.631	0.003367
noncoding	29738	C29738-	C	-	1	1	B.1.633	0.041667
noncoding	29738	C29738T	C	T	1	1	B.1.637	0.000073
noncoding	29738	C29738-	C	-	1	1	B.1.81	0.021277
noncoding	29738	C29738T	C	T	1	1	B.1.9	0.006173
noncoding	29738	C29738T	C	T	1	1	B.11	0.005128
noncoding	29738	C29738A	C	A	1	1	B.3	0.000831
noncoding	29738	C29738-	C	-	1	1	B.3	0.000831
noncoding	29738	C29738-	C	-	1	1	B.31	0.003731
noncoding	29738	C29738-	C	-	1	1	B.4.2	0.066667
noncoding	29738	C29738-	C	-	1	1	B.55	0.00295
noncoding	29738	C29738-	C	-	1	1	B.58	0.010204
noncoding	29738	C29738-	C	-	1	1	B.6	0.00091
noncoding	29738	C29738-	C	-	1	1	B.6.6	0.000889
noncoding	29738	C29738-	C	-	1	1	C.1	0.002392
noncoding	29738	C29738T	C	T	1	1	C.1.2	0.004255
noncoding	29738	C29738-	C	-	1	1	C.1.2	0.004255
noncoding	29738	C29738-	C	-	1	1	C.18	0.002591
noncoding	29738	C29738-	C	-	1	1	C.35	0.000774
noncoding	29738	C29738T	C	T	1	1	C.36.1	0.004149
noncoding	29738	C29738T	C	T	1	1	C.36.3	0.000567
noncoding	29738	C29738A	C	A	1	1	C.37	0.000116
noncoding	29738	C29738A	C	A	1	1	D.5	0.004975
noncoding	29738	C29738T	C	T	1	1	P.1.10.1	0.00813
noncoding	29738	C29738-	C	-	1	1	P.1.11	0.010204
noncoding	29738	C29738T	C	T	1	1	P.1.12	0.000484
noncoding	29738	C29738T	C	T	1	1	P.1.13	0.000898
noncoding	29738	C29738-	C	-	1	1	P.1.2	0.001156
noncoding	29738	C29738T	C	T	1	1	P.1.6	0.001946
noncoding	29738	C29738A	C	A	1	1	P.2	0.000187
noncoding	29738	C29738-	C	-	1	1	P.7	0.004367
noncoding	29738	C29738-	C	-	1	1	Q.3	0.000145
noncoding	29738	C29738-	C	-	1	1	Q.7	0.001111
noncoding	29738	C29738-	C	-	1	1	U.3	0.003861
noncoding	29738	C29738-	C	-	1	1	W.1	0.008696
noncoding	29738	C29738G	C	G	1	1	W.4	0.001351
noncoding	29738	C29738-	C	-	1	1	W.4	0.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.