CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29736

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
noncoding	29736	G29736-		noncoding	G	-	18190	18190	1	29736-29736
noncoding	29736	G29736C		noncoding	G	C	10119	10119	1	29736-29736
noncoding	29736	G29736T		noncoding	G	T	9333	9333	1	29736-29736
noncoding	29736	G29736A		noncoding	G	A	2520	2520	1	29736-29736
noncoding	29736	G29736W		noncoding	G	W	1	1	1	29736-29736
noncoding	29736	G29736D		noncoding	G	D	1	1	1	29736-29736

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
noncoding	29736	G29736-	G	-	18190	18190	All	0.003479
noncoding	29736	G29736C	G	C	10119	10119	All	0.001935
noncoding	29736	G29736T	G	T	9333	9333	All	0.001785
noncoding	29736	G29736C	G	C	5407	5407	B.1.617.2	0.02036
noncoding	29736	G29736C	G	C	4188	4188	AY.98	0.330832
noncoding	29736	G29736-	G	-	3716	3716	B.1.525	0.420505
noncoding	29736	G29736-	G	-	2949	2949	B.1.1.7	0.00264
noncoding	29736	G29736A	G	A	2520	2520	All	0.000482
noncoding	29736	G29736-	G	-	1955	1955	AY.4	0.003043
noncoding	29736	G29736T	G	T	1867	1867	B.1.1.7	0.001671
noncoding	29736	G29736-	G	-	1762	1762	B.1.1.311	0.631089
noncoding	29736	G29736T	G	T	856	856	B.1.438.1	0.091816
noncoding	29736	G29736-	G	-	833	833	AY.38	0.415876
noncoding	29736	G29736T	G	T	706	706	AY.4	0.001099
noncoding	29736	G29736A	G	A	574	574	AY.43	0.002543
noncoding	29736	G29736-	G	-	521	521	B.1.617.2	0.001962
noncoding	29736	G29736A	G	A	490	490	B.1.1.7	0.000439
noncoding	29736	G29736T	G	T	480	480	B.1.617.2	0.001807
noncoding	29736	G29736A	G	A	388	388	B.1.621	0.034345
noncoding	29736	G29736T	G	T	370	370	AY.43	0.001639
noncoding	29736	G29736-	G	-	364	364	B.1.351.2	0.110136
noncoding	29736	G29736T	G	T	353	353	AY.44	0.002149
noncoding	29736	G29736T	G	T	339	339	AY.3	0.003372
noncoding	29736	G29736-	G	-	303	303	AY.39	0.007488
noncoding	29736	G29736T	G	T	303	303	B.1.160	0.00945
noncoding	29736	G29736T	G	T	287	287	AY.120	0.01067
noncoding	29736	G29736-	G	-	286	286	AY.5	0.005906
noncoding	29736	G29736-	G	-	286	286	B.1.258.11	0.113357
noncoding	29736	G29736-	G	-	283	283	B.1	0.002592
noncoding	29736	G29736T	G	T	246	246	AY.25	0.00148
noncoding	29736	G29736-	G	-	240	240	B.1.526	0.005641
noncoding	29736	G29736-	G	-	230	230	B.1.497	0.072395
noncoding	29736	G29736T	G	T	230	230	B.1.565	0.186386
noncoding	29736	G29736T	G	T	220	220	B.1.243	0.015309
noncoding	29736	G29736A	G	A	218	218	AY.4	0.000339
noncoding	29736	G29736-	G	-	189	189	B.1.177	0.002489
noncoding	29736	G29736-	G	-	185	185	AY.103	0.001149
noncoding	29736	G29736T	G	T	161	161	AY.100	0.007407
noncoding	29736	G29736-	G	-	157	157	B.1.2	0.001382
noncoding	29736	G29736T	G	T	157	157	B.1.2	0.001382
noncoding	29736	G29736-	G	-	154	154	AY.25	0.000926
noncoding	29736	G29736T	G	T	153	153	AY.103	0.00095
noncoding	29736	G29736T	G	T	153	153	B.1	0.001401
noncoding	29736	G29736-	G	-	151	151	AY.43	0.000669
noncoding	29736	G29736-	G	-	149	149	B.1.160	0.004647
noncoding	29736	G29736-	G	-	145	145	AY.46.6	0.01047
noncoding	29736	G29736T	G	T	144	144	P.1	0.002269
noncoding	29736	G29736T	G	T	138	138	AY.102	0.003659
noncoding	29736	G29736-	G	-	137	137	B.1.1	0.002485
noncoding	29736	G29736-	G	-	113	113	AY.120	0.004201
noncoding	29736	G29736C	G	C	113	113	AY.43	0.000501
noncoding	29736	G29736-	G	-	113	113	P.1	0.00178
noncoding	29736	G29736-	G	-	112	112	B.1.429	0.002635
noncoding	29736	G29736T	G	T	111	111	AY.39	0.002743
noncoding	29736	G29736-	G	-	106	106	AY.44	0.000645
noncoding	29736	G29736T	G	T	106	106	B.1.466.2	0.041471
noncoding	29736	G29736-	G	-	103	103	B.1.221	0.007316
noncoding	29736	G29736A	G	A	102	102	AY.103	0.000633
noncoding	29736	G29736-	G	-	102	102	AY.42	0.004103
noncoding	29736	G29736-	G	-	97	97	AY.47	0.003017
noncoding	29736	G29736-	G	-	96	96	AY.73	0.063872
noncoding	29736	G29736-	G	-	94	94	B.1.258	0.006255
noncoding	29736	G29736-	G	-	88	88	AY.3	0.000875
noncoding	29736	G29736A	G	A	87	87	B.1.617.2	0.000328
noncoding	29736	G29736-	G	-	85	85	B.1.177.81	0.016092
noncoding	29736	G29736T	G	T	83	83	B.1.1	0.001506
noncoding	29736	G29736-	G	-	70	70	B.1.1.519	0.00278
noncoding	29736	G29736T	G	T	67	67	B.1.177	0.000882
noncoding	29736	G29736-	G	-	61	61	B.1.351	0.001813
noncoding	29736	G29736-	G	-	51	51	B.1.243	0.003549
noncoding	29736	G29736T	G	T	50	50	B.1.160.18	0.364964
noncoding	29736	G29736A	G	A	49	49	B.1.369	0.013976
noncoding	29736	G29736T	G	T	49	49	B.1.596	0.00427
noncoding	29736	G29736-	G	-	47	47	AY.20	0.001827
noncoding	29736	G29736-	G	-	46	46	C.16	0.04878
noncoding	29736	G29736T	G	T	44	44	AY.47	0.001369
noncoding	29736	G29736-	G	-	44	44	B.1.177.24	0.056995
noncoding	29736	G29736C	G	C	43	43	B.1.1.7	0.000038
noncoding	29736	G29736-	G	-	42	42	P.1.16	0.015713
noncoding	29736	G29736T	G	T	41	41	AY.5	0.000847
noncoding	29736	G29736T	G	T	41	41	B.1.429	0.000965
noncoding	29736	G29736-	G	-	40	40	AY.102	0.001061
noncoding	29736	G29736T	G	T	39	39	B.1.1.284	0.004189
noncoding	29736	G29736A	G	A	39	39	B.1.1.306	0.017098
noncoding	29736	G29736T	G	T	39	39	Q.3	0.005656
noncoding	29736	G29736T	G	T	38	38	B.1.427	0.001919
noncoding	29736	G29736C	G	C	37	37	AY.4	0.000058
noncoding	29736	G29736-	G	-	37	37	R.1	0.00333
noncoding	29736	G29736-	G	-	36	36	B.1.258.17	0.003743
noncoding	29736	G29736T	G	T	36	36	R.1	0.00324
noncoding	29736	G29736T	G	T	35	35	AY.20	0.00136
noncoding	29736	G29736-	G	-	35	35	AY.29	0.000552
noncoding	29736	G29736T	G	T	35	35	B.1.1.519	0.00139
noncoding	29736	G29736-	G	-	34	34	AY.119	0.0012
noncoding	29736	G29736A	G	A	33	33	AY.25	0.000198
noncoding	29736	G29736A	G	A	33	33	AY.44	0.000201
noncoding	29736	G29736T	G	T	33	33	B.1.1.70	0.011255
noncoding	29736	G29736-	G	-	32	32	AY.26	0.000906
noncoding	29736	G29736T	G	T	31	31	B.1.170	0.133621
noncoding	29736	G29736T	G	T	31	31	B.1.351.2	0.00938
noncoding	29736	G29736C	G	C	30	30	AY.5.3	0.010121
noncoding	29736	G29736A	G	A	30	30	B.1.1.214	0.001664
noncoding	29736	G29736-	G	-	29	29	AY.100	0.001334
noncoding	29736	G29736-	G	-	29	29	AY.4.2	0.000629
noncoding	29736	G29736-	G	-	29	29	B.1.427	0.001464
noncoding	29736	G29736T	G	T	29	29	B.1.637	0.002119
noncoding	29736	G29736C	G	C	28	28	AY.102	0.000742
noncoding	29736	G29736T	G	T	28	28	AY.46.6	0.002022
noncoding	29736	G29736T	G	T	28	28	B.1.351	0.000832
noncoding	29736	G29736T	G	T	27	27	AY.29	0.000426
noncoding	29736	G29736C	G	C	27	27	AY.60	0.025328
noncoding	29736	G29736-	G	-	27	27	B.1.346	0.035387
noncoding	29736	G29736T	G	T	27	27	B.1.36	0.003939
noncoding	29736	G29736T	G	T	26	26	AY.42	0.001046
noncoding	29736	G29736-	G	-	26	26	AY.6	0.001069
noncoding	29736	G29736A	G	A	25	25	B.1	0.000229
noncoding	29736	G29736-	G	-	25	25	B.1.1.37	0.004822
noncoding	29736	G29736A	G	A	25	25	B.1.243	0.00174
noncoding	29736	G29736A	G	A	24	24	AY.106	0.008038
noncoding	29736	G29736T	G	T	24	24	AY.34	0.002327
noncoding	29736	G29736T	G	T	24	24	B.1.1.207	0.028369
noncoding	29736	G29736T	G	T	23	23	AY.26	0.000651
noncoding	29736	G29736A	G	A	23	23	C.30	0.039724
noncoding	29736	G29736T	G	T	22	22	B.1.1.28	0.006847
noncoding	29736	G29736-	G	-	22	22	B.1.1.368	0.067901
noncoding	29736	G29736T	G	T	22	22	B.1.526	0.000517
noncoding	29736	G29736-	G	-	22	22	B.1.596	0.001917
noncoding	29736	G29736T	G	T	21	21	AY.33	0.001402
noncoding	29736	G29736-	G	-	21	21	B.1.305	0.045161
noncoding	29736	G29736A	G	A	21	21	B.1.637	0.001535
noncoding	29736	G29736A	G	A	21	21	Q.1	0.002653
noncoding	29736	G29736T	G	T	20	20	B.1.1.222	0.00408
noncoding	29736	G29736-	G	-	20	20	B.1.289	0.053191
noncoding	29736	G29736T	G	T	20	20	B.1.525	0.002263
noncoding	29736	G29736-	G	-	20	20	B.1.621	0.00177
noncoding	29736	G29736A	G	A	19	19	AY.13	0.003059
noncoding	29736	G29736-	G	-	19	19	AY.92	0.005458
noncoding	29736	G29736-	G	-	19	19	B.1.1.222	0.003876
noncoding	29736	G29736-	G	-	18	18	AY.118	0.001128
noncoding	29736	G29736A	G	A	18	18	AY.23	0.001255
noncoding	29736	G29736-	G	-	18	18	AY.45	0.00219
noncoding	29736	G29736-	G	-	18	18	B.1.1.172	0.327273
noncoding	29736	G29736-	G	-	18	18	B.1.1.265	0.056782
noncoding	29736	G29736-	G	-	18	18	B.1.1.307	0.04557
noncoding	29736	G29736-	G	-	18	18	B.1.404	0.023438
noncoding	29736	G29736-	G	-	18	18	C.37	0.002089
noncoding	29736	G29736A	G	A	18	18	C.37	0.002089
noncoding	29736	G29736-	G	-	18	18	P.1.14	0.00086
noncoding	29736	G29736T	G	T	17	17	AY.121	0.0023
noncoding	29736	G29736T	G	T	17	17	B.1.237	0.084577
noncoding	29736	G29736A	G	A	16	16	AY.5	0.00033
noncoding	29736	G29736C	G	C	16	16	AY.5	0.00033
noncoding	29736	G29736T	G	T	16	16	B.1.572	0.4
noncoding	29736	G29736T	G	T	15	15	B.1.36.18	0.006303
noncoding	29736	G29736T	G	T	14	14	AY.46	0.001457
noncoding	29736	G29736T	G	T	14	14	AY.75	0.000784
noncoding	29736	G29736C	G	C	14	14	B.1.1.217	0.050909
noncoding	29736	G29736T	G	T	14	14	B.1.234	0.001847
noncoding	29736	G29736-	G	-	14	14	B.1.240	0.003018
noncoding	29736	G29736-	G	-	14	14	B.1.36.1	0.015964
noncoding	29736	G29736-	G	-	14	14	B.1.36.29	0.007243
noncoding	29736	G29736T	G	T	13	13	AY.118	0.000814
noncoding	29736	G29736-	G	-	13	13	AY.61	0.001362
noncoding	29736	G29736-	G	-	13	13	AY.74	0.001503
noncoding	29736	G29736T	G	T	13	13	AY.9.2	0.000477
noncoding	29736	G29736-	G	-	13	13	AY.98.1	0.00063
noncoding	29736	G29736A	G	A	13	13	P.1	0.000205
noncoding	29736	G29736T	G	T	12	12	AY.116	0.003441
noncoding	29736	G29736T	G	T	12	12	AY.23	0.000837
noncoding	29736	G29736A	G	A	12	12	AY.29	0.000189
noncoding	29736	G29736T	G	T	12	12	AY.6	0.000494
noncoding	29736	G29736-	G	-	12	12	B.1.1.214	0.000665
noncoding	29736	G29736-	G	-	12	12	B.1.1.416	0.01086
noncoding	29736	G29736T	G	T	12	12	B.1.177.81	0.002272
noncoding	29736	G29736T	G	T	12	12	B.1.258	0.000799
noncoding	29736	G29736-	G	-	12	12	B.1.36	0.001751
noncoding	29736	G29736T	G	T	12	12	B.1.621	0.001062
noncoding	29736	G29736T	G	T	12	12	C.37	0.001393
noncoding	29736	G29736T	G	T	11	11	A.1	0.0031
noncoding	29736	G29736A	G	A	11	11	AY.102	0.000292
noncoding	29736	G29736-	G	-	11	11	AY.117	0.00093
noncoding	29736	G29736-	G	-	11	11	AY.75	0.000616
noncoding	29736	G29736-	G	-	11	11	AY.9	0.000744
noncoding	29736	G29736-	G	-	11	11	AY.9.2	0.000404
noncoding	29736	G29736T	G	T	11	11	B.1.1.159	0.051402
noncoding	29736	G29736-	G	-	11	11	B.1.1.33	0.00463
noncoding	29736	G29736-	G	-	11	11	B.1.177.62	0.013111
noncoding	29736	G29736-	G	-	11	11	B.1.177.75	0.011446
noncoding	29736	G29736T	G	T	11	11	B.1.408	0.04059
noncoding	29736	G29736-	G	-	11	11	P.2	0.002053
noncoding	29736	G29736T	G	T	11	11	P.3	0.017544
noncoding	29736	G29736C	G	C	10	10	AY.114	0.002311
noncoding	29736	G29736-	G	-	10	10	AY.114	0.002311
noncoding	29736	G29736A	G	A	10	10	AY.14	0.00088
noncoding	29736	G29736-	G	-	10	10	AY.23	0.000697
noncoding	29736	G29736C	G	C	10	10	AY.32	0.005325
noncoding	29736	G29736C	G	C	10	10	AY.44	0.000061
noncoding	29736	G29736-	G	-	10	10	AY.46.4	0.001645
noncoding	29736	G29736T	G	T	10	10	AY.5.3	0.003374
noncoding	29736	G29736C	G	C	10	10	AY.98.1	0.000484
noncoding	29736	G29736-	G	-	10	10	B	0.001278
noncoding	29736	G29736-	G	-	10	10	B.1.1.25	0.005685
noncoding	29736	G29736-	G	-	10	10	B.1.1.279	0.011211
noncoding	29736	G29736-	G	-	10	10	B.1.1.28	0.003112
noncoding	29736	G29736-	G	-	10	10	B.1.1.306	0.004384
noncoding	29736	G29736T	G	T	10	10	B.1.1.316	0.009251
noncoding	29736	G29736T	G	T	10	10	B.1.311	0.002746
noncoding	29736	G29736-	G	-	10	10	B.1.416	0.01269
noncoding	29736	G29736A	G	A	10	10	B.1.429	0.000235
noncoding	29736	G29736-	G	-	10	10	B.1.595	0.00261
noncoding	29736	G29736T	G	T	10	10	B.1.617.1	0.00129
noncoding	29736	G29736-	G	-	10	10	B.1.623	0.005365
noncoding	29736	G29736T	G	T	10	10	P.1.17.1	0.008749
noncoding	29736	G29736-	G	-	9	9	AY.12	0.002845
noncoding	29736	G29736T	G	T	9	9	AY.16	0.003417
noncoding	29736	G29736-	G	-	9	9	AY.2	0.003205
noncoding	29736	G29736-	G	-	9	9	AY.34.1	0.004589
noncoding	29736	G29736-	G	-	9	9	AY.46	0.000937
noncoding	29736	G29736-	G	-	9	9	AY.46.5	0.001786
noncoding	29736	G29736T	G	T	9	9	AY.5.4	0.00249
noncoding	29736	G29736T	G	T	9	9	AY.61	0.000943
noncoding	29736	G29736A	G	A	9	9	B.1.1	0.000163
noncoding	29736	G29736C	G	C	9	9	B.1.1	0.000163
noncoding	29736	G29736T	G	T	9	9	B.1.1.216	0.008014
noncoding	29736	G29736T	G	T	9	9	B.1.1.269	0.012179
noncoding	29736	G29736-	G	-	9	9	B.1.1.434	0.003137
noncoding	29736	G29736-	G	-	9	9	B.1.160.14	0.019068
noncoding	29736	G29736-	G	-	9	9	B.1.234	0.001187
noncoding	29736	G29736-	G	-	9	9	B.1.258.3	0.015075
noncoding	29736	G29736-	G	-	9	9	B.1.398	0.026786
noncoding	29736	G29736-	G	-	9	9	B.1.400	0.003861
noncoding	29736	G29736-	G	-	9	9	B.1.422	0.007311
noncoding	29736	G29736A	G	A	9	9	B.1.609	0.004314
noncoding	29736	G29736T	G	T	9	9	D.2	0.000675
noncoding	29736	G29736T	G	T	8	8	AY.113	0.001139
noncoding	29736	G29736C	G	C	8	8	AY.117	0.000676
noncoding	29736	G29736-	G	-	8	8	AY.34	0.000776
noncoding	29736	G29736-	G	-	8	8	AY.54	0.000763
noncoding	29736	G29736T	G	T	8	8	AY.71	0.0038
noncoding	29736	G29736-	G	-	8	8	AY.75.1	0.001442
noncoding	29736	G29736T	G	T	8	8	AY.99.2	0.000737
noncoding	29736	G29736-	G	-	8	8	AY.99.2	0.000737
noncoding	29736	G29736-	G	-	8	8	B.1.1.153	0.008762
noncoding	29736	G29736T	G	T	8	8	B.1.1.214	0.000444
noncoding	29736	G29736T	G	T	8	8	B.1.1.71	0.048485
noncoding	29736	G29736T	G	T	8	8	B.1.177.83	0.011852
noncoding	29736	G29736-	G	-	8	8	B.1.311	0.002197
noncoding	29736	G29736-	G	-	8	8	B.1.36.22	0.009662
noncoding	29736	G29736-	G	-	8	8	C.36.3	0.004538
noncoding	29736	G29736-	G	-	7	7	A.1	0.001973
noncoding	29736	G29736T	G	T	7	7	AD.2.1	0.318182
noncoding	29736	G29736-	G	-	7	7	AY.13	0.001127
noncoding	29736	G29736C	G	C	7	7	AY.29	0.00011
noncoding	29736	G29736A	G	A	7	7	AY.3	0.00007
noncoding	29736	G29736T	G	T	7	7	AY.39.1	0.000277
noncoding	29736	G29736T	G	T	7	7	AY.4.4	0.002864
noncoding	29736	G29736T	G	T	7	7	AY.4.5	0.000752
noncoding	29736	G29736T	G	T	7	7	AY.45	0.000852
noncoding	29736	G29736T	G	T	7	7	AY.74	0.00081
noncoding	29736	G29736-	G	-	7	7	AY.85	0.00299
noncoding	29736	G29736T	G	T	7	7	B	0.000895
noncoding	29736	G29736A	G	A	7	7	B.1.1.174	0.023649
noncoding	29736	G29736T	G	T	7	7	B.1.1.318	0.002112
noncoding	29736	G29736-	G	-	7	7	B.1.1.39	0.003568
noncoding	29736	G29736-	G	-	7	7	B.1.110.3	0.005029
noncoding	29736	G29736T	G	T	7	7	B.1.139	0.005132
noncoding	29736	G29736-	G	-	7	7	B.1.160.33	0.030973
noncoding	29736	G29736A	G	A	7	7	B.1.2	0.000062
noncoding	29736	G29736A	G	A	7	7	B.1.258	0.000466
noncoding	29736	G29736A	G	A	7	7	B.1.428	0.007143
noncoding	29736	G29736-	G	-	7	7	B.1.499	0.007353
noncoding	29736	G29736T	G	T	7	7	B.1.499	0.007353
noncoding	29736	G29736A	G	A	7	7	B.1.525	0.000792
noncoding	29736	G29736T	G	T	7	7	B.1.600	0.040936
noncoding	29736	G29736T	G	T	7	7	P.1.14	0.000335
noncoding	29736	G29736-	G	-	6	6	A	0.002322
noncoding	29736	G29736T	G	T	6	6	AY.117	0.000507
noncoding	29736	G29736-	G	-	6	6	AY.14	0.000528
noncoding	29736	G29736-	G	-	6	6	AY.33	0.000401
noncoding	29736	G29736C	G	C	6	6	AY.35	0.001398
noncoding	29736	G29736-	G	-	6	6	AY.35	0.001398
noncoding	29736	G29736C	G	C	6	6	AY.46	0.000624
noncoding	29736	G29736-	G	-	6	6	AY.65	0.003198
noncoding	29736	G29736T	G	T	6	6	AY.9.1	0.000502
noncoding	29736	G29736T	G	T	6	6	AY.98.1	0.000291
noncoding	29736	G29736-	G	-	6	6	B.1.1.316	0.00555
noncoding	29736	G29736T	G	T	6	6	B.1.1.33	0.002525
noncoding	29736	G29736C	G	C	6	6	B.1.1.369	0.002677
noncoding	29736	G29736T	G	T	6	6	B.1.1.464	0.008837
noncoding	29736	G29736T	G	T	6	6	B.1.1.50	0.004073
noncoding	29736	G29736T	G	T	6	6	B.1.258.17	0.000624
noncoding	29736	G29736-	G	-	6	6	B.1.389	0.006012
noncoding	29736	G29736T	G	T	6	6	B.1.556	0.045113
noncoding	29736	G29736T	G	T	6	6	B.1.595	0.001566
noncoding	29736	G29736-	G	-	6	6	B.1.595.1	0.035088
noncoding	29736	G29736-	G	-	6	6	B.1.637	0.000438
noncoding	29736	G29736A	G	A	6	6	B.23	0.017544
noncoding	29736	G29736-	G	-	6	6	B.40	0.002186
noncoding	29736	G29736-	G	-	6	6	D.2	0.00045
noncoding	29736	G29736-	G	-	6	6	N.4	0.025532
noncoding	29736	G29736-	G	-	6	6	Q.1	0.000758
noncoding	29736	G29736C	G	C	5	5	AY.103	0.000031
noncoding	29736	G29736C	G	C	5	5	AY.106	0.001674
noncoding	29736	G29736A	G	A	5	5	AY.20	0.000194
noncoding	29736	G29736C	G	C	5	5	AY.25	0.00003
noncoding	29736	G29736-	G	-	5	5	AY.36	0.000741
noncoding	29736	G29736A	G	A	5	5	AY.39	0.000124
noncoding	29736	G29736A	G	A	5	5	AY.46	0.00052
noncoding	29736	G29736T	G	T	5	5	AY.9	0.000338
noncoding	29736	G29736A	G	A	5	5	AY.99.2	0.000461
noncoding	29736	G29736-	G	-	5	5	B.1.1.189	0.007564
noncoding	29736	G29736T	G	T	5	5	B.1.1.306	0.002192
noncoding	29736	G29736T	G	T	5	5	B.1.1.311	0.001791
noncoding	29736	G29736-	G	-	5	5	B.1.1.318	0.001509
noncoding	29736	G29736A	G	A	5	5	B.1.127	0.010989
noncoding	29736	G29736-	G	-	5	5	B.1.149	0.017123
noncoding	29736	G29736-	G	-	5	5	B.1.177.7	0.000824
noncoding	29736	G29736-	G	-	5	5	B.1.177.86	0.000917
noncoding	29736	G29736-	G	-	5	5	B.1.258.14	0.004902
noncoding	29736	G29736-	G	-	5	5	B.1.279	0.002568
noncoding	29736	G29736T	G	T	5	5	B.1.36.29	0.002587
noncoding	29736	G29736-	G	-	5	5	B.1.408	0.01845
noncoding	29736	G29736T	G	T	5	5	B.1.411	0.018519
noncoding	29736	G29736-	G	-	5	5	B.1.609	0.002397
noncoding	29736	G29736T	G	T	5	5	C.36	0.004554
noncoding	29736	G29736-	G	-	5	5	P.1.15	0.001162
noncoding	29736	G29736-	G	-	5	5	Q.4	0.002274
noncoding	29736	G29736T	G	T	4	4	A	0.001548
noncoding	29736	G29736T	G	T	4	4	A.2.5.2	0.006289
noncoding	29736	G29736A	G	A	4	4	AY.100	0.000184
noncoding	29736	G29736T	G	T	4	4	AY.106	0.00134
noncoding	29736	G29736-	G	-	4	4	AY.109	0.002959
noncoding	29736	G29736A	G	A	4	4	AY.119	0.000141
noncoding	29736	G29736A	G	A	4	4	AY.121	0.000541
noncoding	29736	G29736T	G	T	4	4	AY.29.1	0.000882
noncoding	29736	G29736T	G	T	4	4	AY.3.1	0.000341
noncoding	29736	G29736-	G	-	4	4	AY.30	0.001583
noncoding	29736	G29736C	G	C	4	4	AY.39	0.000099
noncoding	29736	G29736T	G	T	4	4	AY.5.1	0.015038
noncoding	29736	G29736C	G	C	4	4	AY.5.4	0.001107
noncoding	29736	G29736T	G	T	4	4	AY.54	0.000381
noncoding	29736	G29736-	G	-	4	4	AY.59	0.002119
noncoding	29736	G29736C	G	C	4	4	AY.73	0.002661
noncoding	29736	G29736T	G	T	4	4	AY.78	0.006163
noncoding	29736	G29736-	G	-	4	4	AY.84	0.00175
noncoding	29736	G29736C	G	C	4	4	B.1	0.000037
noncoding	29736	G29736T	G	T	4	4	B.1.1.116	0.25
noncoding	29736	G29736T	G	T	4	4	B.1.1.194	0.019802
noncoding	29736	G29736T	G	T	4	4	B.1.1.218	0.030769
noncoding	29736	G29736-	G	-	4	4	B.1.1.317	0.001647
noncoding	29736	G29736C	G	C	4	4	B.1.1.337	0.014388
noncoding	29736	G29736T	G	T	4	4	B.1.1.348	0.003185
noncoding	29736	G29736C	G	C	4	4	B.1.1.39	0.002039
noncoding	29736	G29736T	G	T	4	4	B.1.1.397	0.009009
noncoding	29736	G29736-	G	-	4	4	B.1.1.464	0.005891
noncoding	29736	G29736A	G	A	4	4	B.1.1.519	0.000159
noncoding	29736	G29736A	G	A	4	4	B.1.177	0.000053
noncoding	29736	G29736T	G	T	4	4	B.1.177.48	0.0125
noncoding	29736	G29736-	G	-	4	4	B.1.177.60	0.000874
noncoding	29736	G29736T	G	T	4	4	B.1.177.86	0.000734
noncoding	29736	G29736-	G	-	4	4	B.1.210	0.008529
noncoding	29736	G29736T	G	T	4	4	B.1.236	0.008214
noncoding	29736	G29736T	G	T	4	4	B.1.416	0.005076
noncoding	29736	G29736T	G	T	4	4	B.1.426	0.004036
noncoding	29736	G29736C	G	C	4	4	B.1.429	0.000094
noncoding	29736	G29736-	G	-	4	4	B.1.517	0.001708
noncoding	29736	G29736-	G	-	4	4	B.1.582	0.001963
noncoding	29736	G29736-	G	-	4	4	B.1.588	0.00364
noncoding	29736	G29736-	G	-	4	4	B.1.627	0.008081
noncoding	29736	G29736-	G	-	4	4	N.5	0.007067
noncoding	29736	G29736A	G	A	4	4	P.1.1	0.001271
noncoding	29736	G29736T	G	T	4	4	P.1.15	0.000929
noncoding	29736	G29736T	G	T	4	4	P.2	0.000747
noncoding	29736	G29736T	G	T	4	4	Q.1	0.000505
noncoding	29736	G29736C	G	C	3	3	AY.108	0.003308
noncoding	29736	G29736C	G	C	3	3	AY.109	0.002219
noncoding	29736	G29736-	G	-	3	3	AY.110	0.000338
noncoding	29736	G29736T	G	T	3	3	AY.114	0.000693
noncoding	29736	G29736A	G	A	3	3	AY.117	0.000254
noncoding	29736	G29736A	G	A	3	3	AY.120	0.000112
noncoding	29736	G29736-	G	-	3	3	AY.27	0.000194
noncoding	29736	G29736-	G	-	3	3	AY.3.1	0.000256
noncoding	29736	G29736-	G	-	3	3	AY.32	0.001597
noncoding	29736	G29736A	G	A	3	3	AY.36	0.000445
noncoding	29736	G29736T	G	T	3	3	AY.37	0.000948
noncoding	29736	G29736-	G	-	3	3	AY.39.1	0.000119
noncoding	29736	G29736A	G	A	3	3	AY.39.1	0.000119
noncoding	29736	G29736T	G	T	3	3	AY.4.3	0.002525
noncoding	29736	G29736-	G	-	3	3	AY.40	0.002893
noncoding	29736	G29736T	G	T	3	3	AY.41	0.000882
noncoding	29736	G29736C	G	C	3	3	AY.42	0.000121
noncoding	29736	G29736C	G	C	3	3	AY.45	0.000365
noncoding	29736	G29736T	G	T	3	3	AY.46.2	0.001906
noncoding	29736	G29736T	G	T	3	3	AY.46.3	0.002801
noncoding	29736	G29736-	G	-	3	3	AY.5.3	0.001012
noncoding	29736	G29736-	G	-	3	3	AY.51	0.002727
noncoding	29736	G29736T	G	T	3	3	AY.53	0.000863
noncoding	29736	G29736-	G	-	3	3	AY.62	0.001307
noncoding	29736	G29736-	G	-	3	3	AY.7	0.000588
noncoding	29736	G29736C	G	C	3	3	AY.75	0.000168
noncoding	29736	G29736T	G	T	3	3	AY.84	0.001312
noncoding	29736	G29736C	G	C	3	3	AY.88	0.002653
noncoding	29736	G29736A	G	A	3	3	AY.9.2	0.00011
noncoding	29736	G29736T	G	T	3	3	AY.94	0.001328
noncoding	29736	G29736A	G	A	3	3	AY.98.1	0.000145
noncoding	29736	G29736A	G	A	3	3	B	0.000383
noncoding	29736	G29736-	G	-	3	3	B.1.1.1	0.00098
noncoding	29736	G29736-	G	-	3	3	B.1.1.192	0.006928
noncoding	29736	G29736-	G	-	3	3	B.1.1.228	0.009146
noncoding	29736	G29736-	G	-	3	3	B.1.1.236	0.02069
noncoding	29736	G29736T	G	T	3	3	B.1.1.25	0.001706
noncoding	29736	G29736-	G	-	3	3	B.1.1.337	0.010791
noncoding	29736	G29736-	G	-	3	3	B.1.1.369	0.001339
noncoding	29736	G29736C	G	C	3	3	B.1.1.37	0.000579
noncoding	29736	G29736T	G	T	3	3	B.1.1.37	0.000579
noncoding	29736	G29736-	G	-	3	3	B.1.1.375	0.035714
noncoding	29736	G29736-	G	-	3	3	B.1.1.397	0.006757
noncoding	29736	G29736T	G	T	3	3	B.1.1.409	0.008499
noncoding	29736	G29736-	G	-	3	3	B.1.1.428	0.028302
noncoding	29736	G29736-	G	-	3	3	B.1.1.46	0.0131
noncoding	29736	G29736A	G	A	3	3	B.1.1.485	0.05
noncoding	29736	G29736-	G	-	3	3	B.1.1.57	0.034483
noncoding	29736	G29736-	G	-	3	3	B.1.1.70	0.001023
noncoding	29736	G29736-	G	-	3	3	B.1.111	0.003525
noncoding	29736	G29736-	G	-	3	3	B.1.145	0.157895
noncoding	29736	G29736A	G	A	3	3	B.1.160	0.000094
noncoding	29736	G29736-	G	-	3	3	B.1.177.18	0.00348
noncoding	29736	G29736-	G	-	3	3	B.1.177.87	0.002183
noncoding	29736	G29736T	G	T	3	3	B.1.221	0.000213
noncoding	29736	G29736C	G	C	3	3	B.1.258	0.0002
noncoding	29736	G29736-	G	-	3	3	B.1.258.21	0.023256
noncoding	29736	G29736-	G	-	3	3	B.1.36.16	0.004274
noncoding	29736	G29736-	G	-	3	3	B.1.36.17	0.001482
noncoding	29736	G29736-	G	-	3	3	B.1.36.18	0.001261
noncoding	29736	G29736T	G	T	3	3	B.1.36.27	0.00229
noncoding	29736	G29736-	G	-	3	3	B.1.36.31	0.005254
noncoding	29736	G29736-	G	-	3	3	B.1.396	0.002117
noncoding	29736	G29736-	G	-	3	3	B.1.399	0.005803
noncoding	29736	G29736-	G	-	3	3	B.1.416.1	0.004687
noncoding	29736	G29736T	G	T	3	3	B.1.422	0.002437
noncoding	29736	G29736-	G	-	3	3	B.1.44	0.025
noncoding	29736	G29736-	G	-	3	3	B.1.505	0.013158
noncoding	29736	G29736C	G	C	3	3	B.1.526	0.000071
noncoding	29736	G29736T	G	T	3	3	B.1.564	0.001278
noncoding	29736	G29736-	G	-	3	3	B.1.568	0.003333
noncoding	29736	G29736T	G	T	3	3	B.1.609	0.001438
noncoding	29736	G29736T	G	T	3	3	B.1.628	0.001057
noncoding	29736	G29736-	G	-	3	3	B.39	0.006993
noncoding	29736	G29736T	G	T	3	3	C.18	0.007772
noncoding	29736	G29736T	G	T	3	3	C.36.3	0.001702
noncoding	29736	G29736C	G	C	3	3	D.2	0.000225
noncoding	29736	G29736-	G	-	3	3	P.1.17	0.000485
noncoding	29736	G29736T	G	T	3	3	Q.8	0.000495
noncoding	29736	G29736-	G	-	3	3	Q.8	0.000495
noncoding	29736	G29736T	G	T	2	2	A.2.5	0.000998
noncoding	29736	G29736-	G	-	2	2	A.23.1	0.001408
noncoding	29736	G29736-	G	-	2	2	AD.2	0.000438
noncoding	29736	G29736T	G	T	2	2	AY.1	0.000791
noncoding	29736	G29736-	G	-	2	2	AY.10	0.00106
noncoding	29736	G29736T	G	T	2	2	AY.101	0.000981
noncoding	29736	G29736T	G	T	2	2	AY.105	0.001286
noncoding	29736	G29736-	G	-	2	2	AY.106	0.00067
noncoding	29736	G29736-	G	-	2	2	AY.111	0.000366
noncoding	29736	G29736T	G	T	2	2	AY.119	0.000071
noncoding	29736	G29736C	G	C	2	2	AY.119	0.000071
noncoding	29736	G29736T	G	T	2	2	AY.16.1	0.00094
noncoding	29736	G29736-	G	-	2	2	AY.19	0.002281
noncoding	29736	G29736A	G	A	2	2	AY.24	0.000862
noncoding	29736	G29736A	G	A	2	2	AY.26	0.000057
noncoding	29736	G29736T	G	T	2	2	AY.30	0.000791
noncoding	29736	G29736T	G	T	2	2	AY.32	0.001065
noncoding	29736	G29736C	G	C	2	2	AY.34	0.000194
noncoding	29736	G29736T	G	T	2	2	AY.34.1	0.00102
noncoding	29736	G29736A	G	A	2	2	AY.37	0.000632
noncoding	29736	G29736A	G	A	2	2	AY.4.2	0.000043
noncoding	29736	G29736A	G	A	2	2	AY.45	0.000243
noncoding	29736	G29736-	G	-	2	2	AY.46.3	0.001867
noncoding	29736	G29736T	G	T	2	2	AY.46.4	0.000329
noncoding	29736	G29736C	G	C	2	2	AY.46.6	0.000144
noncoding	29736	G29736T	G	T	2	2	AY.50	0.001599
noncoding	29736	G29736C	G	C	2	2	AY.54	0.000191
noncoding	29736	G29736T	G	T	2	2	AY.55	0.001835
noncoding	29736	G29736-	G	-	2	2	AY.56	0.00321
noncoding	29736	G29736T	G	T	2	2	AY.58	0.001815
noncoding	29736	G29736T	G	T	2	2	AY.59	0.001059
noncoding	29736	G29736A	G	A	2	2	AY.6	0.000082
noncoding	29736	G29736T	G	T	2	2	AY.62	0.000871
noncoding	29736	G29736T	G	T	2	2	AY.7	0.000392
noncoding	29736	G29736A	G	A	2	2	AY.7.1	0.000225
noncoding	29736	G29736-	G	-	2	2	AY.71	0.00095
noncoding	29736	G29736C	G	C	2	2	AY.77	0.002255
noncoding	29736	G29736C	G	C	2	2	AY.82	0.002714
noncoding	29736	G29736T	G	T	2	2	AY.86	0.00166
noncoding	29736	G29736C	G	C	2	2	AY.9	0.000135
noncoding	29736	G29736-	G	-	2	2	AY.9.1	0.000167
noncoding	29736	G29736T	G	T	2	2	AY.91	0.001461
noncoding	29736	G29736-	G	-	2	2	AY.94	0.000885
noncoding	29736	G29736T	G	T	2	2	AY.95	0.001522
noncoding	29736	G29736-	G	-	2	2	AY.95	0.001522
noncoding	29736	G29736T	G	T	2	2	AY.98	0.000158
noncoding	29736	G29736T	G	T	2	2	AY.99	0.002099
noncoding	29736	G29736C	G	C	2	2	AY.99	0.002099
noncoding	29736	G29736-	G	-	2	2	B.1.1.170	0.002494
noncoding	29736	G29736T	G	T	2	2	B.1.1.189	0.003026
noncoding	29736	G29736-	G	-	2	2	B.1.1.194	0.009901
noncoding	29736	G29736T	G	T	2	2	B.1.1.237	0.010811
noncoding	29736	G29736T	G	T	2	2	B.1.1.244	0.030769
noncoding	29736	G29736-	G	-	2	2	B.1.1.275	0.022472
noncoding	29736	G29736-	G	-	2	2	B.1.1.284	0.000215
noncoding	29736	G29736A	G	A	2	2	B.1.1.297	0.004474
noncoding	29736	G29736-	G	-	2	2	B.1.1.305	0.007722
noncoding	29736	G29736-	G	-	2	2	B.1.1.348	0.001592
noncoding	29736	G29736-	G	-	2	2	B.1.1.354	0.008772
noncoding	29736	G29736T	G	T	2	2	B.1.1.369	0.000892
noncoding	29736	G29736-	G	-	2	2	B.1.1.372	0.001377
noncoding	29736	G29736T	G	T	2	2	B.1.1.39	0.001019
noncoding	29736	G29736-	G	-	2	2	B.1.1.50	0.001358
noncoding	29736	G29736-	G	-	2	2	B.1.1.526	0.007092
noncoding	29736	G29736-	G	-	2	2	B.1.1.528	0.009615
noncoding	29736	G29736-	G	-	2	2	B.1.126	0.002551
noncoding	29736	G29736-	G	-	2	2	B.1.160.32	0.008584
noncoding	29736	G29736-	G	-	2	2	B.1.177.21	0.000153
noncoding	29736	G29736C	G	C	2	2	B.1.177.21	0.000153
noncoding	29736	G29736T	G	T	2	2	B.1.177.30	0.005025
noncoding	29736	G29736-	G	-	2	2	B.1.177.32	0.002699
noncoding	29736	G29736-	G	-	2	2	B.1.177.50	0.00939
noncoding	29736	G29736-	G	-	2	2	B.1.177.73	0.001133
noncoding	29736	G29736-	G	-	2	2	B.1.177.78	0.019417
noncoding	29736	G29736C	G	C	2	2	B.1.2	0.000018
noncoding	29736	G29736-	G	-	2	2	B.1.206	0.001631
noncoding	29736	G29736T	G	T	2	2	B.1.214.3	0.014286
noncoding	29736	G29736-	G	-	2	2	B.1.23	0.012121
noncoding	29736	G29736-	G	-	2	2	B.1.258.10	0.022727
noncoding	29736	G29736-	G	-	2	2	B.1.298	0.004228
noncoding	29736	G29736-	G	-	2	2	B.1.350	0.005865
noncoding	29736	G29736A	G	A	2	2	B.1.351	0.000059
noncoding	29736	G29736-	G	-	2	2	B.1.351.3	0.001753
noncoding	29736	G29736A	G	A	2	2	B.1.36	0.000292
noncoding	29736	G29736-	G	-	2	2	B.1.36.8	0.002
noncoding	29736	G29736-	G	-	2	2	B.1.369	0.00057
noncoding	29736	G29736-	G	-	2	2	B.1.391	0.002255
noncoding	29736	G29736T	G	T	2	2	B.1.428	0.002041
noncoding	29736	G29736-	G	-	2	2	B.1.436	0.002058
noncoding	29736	G29736T	G	T	2	2	B.1.438	0.013072
noncoding	29736	G29736-	G	-	2	2	B.1.441	0.019231
noncoding	29736	G29736T	G	T	2	2	B.1.459	0.008163
noncoding	29736	G29736-	G	-	2	2	B.1.466.2	0.000782
noncoding	29736	G29736A	G	A	2	2	B.1.466.2	0.000782
noncoding	29736	G29736T	G	T	2	2	B.1.470	0.002809
noncoding	29736	G29736T	G	T	2	2	B.1.474	0.003802
noncoding	29736	G29736A	G	A	2	2	B.1.499	0.002101
noncoding	29736	G29736-	G	-	2	2	B.1.509	0.001732
noncoding	29736	G29736T	G	T	2	2	B.1.540	0.019417
noncoding	29736	G29736-	G	-	2	2	B.1.543	0.02
noncoding	29736	G29736-	G	-	2	2	B.1.561	0.000794
noncoding	29736	G29736T	G	T	2	2	B.1.561	0.000794
noncoding	29736	G29736-	G	-	2	2	B.1.577	0.001375
noncoding	29736	G29736-	G	-	2	2	B.1.597	0.009259
noncoding	29736	G29736-	G	-	2	2	B.1.617.1	0.000258
noncoding	29736	G29736A	G	A	2	2	B.1.619	0.001742
noncoding	29736	G29736T	G	T	2	2	B.1.619.1	0.001283
noncoding	29736	G29736-	G	-	2	2	B.1.620	0.001892
noncoding	29736	G29736-	G	-	2	2	B.1.628	0.000705
noncoding	29736	G29736C	G	C	2	2	B.1.637	0.000146
noncoding	29736	G29736C	G	C	2	2	B.40	0.000729
noncoding	29736	G29736T	G	T	2	2	B.6.6	0.001778
noncoding	29736	G29736T	G	T	2	2	C.35	0.001548
noncoding	29736	G29736-	G	-	2	2	C.36	0.001821
noncoding	29736	G29736-	G	-	2	2	C.38	0.016129
noncoding	29736	G29736T	G	T	2	2	N.9	0.011905
noncoding	29736	G29736-	G	-	2	2	P.1.10	0.000539
noncoding	29736	G29736-	G	-	2	2	P.1.13	0.001797
noncoding	29736	G29736A	G	A	2	2	P.1.7	0.000639
noncoding	29736	G29736T	G	T	1	1	A.2	0.000662
noncoding	29736	G29736A	G	A	1	1	A.2	0.000662
noncoding	29736	G29736-	G	-	1	1	A.2.3	0.004739
noncoding	29736	G29736-	G	-	1	1	A.2.5	0.000499
noncoding	29736	G29736-	G	-	1	1	A.30	0.142857
noncoding	29736	G29736T	G	T	1	1	A.5	0.001923
noncoding	29736	G29736T	G	T	1	1	AD.2	0.000219
noncoding	29736	G29736A	G	A	1	1	AE.4	0.043478
noncoding	29736	G29736T	G	T	1	1	AE.8	0.000489
noncoding	29736	G29736-	G	-	1	1	AH.2	0.012048
noncoding	29736	G29736-	G	-	1	1	AK.2	0.045455
noncoding	29736	G29736D	G	D	1	1	All	0
noncoding	29736	G29736W	G	W	1	1	All	0
noncoding	29736	G29736-	G	-	1	1	AU.1	0.001266
noncoding	29736	G29736A	G	A	1	1	AY.104	0.001984
noncoding	29736	G29736C	G	C	1	1	AY.105	0.000643
noncoding	29736	G29736-	G	-	1	1	AY.105	0.000643
noncoding	29736	G29736T	G	T	1	1	AY.108	0.001103
noncoding	29736	G29736-	G	-	1	1	AY.108	0.001103
noncoding	29736	G29736T	G	T	1	1	AY.109	0.00074
noncoding	29736	G29736T	G	T	1	1	AY.110	0.000113
noncoding	29736	G29736C	G	C	1	1	AY.111	0.000183
noncoding	29736	G29736T	G	T	1	1	AY.111	0.000183
noncoding	29736	G29736T	G	T	1	1	AY.116.1	0.000311
noncoding	29736	G29736A	G	A	1	1	AY.118	0.000063
noncoding	29736	G29736T	G	T	1	1	AY.12	0.000316
noncoding	29736	G29736C	G	C	1	1	AY.120	0.000037
noncoding	29736	G29736-	G	-	1	1	AY.120.1	0.000321
noncoding	29736	G29736T	G	T	1	1	AY.120.1	0.000321
noncoding	29736	G29736T	G	T	1	1	AY.120.2.1	0.000498
noncoding	29736	G29736-	G	-	1	1	AY.120.2.1	0.000498
noncoding	29736	G29736T	G	T	1	1	AY.13	0.000161
noncoding	29736	G29736T	G	T	1	1	AY.14	0.000088
noncoding	29736	G29736-	G	-	1	1	AY.16	0.00038
noncoding	29736	G29736C	G	C	1	1	AY.16	0.00038
noncoding	29736	G29736T	G	T	1	1	AY.19	0.00114
noncoding	29736	G29736T	G	T	1	1	AY.2	0.000356
noncoding	29736	G29736C	G	C	1	1	AY.20	0.000039
noncoding	29736	G29736-	G	-	1	1	AY.24	0.000431
noncoding	29736	G29736T	G	T	1	1	AY.24	0.000431
noncoding	29736	G29736C	G	C	1	1	AY.26	0.000028
noncoding	29736	G29736T	G	T	1	1	AY.27	0.000065
noncoding	29736	G29736A	G	A	1	1	AY.27	0.000065
noncoding	29736	G29736C	G	C	1	1	AY.27	0.000065
noncoding	29736	G29736T	G	T	1	1	AY.28	0.00189
noncoding	29736	G29736-	G	-	1	1	AY.29.1	0.000221
noncoding	29736	G29736C	G	C	1	1	AY.3	0.00001
noncoding	29736	G29736T	G	T	1	1	AY.31	0.018519
noncoding	29736	G29736C	G	C	1	1	AY.33	0.000067
noncoding	29736	G29736T	G	T	1	1	AY.35	0.000233
noncoding	29736	G29736A	G	A	1	1	AY.35	0.000233
noncoding	29736	G29736C	G	C	1	1	AY.36	0.000148
noncoding	29736	G29736T	G	T	1	1	AY.36	0.000148
noncoding	29736	G29736T	G	T	1	1	AY.4.2	0.000022
noncoding	29736	G29736A	G	A	1	1	AY.4.2.1	0.000149
noncoding	29736	G29736T	G	T	1	1	AY.4.2.1	0.000149
noncoding	29736	G29736A	G	A	1	1	AY.4.5	0.000107
noncoding	29736	G29736T	G	T	1	1	AY.40	0.000964
noncoding	29736	G29736A	G	A	1	1	AY.42	0.00004
noncoding	29736	G29736-	G	-	1	1	AY.48	0.000465
noncoding	29736	G29736A	G	A	1	1	AY.5.4	0.000277
noncoding	29736	G29736T	G	T	1	1	AY.52	0.000814
noncoding	29736	G29736-	G	-	1	1	AY.52	0.000814
noncoding	29736	G29736C	G	C	1	1	AY.52	0.000814
noncoding	29736	G29736C	G	C	1	1	AY.55	0.000917
noncoding	29736	G29736-	G	-	1	1	AY.55	0.000917
noncoding	29736	G29736A	G	A	1	1	AY.55	0.000917
noncoding	29736	G29736A	G	A	1	1	AY.57	0.000656
noncoding	29736	G29736C	G	C	1	1	AY.6	0.000041
noncoding	29736	G29736A	G	A	1	1	AY.60	0.000938
noncoding	29736	G29736A	G	A	1	1	AY.61	0.000105
noncoding	29736	G29736C	G	C	1	1	AY.61	0.000105
noncoding	29736	G29736A	G	A	1	1	AY.63	0.000387
noncoding	29736	G29736T	G	T	1	1	AY.65	0.000533
noncoding	29736	G29736-	G	-	1	1	AY.66	0.00107
noncoding	29736	G29736T	G	T	1	1	AY.67	0.000464
noncoding	29736	G29736T	G	T	1	1	AY.68	0.000274
noncoding	29736	G29736A	G	A	1	1	AY.69	0.000187
noncoding	29736	G29736T	G	T	1	1	AY.69	0.000187
noncoding	29736	G29736C	G	C	1	1	AY.7	0.000196
noncoding	29736	G29736T	G	T	1	1	AY.7.1	0.000113
noncoding	29736	G29736T	G	T	1	1	AY.7.2	0.000559
noncoding	29736	G29736C	G	C	1	1	AY.71	0.000475
noncoding	29736	G29736T	G	T	1	1	AY.75.1	0.00018
noncoding	29736	G29736A	G	A	1	1	AY.75.1	0.00018
noncoding	29736	G29736C	G	C	1	1	AY.78	0.001541
noncoding	29736	G29736C	G	C	1	1	AY.80	0.001129
noncoding	29736	G29736-	G	-	1	1	AY.81	0.001992
noncoding	29736	G29736C	G	C	1	1	AY.84	0.000437
noncoding	29736	G29736T	G	T	1	1	AY.85	0.000427
noncoding	29736	G29736C	G	C	1	1	AY.86	0.00083
noncoding	29736	G29736-	G	-	1	1	AY.87	0.000833
noncoding	29736	G29736T	G	T	1	1	AY.88	0.000884
noncoding	29736	G29736A	G	A	1	1	AY.88	0.000884
noncoding	29736	G29736-	G	-	1	1	AY.88	0.000884
noncoding	29736	G29736C	G	C	1	1	AY.9.2.1	0.001976
noncoding	29736	G29736-	G	-	1	1	AY.91	0.00073
noncoding	29736	G29736C	G	C	1	1	AY.92	0.000287
noncoding	29736	G29736T	G	T	1	1	AY.92	0.000287
noncoding	29736	G29736-	G	-	1	1	AY.98	0.000079
noncoding	29736	G29736C	G	C	1	1	AY.99.2	0.000092
noncoding	29736	G29736-	G	-	1	1	AZ.1	0.000867
noncoding	29736	G29736T	G	T	1	1	AZ.2	0.000821
noncoding	29736	G29736C	G	C	1	1	B	0.000128
noncoding	29736	G29736T	G	T	1	1	B.1.1.1	0.000327
noncoding	29736	G29736-	G	-	1	1	B.1.1.10	0.001115
noncoding	29736	G29736-	G	-	1	1	B.1.1.139	0.022727
noncoding	29736	G29736A	G	A	1	1	B.1.1.157	0.000913
noncoding	29736	G29736T	G	T	1	1	B.1.1.161	0.003534
noncoding	29736	G29736C	G	C	1	1	B.1.1.164	0.005155
noncoding	29736	G29736T	G	T	1	1	B.1.1.171	0.003676
noncoding	29736	G29736-	G	-	1	1	B.1.1.174	0.003378
noncoding	29736	G29736T	G	T	1	1	B.1.1.174	0.003378
noncoding	29736	G29736-	G	-	1	1	B.1.1.196	0.005714
noncoding	29736	G29736-	G	-	1	1	B.1.1.197	0.037037
noncoding	29736	G29736-	G	-	1	1	B.1.1.198	0.001468
noncoding	29736	G29736A	G	A	1	1	B.1.1.216	0.00089
noncoding	29736	G29736-	G	-	1	1	B.1.1.216	0.00089
noncoding	29736	G29736-	G	-	1	1	B.1.1.218	0.007692
noncoding	29736	G29736T	G	T	1	1	B.1.1.221	0.010101
noncoding	29736	G29736-	G	-	1	1	B.1.1.229	0.005747
noncoding	29736	G29736T	G	T	1	1	B.1.1.232	0.001815
noncoding	29736	G29736T	G	T	1	1	B.1.1.240	0.004695
noncoding	29736	G29736A	G	A	1	1	B.1.1.249	0.071429
noncoding	29736	G29736A	G	A	1	1	B.1.1.25	0.000569
noncoding	29736	G29736A	G	A	1	1	B.1.1.27	0.00565
noncoding	29736	G29736-	G	-	1	1	B.1.1.277	0.000759
noncoding	29736	G29736A	G	A	1	1	B.1.1.277	0.000759
noncoding	29736	G29736T	G	T	1	1	B.1.1.277	0.000759
noncoding	29736	G29736T	G	T	1	1	B.1.1.282	0.011628
noncoding	29736	G29736-	G	-	1	1	B.1.1.286	0.002899
noncoding	29736	G29736-	G	-	1	1	B.1.1.289	0.002083
noncoding	29736	G29736-	G	-	1	1	B.1.1.294	0.001266
noncoding	29736	G29736-	G	-	1	1	B.1.1.297	0.002237
noncoding	29736	G29736T	G	T	1	1	B.1.1.298	0.000862
noncoding	29736	G29736-	G	-	1	1	B.1.1.298	0.000862
noncoding	29736	G29736T	G	T	1	1	B.1.1.302	0.002075
noncoding	29736	G29736T	G	T	1	1	B.1.1.307	0.002532
noncoding	29736	G29736C	G	C	1	1	B.1.1.315	0.008475
noncoding	29736	G29736T	G	T	1	1	B.1.1.317	0.000412
noncoding	29736	G29736T	G	T	1	1	B.1.1.349	0.010309
noncoding	29736	G29736T	G	T	1	1	B.1.1.354	0.004386
noncoding	29736	G29736-	G	-	1	1	B.1.1.389	0.006061
noncoding	29736	G29736C	G	C	1	1	B.1.1.389	0.006061
noncoding	29736	G29736A	G	A	1	1	B.1.1.39	0.00051
noncoding	29736	G29736T	G	T	1	1	B.1.1.398	0.003226
noncoding	29736	G29736T	G	T	1	1	B.1.1.404	0.015873
noncoding	29736	G29736T	G	T	1	1	B.1.1.413	0.006897
noncoding	29736	G29736T	G	T	1	1	B.1.1.416	0.000905
noncoding	29736	G29736-	G	-	1	1	B.1.1.420	0.001006
noncoding	29736	G29736A	G	A	1	1	B.1.1.420	0.001006
noncoding	29736	G29736-	G	-	1	1	B.1.1.432	0.001266
noncoding	29736	G29736T	G	T	1	1	B.1.1.434	0.000349
noncoding	29736	G29736-	G	-	1	1	B.1.1.466	0.008696
noncoding	29736	G29736-	G	-	1	1	B.1.1.47	0.005348
noncoding	29736	G29736-	G	-	1	1	B.1.1.517	0.006803
noncoding	29736	G29736C	G	C	1	1	B.1.1.518	0.006329
noncoding	29736	G29736T	G	T	1	1	B.1.1.525	0.005464
noncoding	29736	G29736A	G	A	1	1	B.1.1.54	0.003021
noncoding	29736	G29736-	G	-	1	1	B.1.1.63	0.000386
noncoding	29736	G29736T	G	T	1	1	B.1.1.63	0.000386
noncoding	29736	G29736-	G	-	1	1	B.1.1.71	0.006061
noncoding	29736	G29736T	G	T	1	1	B.1.113	0.015625
noncoding	29736	G29736-	G	-	1	1	B.1.139	0.000733
noncoding	29736	G29736T	G	T	1	1	B.1.160.30	0.002976
noncoding	29736	G29736-	G	-	1	1	B.1.162	0.005025
noncoding	29736	G29736-	G	-	1	1	B.1.167	0.007812
noncoding	29736	G29736-	G	-	1	1	B.1.177.12	0.000152
noncoding	29736	G29736-	G	-	1	1	B.1.177.30	0.002513
noncoding	29736	G29736A	G	A	1	1	B.1.177.32	0.00135
noncoding	29736	G29736T	G	T	1	1	B.1.177.44	0.000519
noncoding	29736	G29736-	G	-	1	1	B.1.177.44	0.000519
noncoding	29736	G29736T	G	T	1	1	B.1.177.46	0.000918
noncoding	29736	G29736-	G	-	1	1	B.1.177.51	0.004566
noncoding	29736	G29736-	G	-	1	1	B.1.177.53	0.002392
noncoding	29736	G29736T	G	T	1	1	B.1.177.54	0.000606
noncoding	29736	G29736T	G	T	1	1	B.1.177.57	0.000281
noncoding	29736	G29736-	G	-	1	1	B.1.177.57	0.000281
noncoding	29736	G29736-	G	-	1	1	B.1.177.6	0.000977
noncoding	29736	G29736-	G	-	1	1	B.1.177.65	0.000665
noncoding	29736	G29736T	G	T	1	1	B.1.177.65	0.000665
noncoding	29736	G29736T	G	T	1	1	B.1.177.75	0.001041
noncoding	29736	G29736-	G	-	1	1	B.1.177.77	0.000726
noncoding	29736	G29736-	G	-	1	1	B.1.177.82	0.000477
noncoding	29736	G29736-	G	-	1	1	B.1.180	0.05
noncoding	29736	G29736T	G	T	1	1	B.1.189	0.004292
noncoding	29736	G29736-	G	-	1	1	B.1.192	0.009259
noncoding	29736	G29736T	G	T	1	1	B.1.210	0.002132
noncoding	29736	G29736-	G	-	1	1	B.1.214.2	0.0006
noncoding	29736	G29736T	G	T	1	1	B.1.22	0.001318
noncoding	29736	G29736T	G	T	1	1	B.1.221.3	0.000833
noncoding	29736	G29736-	G	-	1	1	B.1.222	0.001692
noncoding	29736	G29736T	G	T	1	1	B.1.223	0.002778
noncoding	29736	G29736T	G	T	1	1	B.1.232	0.000537
noncoding	29736	G29736-	G	-	1	1	B.1.241	0.000812
noncoding	29736	G29736A	G	A	1	1	B.1.241	0.000812
noncoding	29736	G29736-	G	-	1	1	B.1.258.16	0.001637
noncoding	29736	G29736T	G	T	1	1	B.1.279	0.000514
noncoding	29736	G29736-	G	-	1	1	B.1.291	0.019231
noncoding	29736	G29736-	G	-	1	1	B.1.320	0.001245
noncoding	29736	G29736T	G	T	1	1	B.1.325	0.006897
noncoding	29736	G29736C	G	C	1	1	B.1.335	0.010309
noncoding	29736	G29736A	G	A	1	1	B.1.336	0.002439
noncoding	29736	G29736-	G	-	1	1	B.1.336	0.002439
noncoding	29736	G29736T	G	T	1	1	B.1.344	0.008197
noncoding	29736	G29736T	G	T	1	1	B.1.346	0.001311
noncoding	29736	G29736T	G	T	1	1	B.1.351.3	0.000876
noncoding	29736	G29736T	G	T	1	1	B.1.351.5	0.0006
noncoding	29736	G29736T	G	T	1	1	B.1.356	0.001727
noncoding	29736	G29736C	G	C	1	1	B.1.36	0.000146
noncoding	29736	G29736-	G	-	1	1	B.1.36.19	0.009259
noncoding	29736	G29736A	G	A	1	1	B.1.36.20	0.016949
noncoding	29736	G29736T	G	T	1	1	B.1.36.22	0.001208
noncoding	29736	G29736A	G	A	1	1	B.1.36.31	0.001751
noncoding	29736	G29736T	G	T	1	1	B.1.36.31	0.001751
noncoding	29736	G29736T	G	T	1	1	B.1.36.36	0.000602
noncoding	29736	G29736A	G	A	1	1	B.1.36.36	0.000602
noncoding	29736	G29736-	G	-	1	1	B.1.36.37	0.002778
noncoding	29736	G29736T	G	T	1	1	B.1.36.8	0.001
noncoding	29736	G29736-	G	-	1	1	B.1.362	0.001541
noncoding	29736	G29736T	G	T	1	1	B.1.366	0.004878
noncoding	29736	G29736A	G	A	1	1	B.1.367	0.000792
noncoding	29736	G29736T	G	T	1	1	B.1.369	0.000285
noncoding	29736	G29736T	G	T	1	1	B.1.371	0.001122
noncoding	29736	G29736A	G	A	1	1	B.1.371	0.001122
noncoding	29736	G29736T	G	T	1	1	B.1.378	0.006849
noncoding	29736	G29736T	G	T	1	1	B.1.381	0.007812
noncoding	29736	G29736-	G	-	1	1	B.1.390	0.010638
noncoding	29736	G29736T	G	T	1	1	B.1.396	0.000706
noncoding	29736	G29736C	G	C	1	1	B.1.397	0.004854
noncoding	29736	G29736T	G	T	1	1	B.1.401	0.008197
noncoding	29736	G29736T	G	T	1	1	B.1.402	0.009804
noncoding	29736	G29736T	G	T	1	1	B.1.404	0.001302
noncoding	29736	G29736T	G	T	1	1	B.1.406	0.006061
noncoding	29736	G29736C	G	C	1	1	B.1.416	0.001269
noncoding	29736	G29736T	G	T	1	1	B.1.424	0.008065
noncoding	29736	G29736C	G	C	1	1	B.1.427	0.00005
noncoding	29736	G29736T	G	T	1	1	B.1.433	0.003195
noncoding	29736	G29736C	G	C	1	1	B.1.439	0.005917
noncoding	29736	G29736-	G	-	1	1	B.1.442	0.035714
noncoding	29736	G29736-	G	-	1	1	B.1.443	0.004673
noncoding	29736	G29736T	G	T	1	1	B.1.462	0.007246
noncoding	29736	G29736-	G	-	1	1	B.1.470	0.001404
noncoding	29736	G29736-	G	-	1	1	B.1.493	0.025641
noncoding	29736	G29736A	G	A	1	1	B.1.497	0.000315
noncoding	29736	G29736T	G	T	1	1	B.1.497	0.000315
noncoding	29736	G29736T	G	T	1	1	B.1.524	0.001406
noncoding	29736	G29736D	G	D	1	1	B.1.525	0.000113
noncoding	29736	G29736W	G	W	1	1	B.1.525	0.000113
noncoding	29736	G29736A	G	A	1	1	B.1.545	0.014493
noncoding	29736	G29736-	G	-	1	1	B.1.551	0.00129
noncoding	29736	G29736T	G	T	1	1	B.1.560	0.00463
noncoding	29736	G29736-	G	-	1	1	B.1.564.1	0.001577
noncoding	29736	G29736T	G	T	1	1	B.1.567	0.003333
noncoding	29736	G29736-	G	-	1	1	B.1.575	0.000303
noncoding	29736	G29736-	G	-	1	1	B.1.576	0.000907
noncoding	29736	G29736T	G	T	1	1	B.1.576	0.000907
noncoding	29736	G29736A	G	A	1	1	B.1.577	0.000687
noncoding	29736	G29736T	G	T	1	1	B.1.580	0.004065
noncoding	29736	G29736C	G	C	1	1	B.1.596	0.000087
noncoding	29736	G29736-	G	-	1	1	B.1.600	0.005848
noncoding	29736	G29736T	G	T	1	1	B.1.606	0.006024
noncoding	29736	G29736-	G	-	1	1	B.1.617.3	0.002985
noncoding	29736	G29736T	G	T	1	1	B.1.619	0.000871
noncoding	29736	G29736-	G	-	1	1	B.1.619	0.000871
noncoding	29736	G29736T	G	T	1	1	B.1.630	0.005236
noncoding	29736	G29736-	G	-	1	1	B.1.633	0.041667
noncoding	29736	G29736C	G	C	1	1	B.1.636	0.006711
noncoding	29736	G29736T	G	T	1	1	B.1.8	0.001972
noncoding	29736	G29736-	G	-	1	1	B.3	0.000831
noncoding	29736	G29736-	G	-	1	1	B.3.1	0.001658
noncoding	29736	G29736-	G	-	1	1	B.31	0.003731
noncoding	29736	G29736-	G	-	1	1	B.4.2	0.066667
noncoding	29736	G29736T	G	T	1	1	B.55	0.00295
noncoding	29736	G29736-	G	-	1	1	B.55	0.00295
noncoding	29736	G29736-	G	-	1	1	B.6	0.00091
noncoding	29736	G29736-	G	-	1	1	C.1.2	0.004255
noncoding	29736	G29736T	G	T	1	1	C.14	0.004329
noncoding	29736	G29736T	G	T	1	1	C.16	0.00106
noncoding	29736	G29736T	G	T	1	1	C.26	0.007353
noncoding	29736	G29736-	G	-	1	1	C.35	0.000774
noncoding	29736	G29736A	G	A	1	1	D.2	0.000075
noncoding	29736	G29736-	G	-	1	1	D.5	0.004975
noncoding	29736	G29736T	G	T	1	1	N.1	0.016949
noncoding	29736	G29736C	G	C	1	1	P.1	0.000016
noncoding	29736	G29736T	G	T	1	1	P.1.1	0.000318
noncoding	29736	G29736-	G	-	1	1	P.1.1	0.000318
noncoding	29736	G29736-	G	-	1	1	P.1.12	0.000484
noncoding	29736	G29736T	G	T	1	1	P.1.12	0.000484
noncoding	29736	G29736A	G	A	1	1	P.1.14	0.000048
noncoding	29736	G29736-	G	-	1	1	P.1.2	0.001156
noncoding	29736	G29736-	G	-	1	1	P.1.4	0.000977
noncoding	29736	G29736-	G	-	1	1	P.1.7	0.000319
noncoding	29736	G29736-	G	-	1	1	P.6	0.003145
noncoding	29736	G29736-	G	-	1	1	P.7	0.004367
noncoding	29736	G29736-	G	-	1	1	Q.2	0.000613
noncoding	29736	G29736-	G	-	1	1	Q.3	0.000145
noncoding	29736	G29736-	G	-	1	1	Q.7	0.001111
noncoding	29736	G29736A	G	A	1	1	Q.8	0.000165
noncoding	29736	G29736-	G	-	1	1	W.1	0.008696
noncoding	29736	G29736-	G	-	1	1	W.4	0.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.